RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C HSH49Q99181 213 aaPredicted RBP4.81□□□□□ -1.64
NPL4YBR170C TPK1P06244 397 aa4.8□□□□□ -1.64
NPL4YBR170C HOM3P10869 527 aa4.8□□□□□ -1.64
NPL4YBR170C SEC15P22224 910 aa4.8□□□□□ -1.64
NPL4YBR170C PGS1P25578 521 aa4.8□□□□□ -1.64
NPL4YBR170C RPS7AP26786 190 aaKnown RBP4.8□□□□□ -1.64
NPL4YBR170C KHA1P40309 873 aa4.8□□□□□ -1.64
NPL4YBR170C SIP4P46954 829 aa4.8□□□□□ -1.64
NPL4YBR170C MTL1P53214 551 aa4.8□□□□□ -1.64
NPL4YBR170C RSC1P53236 928 aa4.8□□□□□ -1.64
NPL4YBR170C BSC5P53755 489 aa4.8□□□□□ -1.64
NPL4YBR170C FDC1Q03034 503 aa4.8□□□□□ -1.64
NPL4YBR170C SPN1Q06505 410 aaPredicted RBP4.8□□□□□ -1.64
NPL4YBR170C GRC3Q07845 632 aa4.8□□□□□ -1.64
NPL4YBR170C OLE1P21147 510 aaKnown RBP4.8□□□□□ -1.64
NPL4YBR170C COS111P38308 924 aa4.8□□□□□ -1.64
NPL4YBR170C YBR225WP38321 900 aa4.8□□□□□ -1.64
NPL4YBR170C STB5P38699 743 aa4.8□□□□□ -1.64
NPL4YBR170C TPA1P40032 644 aaKnown RBP4.8□□□□□ -1.64
NPL4YBR170C ARE2P53629 642 aaKnown RBP4.8□□□□□ -1.64
NPL4YBR170C TIM50Q02776 476 aa4.8□□□□□ -1.64
NPL4YBR170C RXT3Q07458 294 aa4.8□□□□□ -1.64
NPL4YBR170C AIM6Q07716 390 aa4.8□□□□□ -1.64
NPL4YBR170C SUL2Q12325 893 aa4.8□□□□□ -1.64
NPL4YBR170C SGF29P25554 259 aa4.79□□□□□ -1.64
NPL4YBR170C KAR4P25583 335 aa4.79□□□□□ -1.64
NPL4YBR170C DCG1P32460 244 aa4.79□□□□□ -1.64
NPL4YBR170C YJR061WP40355 935 aa4.79□□□□□ -1.64
NPL4YBR170C RMD8P43620 662 aa4.79□□□□□ -1.64
NPL4YBR170C SPT20P50875 604 aa4.79□□□□□ -1.64
NPL4YBR170C RGC1Q06108 1083 aaKnown RBP4.79□□□□□ -1.64
NPL4YBR170C YFT2Q06676 274 aa4.79□□□□□ -1.64
NPL4YBR170C ZRT2Q12436 422 aa4.79□□□□□ -1.64
NPL4YBR170C RPL19AP0CX82 189 aaKnown RBP4.78□□□□□ -1.64
NPL4YBR170C RPL19BP0CX83 189 aaPredicted RBP4.78□□□□□ -1.64
NPL4YBR170C FUR1P18562 216 aaKnown RBP4.78□□□□□ -1.64
NPL4YBR170C FEN2P25621 512 aaKnown RBP4.78□□□□□ -1.64
NPL4YBR170C NOP4P37838 685 aaKnown RBP4.78□□□□□ -1.64
NPL4YBR170C NPR2P39923 615 aa4.78□□□□□ -1.64
NPL4YBR170C YIL077CP40508 320 aa4.78□□□□□ -1.64
NPL4YBR170C FKH2P41813 862 aa4.78□□□□□ -1.64
NPL4YBR170C BAP3P41815 604 aa4.78□□□□□ -1.64
NPL4YBR170C COG1P53079 417 aa4.78□□□□□ -1.64
NPL4YBR170C ERG5P54781 538 aa4.78□□□□□ -1.64
NPL4YBR170C GCN5Q03330 439 aa4.78□□□□□ -1.64
NPL4YBR170C MFB1Q04922 465 aa4.78□□□□□ -1.64
NPL4YBR170C ACK1Q07622 623 aaPredicted RBP4.78□□□□□ -1.64
NPL4YBR170C RRG1Q12167 365 aaPredicted RBP4.78□□□□□ -1.64
NPL4YBR170C SKM1Q12469 655 aa4.78□□□□□ -1.64
NPL4YBR170C SEC12P11655 471 aa4.77□□□□□ -1.65
NPL4YBR170C SPO16P17122 198 aa4.77□□□□□ -1.65
NPL4YBR170C VPS33P20795 691 aa4.77□□□□□ -1.65
NPL4YBR170C CDC20P26309 610 aa4.77□□□□□ -1.65
NPL4YBR170C SAC6P32599 642 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C NPL6P32832 435 aa4.77□□□□□ -1.65
NPL4YBR170C YKL050CP35736 922 aa4.77□□□□□ -1.65
NPL4YBR170C PLB1P39105 664 aa4.77□□□□□ -1.65
NPL4YBR170C FMP10P40098 244 aa4.77□□□□□ -1.65
NPL4YBR170C CSL4P53859 292 aaPredicted RBP4.77□□□□□ -1.65
NPL4YBR170C YDR132CQ03900 495 aa4.77□□□□□ -1.65
NPL4YBR170C SYF1Q04048 859 aaPredicted RBP4.77□□□□□ -1.65
NPL4YBR170C UTP21Q06078 939 aaPredicted RBP4.77□□□□□ -1.65
NPL4YBR170C ARR3Q06598 404 aa4.77□□□□□ -1.65
NPL4YBR170C VAM6Q07468 1049 aa4.77□□□□□ -1.65
NPL4YBR170C YLR302CO13544 120 aa4.77□□□□□ -1.65
NPL4YBR170C CTT1P06115 562 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-LR1P0C2J4 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-FP0CX61 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-GR2P0CX62 438 aa4.77□□□□□ -1.65
NPL4YBR170C PET122P10355 254 aa4.77□□□□□ -1.65
NPL4YBR170C OPI1P21957 404 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-CP25383 438 aa4.77□□□□□ -1.65
NPL4YBR170C PRE2P30656 287 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C MRP20P32387 263 aa4.77□□□□□ -1.65
NPL4YBR170C SWI3P32591 825 aa4.77□□□□□ -1.65
NPL4YBR170C VMA8P32610 256 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C BCS1P32839 456 aa4.77□□□□□ -1.65
NPL4YBR170C TRM2P33753 639 aa4.77□□□□□ -1.65
NPL4YBR170C FMO1P38866 432 aa4.77□□□□□ -1.65
NPL4YBR170C NUP60P39705 539 aa4.77□□□□□ -1.65
NPL4YBR170C LRO1P40345 661 aa4.77□□□□□ -1.65
NPL4YBR170C IST3P40565 148 aaPredicted RBP4.77□□□□□ -1.65
NPL4YBR170C GPD2P41911 440 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C ARC1P46672 376 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C COS12P53053 380 aa4.77□□□□□ -1.65
NPL4YBR170C DUO1P53168 247 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C TY2A-DR2Q03483 438 aa4.77□□□□□ -1.65
NPL4YBR170C SXM1Q04175 944 aaKnown RBP4.77□□□□□ -1.65
NPL4YBR170C YLR224WQ05947 369 aa4.77□□□□□ -1.65
NPL4YBR170C NBP2Q12163 236 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-BQ12260 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-OR2Q12293 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-DR1Q12392 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-OR1Q12439 438 aa4.77□□□□□ -1.65
NPL4YBR170C TY2A-DR3Q99303 438 aa4.77□□□□□ -1.65
NPL4YBR170C RPB2P08518 1224 aaKnown RBP4.76□□□□□ -1.65
NPL4YBR170C LAT1P12695 482 aaKnown RBP4.76□□□□□ -1.65
NPL4YBR170C CAD1P24813 409 aaKnown RBP4.76□□□□□ -1.65
NPL4YBR170C TMN3P40071 706 aa4.76□□□□□ -1.65
NPL4YBR170C TAM41P53230 385 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms