RNA–Protein interactions for RNA: YCR059C

YIH1, Transcript of Negative regulator of eIF2 kinase Gcn2p, yeast

Gene YIH1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIH1	YCR059C	UTP13	Q05946	817 aa	Known RBP	11.51	□□□□□ -0.57
YIH1	YCR059C	OMS1	Q06668	471 aa		11.51	□□□□□ -0.57
YIH1	YCR059C	GPM3	Q12326	303 aa		11.51	□□□□□ -0.57
YIH1	YCR059C	HEM15	P16622	393 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	NUP60	P39705	539 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	BTT1	P40314	149 aa	Predicted RBP	11.5	□□□□□ -0.57
YIH1	YCR059C	ATM1	P40416	690 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	ALA1	P40825	983 aa	Known RBP	11.5	□□□□□ -0.57
YIH1	YCR059C	YJR079W	P47126	109 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	RTA1	P53047	317 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	ZIP2	P53061	704 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	PCL10	P53124	433 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	MPC54	Q08550	464 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	YOR223W	Q12015	292 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	LCB4	Q12246	624 aa		11.5	□□□□□ -0.57
YIH1	YCR059C	IMA3	P0CW40	589 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	IMA4	P0CW41	589 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	KAR4	P25583	335 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	URA7	P28274	579 aa	Known RBP	11.49	□□□□□ -0.57
YIH1	YCR059C	ECM13	P38195	257 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	PPE1	P38796	400 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	EDC3	P39998	551 aa	Known RBP	11.49	□□□□□ -0.57
YIH1	YCR059C	RPS10B	P46784	105 aa	Known RBP	11.49	□□□□□ -0.57
YIH1	YCR059C	RTT101	P47050	842 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	PIR3	Q03180	325 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	YMR160W	Q03823	816 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	IMA2	Q08295	589 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	AAD15	Q08361	143 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	NRT1	Q08485	598 aa		11.49	□□□□□ -0.57
YIH1	YCR059C	RPS10A	Q08745	105 aa	Predicted RBP	11.49	□□□□□ -0.57
YIH1	YCR059C	LPX1	Q12405	387 aa	Known RBP	11.49	□□□□□ -0.57
YIH1	YCR059C	ILV6	P25605	309 aa	Known RBP	11.48	□□□□□ -0.57
YIH1	YCR059C	KES1	P35844	434 aa	Known RBP	11.48	□□□□□ -0.57
YIH1	YCR059C	STB5	P38699	743 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	SFB3	P38810	929 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	UFE1	P41834	346 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	YJL132W	P47014	750 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	TAH11	P47112	604 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	YNL034W	P53963	612 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	YNL018C	P53976	612 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	SLU7	Q02775	382 aa	Known RBP	11.48	□□□□□ -0.57
YIH1	YCR059C	YPQ1	Q12010	308 aa		11.48	□□□□□ -0.57
YIH1	YCR059C	MRPL25	P23369	157 aa		11.47	□□□□□ -0.57
YIH1	YCR059C	CDC20	P26309	610 aa		11.47	□□□□□ -0.57
YIH1	YCR059C	MRS6	P32864	603 aa	Known RBP	11.47	□□□□□ -0.57
YIH1	YCR059C	OAF3	P36023	863 aa		11.47	□□□□□ -0.57
YIH1	YCR059C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
YIH1	YCR059C	TRM112	P53738	135 aa	Predicted RBP	11.47	□□□□□ -0.57
YIH1	YCR059C	KTR5	P53966	522 aa	Predicted RBP	11.47	□□□□□ -0.57
YIH1	YCR059C	MSH6	Q03834	1242 aa		11.47	□□□□□ -0.57
YIH1	YCR059C	GRX8	Q05926	109 aa		11.47	□□□□□ -0.57
YIH1	YCR059C	SPE3	Q12074	293 aa	Known RBP	11.47	□□□□□ -0.57
YIH1	YCR059C	ENO2	P00925	437 aa	Known RBP	11.46	□□□□□ -0.57
YIH1	YCR059C	TEF1	P02994	458 aa	Known RBP	11.46	□□□□□ -0.57
YIH1	YCR059C	UTR2	P32623	467 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	SEC6	P32844	805 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	PTC3	P34221	468 aa	Known RBP	11.46	□□□□□ -0.57
YIH1	YCR059C	SMF2	P38778	549 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	YAT2	P40017	923 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	SAE2	P46946	345 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	SNG1	P46950	547 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	IML2	P47031	731 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	PSP1	P50896	841 aa	Known RBP	11.46	□□□□□ -0.57
YIH1	YCR059C	TAN1	P53072	289 aa	Predicted RBP	11.46	□□□□□ -0.57
YIH1	YCR059C	DOS2	P54858	310 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	ARP9	Q05123	467 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	PIG1	Q06216	648 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	SWC7	Q06707	132 aa		11.46	□□□□□ -0.57
YIH1	YCR059C	HMG2	P12684	1045 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	PSE1	P32337	1089 aa	Known RBP	11.45	□□□□□ -0.58
YIH1	YCR059C	BST1	P43571	1029 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	COQ6	P53318	479 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	YPR003C	P53394	754 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	INP2	Q03824	705 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	ADE13	Q05911	482 aa	Known RBP	11.45	□□□□□ -0.58
YIH1	YCR059C	BSP1	Q06604	576 aa		11.45	□□□□□ -0.58
YIH1	YCR059C	ERR1	P0CX10	437 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	ERR2	P0CX11	437 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	APE1	P14904	514 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	MTF1	P14908	341 aa	Known RBP	11.44	□□□□□ -0.58
YIH1	YCR059C	GID7	P25569	745 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	PEX34	P25584	144 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	SYN8	P31377	255 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	KTR4	P38131	464 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	PEX28	P38848	579 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	ERR3	P42222	437 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	ROK1	P45818	564 aa	Predicted RBP	11.44	□□□□□ -0.58
YIH1	YCR059C	TRF5	P48561	642 aa	Known RBP	11.44	□□□□□ -0.58
YIH1	YCR059C	PRP24	P49960	444 aa	Known RBP	11.44	□□□□□ -0.58
YIH1	YCR059C	ADI1	Q03677	179 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	ENT5	Q03769	411 aa	Known RBP	11.44	□□□□□ -0.58
YIH1	YCR059C	YOR387C	Q08910	206 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	LDB17	Q12342	491 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	AFI1	Q99222	893 aa		11.44	□□□□□ -0.58
YIH1	YCR059C	ILV2	P07342	687 aa	Known RBP	11.43	□□□□□ -0.58
YIH1	YCR059C	ILS1	P09436	1072 aa	Known RBP	11.43	□□□□□ -0.58
YIH1	YCR059C	TSR4	P25040	408 aa		11.43	□□□□□ -0.58
YIH1	YCR059C	MET22	P32179	357 aa		11.43	□□□□□ -0.58
YIH1	YCR059C	KAP104	P38217	918 aa	Known RBP	11.43	□□□□□ -0.58
YIH1	YCR059C	MRX6	P48564	524 aa		11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms