RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C PPM1Q04081 328 aa5.46□□□□□ -1.54
SCM3YDL139C SML1Q04964 104 aa5.46□□□□□ -1.54
SCM3YDL139C YCG1Q06680 1035 aa5.46□□□□□ -1.54
SCM3YDL139C CSR1Q06705 408 aaKnown RBP5.46□□□□□ -1.54
SCM3YDL139C NEW1Q08972 1196 aaKnown RBP5.46□□□□□ -1.54
SCM3YDL139C YLL058WQ12198 575 aa5.46□□□□□ -1.54
SCM3YDL139C MAS2P11914 482 aa5.45□□□□□ -1.54
SCM3YDL139C MEF1P25039 761 aa5.45□□□□□ -1.54
SCM3YDL139C DAL2P25335 343 aa5.45□□□□□ -1.54
SCM3YDL139C RPC53P25441 422 aa5.45□□□□□ -1.54
SCM3YDL139C PER1P25625 357 aa5.45□□□□□ -1.54
SCM3YDL139C PWP2P25635 923 aaKnown RBP5.45□□□□□ -1.54
SCM3YDL139C CDC60P26637 1090 aaKnown RBP5.45□□□□□ -1.54
SCM3YDL139C TCD1P38756 429 aa5.45□□□□□ -1.54
SCM3YDL139C YTA12P40341 825 aa5.45□□□□□ -1.54
SCM3YDL139C ATG36P46983 293 aa5.45□□□□□ -1.54
SCM3YDL139C BRO1P48582 844 aa5.45□□□□□ -1.54
SCM3YDL139C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SCM3YDL139C YLR297WQ05899 129 aa5.45□□□□□ -1.54
SCM3YDL139C VAC14Q06708 880 aa5.45□□□□□ -1.54
SCM3YDL139C IES4Q08561 116 aa5.45□□□□□ -1.54
SCM3YDL139C SVS1Q12254 260 aa5.45□□□□□ -1.54
SCM3YDL139C ADE4P04046 510 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C RAD10P06838 210 aa5.44□□□□□ -1.54
SCM3YDL139C RNR1P21524 888 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C HXT1P32465 570 aa5.44□□□□□ -1.54
SCM3YDL139C MUD1P32605 298 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C THI80P35202 319 aa5.44□□□□□ -1.54
SCM3YDL139C SAP190P36123 1033 aa5.44□□□□□ -1.54
SCM3YDL139C JNM1P36224 373 aa5.44□□□□□ -1.54
SCM3YDL139C ABZ1P37254 787 aaPredicted RBP5.44□□□□□ -1.54
SCM3YDL139C MKT1P40850 830 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C CEP3P40969 608 aa5.44□□□□□ -1.54
SCM3YDL139C TFG2P41896 400 aaPredicted RBP5.44□□□□□ -1.54
SCM3YDL139C MNP1P53163 194 aaPredicted RBP5.44□□□□□ -1.54
SCM3YDL139C RTT102P53330 157 aa5.44□□□□□ -1.54
SCM3YDL139C ALF1P53904 254 aa5.44□□□□□ -1.54
SCM3YDL139C SFB2P53953 876 aa5.44□□□□□ -1.54
SCM3YDL139C SNU56Q03782 492 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C MED1Q12321 566 aa5.44□□□□□ -1.54
SCM3YDL139C YGR161W-CQ3E744 92 aa5.44□□□□□ -1.54
SCM3YDL139C YKL068W-AQ3E826 78 aa5.44□□□□□ -1.54
SCM3YDL139C NOP14Q99207 810 aaKnown RBP5.44□□□□□ -1.54
SCM3YDL139C RPS9BP05755 195 aaKnown RBP5.43□□□□□ -1.54
SCM3YDL139C STE11P23561 717 aa5.43□□□□□ -1.54
SCM3YDL139C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SCM3YDL139C APL1P27351 700 aa5.43□□□□□ -1.54
SCM3YDL139C ECM32P32644 1121 aaKnown RBP5.43□□□□□ -1.54
SCM3YDL139C REC104P33323 182 aa5.43□□□□□ -1.54
SCM3YDL139C PEX6P33760 1030 aa5.43□□□□□ -1.54
SCM3YDL139C YKL050CP35736 922 aa5.43□□□□□ -1.54
SCM3YDL139C EFM2P38347 419 aa5.43□□□□□ -1.54
SCM3YDL139C YER158CP40095 573 aa5.43□□□□□ -1.54
SCM3YDL139C YNL320WP42840 284 aa5.43□□□□□ -1.54
SCM3YDL139C FYV8P46949 817 aaKnown RBP5.43□□□□□ -1.54
SCM3YDL139C DAS1P47005 663 aa5.43□□□□□ -1.54
SCM3YDL139C ALY2P47029 1046 aa5.43□□□□□ -1.54
SCM3YDL139C NET1P47035 1189 aa5.43□□□□□ -1.54
SCM3YDL139C VTC3Q02725 835 aa5.43□□□□□ -1.54
SCM3YDL139C UGO1Q03327 502 aa5.43□□□□□ -1.54
SCM3YDL139C CEF1Q03654 590 aaPredicted RBP5.43□□□□□ -1.54
SCM3YDL139C URH1Q04179 340 aa5.43□□□□□ -1.54
SCM3YDL139C YDR222WQ04925 415 aa5.43□□□□□ -1.54
SCM3YDL139C XYL2Q07993 356 aa5.43□□□□□ -1.54
SCM3YDL139C SFI1Q12369 946 aa5.43□□□□□ -1.54
SCM3YDL139C TRM11Q12463 433 aa5.43□□□□□ -1.54
SCM3YDL139C MDM12Q92328 271 aa5.43□□□□□ -1.54
SCM3YDL139C PCK1P10963 549 aa5.42□□□□□ -1.54
SCM3YDL139C PYC1P11154 1178 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C TCP1P12612 559 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C PRP6P19735 899 aaPredicted RBP5.42□□□□□ -1.54
SCM3YDL139C RRT12P25381 491 aa5.42□□□□□ -1.54
SCM3YDL139C FUN30P31380 1131 aa5.42□□□□□ -1.54
SCM3YDL139C NIP100P33420 868 aa5.42□□□□□ -1.54
SCM3YDL139C YKR078WP36158 585 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C MRX3P38172 270 aa5.42□□□□□ -1.54
SCM3YDL139C VID24P38263 362 aa5.42□□□□□ -1.54
SCM3YDL139C YEL025CP39991 1188 aa5.42□□□□□ -1.54
SCM3YDL139C EAF5P39995 279 aa5.42□□□□□ -1.54
SCM3YDL139C GYP8P43570 497 aa5.42□□□□□ -1.54
SCM3YDL139C MIC19P43594 170 aa5.42□□□□□ -1.54
SCM3YDL139C CPR7P47103 393 aa5.42□□□□□ -1.54
SCM3YDL139C ASN1P49089 572 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C HSH155P49955 971 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C SNO2P53823 222 aa5.42□□□□□ -1.54
SCM3YDL139C TRS130Q03660 1102 aa5.42□□□□□ -1.54
SCM3YDL139C YMR114CQ04471 368 aaKnown RBP5.42□□□□□ -1.54
SCM3YDL139C POX1P13711 748 aa5.41□□□□□ -1.54
SCM3YDL139C CBF2P32504 956 aa5.41□□□□□ -1.54
SCM3YDL139C TFC4P33339 1025 aa5.41□□□□□ -1.54
SCM3YDL139C TVP38P36164 337 aa5.41□□□□□ -1.54
SCM3YDL139C APE3P37302 537 aaKnown RBP5.41□□□□□ -1.54
SCM3YDL139C AGP2P38090 596 aa5.41□□□□□ -1.54
SCM3YDL139C TVP23P38962 199 aa5.41□□□□□ -1.54
SCM3YDL139C DSS1P39112 969 aa5.41□□□□□ -1.54
SCM3YDL139C YEL075CP39972 122 aa5.41□□□□□ -1.54
SCM3YDL139C ASG1P40467 964 aa5.41□□□□□ -1.54
SCM3YDL139C TAF1P46677 1066 aa5.41□□□□□ -1.54
SCM3YDL139C PUS2P53167 370 aa5.41□□□□□ -1.54
SCM3YDL139C RIM8P53179 542 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms