RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W ESS1P22696 170 aa7.33□□□□□ -1.24
TOD6YBL054W PTP2P29461 750 aa7.33□□□□□ -1.24
TOD6YBL054W HSP78P33416 811 aa7.33□□□□□ -1.24
TOD6YBL054W TBS1P38114 1094 aa7.33□□□□□ -1.24
TOD6YBL054W KAP104P38217 918 aaKnown RBP7.33□□□□□ -1.24
TOD6YBL054W YBR285WP38354 144 aa7.33□□□□□ -1.24
TOD6YBL054W SHU2P38957 223 aa7.33□□□□□ -1.24
TOD6YBL054W RTA1P53047 317 aa7.33□□□□□ -1.24
TOD6YBL054W FAR10Q06001 478 aa7.33□□□□□ -1.24
TOD6YBL054W DUS4Q06063 367 aa7.33□□□□□ -1.24
TOD6YBL054W KAP95Q06142 861 aaKnown RBP7.33□□□□□ -1.24
TOD6YBL054W YOR059CQ08448 450 aaKnown RBP7.33□□□□□ -1.24
TOD6YBL054W TMA46Q12000 345 aaKnown RBP7.33□□□□□ -1.24
TOD6YBL054W GLE1Q12315 538 aa7.33□□□□□ -1.24
TOD6YBL054W EMP46Q12396 444 aa7.33□□□□□ -1.24
TOD6YBL054W GSC2P40989 1895 aa7.32□□□□□ -1.24
TOD6YBL054W PAB1P04147 577 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
TOD6YBL054W IMA3P0CW40 589 aa7.32□□□□□ -1.24
TOD6YBL054W IMA4P0CW41 589 aa7.32□□□□□ -1.24
TOD6YBL054W CAD1P24813 409 aaKnown RBP7.32□□□□□ -1.24
TOD6YBL054W MRPL32P25348 183 aa7.32□□□□□ -1.24
TOD6YBL054W RPS7AP26786 190 aaKnown RBP7.32□□□□□ -1.24
TOD6YBL054W BCS1P32839 456 aa7.32□□□□□ -1.24
TOD6YBL054W CYM1P32898 989 aa7.32□□□□□ -1.24
TOD6YBL054W PIN4P34217 668 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
TOD6YBL054W CBR1P38626 284 aaKnown RBP7.32□□□□□ -1.24
TOD6YBL054W INP51P40559 946 aaKnown RBP7.32□□□□□ -1.24
TOD6YBL054W SET4P42948 560 aa7.32□□□□□ -1.24
TOD6YBL054W TRF5P48561 642 aaKnown RBP7.32□□□□□ -1.24
TOD6YBL054W MRK1P50873 501 aa7.32□□□□□ -1.24
TOD6YBL054W ORC3P54790 616 aa7.32□□□□□ -1.24
TOD6YBL054W TBF1Q02457 562 aa7.32□□□□□ -1.24
TOD6YBL054W YMR209CQ03648 457 aa7.32□□□□□ -1.24
TOD6YBL054W YML108WQ03759 105 aa7.32□□□□□ -1.24
TOD6YBL054W THI7Q05998 598 aa7.32□□□□□ -1.24
TOD6YBL054W IMA2Q08295 589 aa7.32□□□□□ -1.24
TOD6YBL054W AI5_BETAQ9ZZX0 354 aa7.32□□□□□ -1.24
TOD6YBL054W STE2D6VTK4 431 aa7.31□□□□□ -1.24
TOD6YBL054W GPA2P10823 449 aa7.31□□□□□ -1.24
TOD6YBL054W EST1P17214 699 aaPredicted RBP7.31□□□□□ -1.24
TOD6YBL054W VMA1P17255 1071 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W BUD31P25337 157 aaPredicted RBP7.31□□□□□ -1.24
TOD6YBL054W HEM12P32347 362 aaPredicted RBP7.31□□□□□ -1.24
TOD6YBL054W TMT1P32643 299 aa7.31□□□□□ -1.24
TOD6YBL054W UGP1P32861 499 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W SKG6P32900 734 aaPredicted RBP7.31□□□□□ -1.24
TOD6YBL054W MDJ1P35191 511 aa7.31□□□□□ -1.24
TOD6YBL054W MAE1P36013 669 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W YHR112CP38716 378 aa7.31□□□□□ -1.24
TOD6YBL054W SSZ1P38788 538 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W SHC1P39000 512 aa7.31□□□□□ -1.24
TOD6YBL054W PIK1P39104 1066 aa7.31□□□□□ -1.24
TOD6YBL054W FLC2P39719 783 aa7.31□□□□□ -1.24
TOD6YBL054W AST2P39945 430 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W YIL055CP40523 627 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W RRN7P40992 514 aa7.31□□□□□ -1.24
TOD6YBL054W YJL181WP46987 611 aa7.31□□□□□ -1.24
TOD6YBL054W YJR054WP47114 497 aa7.31□□□□□ -1.24
TOD6YBL054W TAM41P53230 385 aa7.31□□□□□ -1.24
TOD6YBL054W SWP1Q02795 286 aa7.31□□□□□ -1.24
TOD6YBL054W CLU1Q03690 1277 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W ARP9Q05123 467 aa7.31□□□□□ -1.24
TOD6YBL054W COA4Q05809 96 aa7.31□□□□□ -1.24
TOD6YBL054W GGA1Q06336 557 aa7.31□□□□□ -1.24
TOD6YBL054W YDL124WQ07551 312 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W WHI4Q07655 649 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W CUE5Q08412 411 aaKnown RBP7.31□□□□□ -1.24
TOD6YBL054W SGO1Q08490 590 aa7.31□□□□□ -1.24
TOD6YBL054W PCL8Q08966 492 aa7.31□□□□□ -1.24
TOD6YBL054W PSY3Q12318 242 aa7.31□□□□□ -1.24
TOD6YBL054W LDB17Q12342 491 aa7.31□□□□□ -1.24
TOD6YBL054W AVL9Q12500 764 aa7.31□□□□□ -1.24
TOD6YBL054W TRX1P22217 103 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
TOD6YBL054W GBP2P25555 427 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
TOD6YBL054W SSE2P32590 693 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W HBS1P32769 611 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W PEX5P35056 612 aa7.3□□□□□ -1.24
TOD6YBL054W STV1P37296 890 aa7.3□□□□□ -1.24
TOD6YBL054W CST26P38226 397 aa7.3□□□□□ -1.24
TOD6YBL054W YBR259WP38338 688 aa7.3□□□□□ -1.24
TOD6YBL054W FAA2P39518 744 aa7.3□□□□□ -1.24
TOD6YBL054W SEO1P39709 593 aa7.3□□□□□ -1.24
TOD6YBL054W FIS1P40515 155 aa7.3□□□□□ -1.24
TOD6YBL054W MSS2P40990 351 aa7.3□□□□□ -1.24
TOD6YBL054W CCT7P42943 550 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W TAH11P47112 604 aa7.3□□□□□ -1.24
TOD6YBL054W HSH155P49955 971 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W PSP1P50896 841 aaKnown RBP7.3□□□□□ -1.24
TOD6YBL054W GET1P53192 235 aa7.3□□□□□ -1.24
TOD6YBL054W HST2P53686 357 aa7.3□□□□□ -1.24
TOD6YBL054W YNL115CP53925 644 aa7.3□□□□□ -1.24
TOD6YBL054W FIN1Q03898 291 aa7.3□□□□□ -1.24
TOD6YBL054W URC2Q04411 772 aa7.3□□□□□ -1.24
TOD6YBL054W DYN3Q04949 312 aa7.3□□□□□ -1.24
TOD6YBL054W IWR1Q07532 353 aaPredicted RBP7.3□□□□□ -1.24
TOD6YBL054W PEX15Q08215 383 aa7.3□□□□□ -1.24
TOD6YBL054W SAM3Q08986 587 aa7.3□□□□□ -1.24
TOD6YBL054W HER1Q12276 1246 aa7.3□□□□□ -1.24
TOD6YBL054W BBP1Q12365 385 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms