RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 CCNJLQ8IV13 435 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 FAM181AQ8N9Y4 354 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 ZSCAN18Q8TBC5 510 aaPredicted RBP6.7□□□□□ -1.34
RTTN-220ENST00000640654 GTF3C2Q8WUA4 911 aaPredicted RBP6.7□□□□□ -1.34
RTTN-220ENST00000640654 KRTAP4-11Q9BYQ6 195 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 ZFYVE28Q9HCC9 887 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 ADAMTS6Q9UKP5 1117 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 POLA1P09884 1462 aaPredicted RBP6.7□□□□□ -1.34
RTTN-220ENST00000640654 CUL7Q14999 1698 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 CTTNBP2Q8WZ74 1663 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 SYNGAP1Q96PV0 1343 aa6.7□□□□□ -1.34
RTTN-220ENST00000640654 FHOD3Q2V2M9 1422 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 FYCO1Q9BQS8 1478 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 FAM13AO94988 1023 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 PRKCSHP14314 528 aaPredicted RBP6.69□□□□□ -1.34
RTTN-220ENST00000640654 RAP1GAPP47736 663 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 AOC3Q16853 763 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 ZSWIM9Q86XI8 627 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
RTTN-220ENST00000640654 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 ATXN3LQ9H3M9 355 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 MKNK2Q9HBH9 465 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 SLAIN2Q9P270 581 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 EFCAB5A4FU69 1503 aa6.69□□□□□ -1.34
RTTN-220ENST00000640654 CASKIN1Q8WXD9 1431 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 AQRO60306 1485 aaKnown RBP eCLIP6.68□□□□□ -1.34
RTTN-220ENST00000640654 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 B3GALT4O96024 378 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 GRIA4P48058 902 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 KCNMB1Q16558 191 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 PBXIP1Q96AQ6 731 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 PPP1R16BQ96T49 567 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 WDR97A6NE52 1622 aa6.68□□□□□ -1.34
RTTN-220ENST00000640654 A0A1W2PP55 124 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 ECEL1O95672 775 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 POLR3DP05423 398 aaPredicted RBP6.67□□□□□ -1.34
RTTN-220ENST00000640654 CEACAM5P06731 702 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 SLFN14P0C7P3 912 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 MESP2Q0VG99 397 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 SLC23A3Q6PIS1 610 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 FLAD1Q8NFF5 587 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 MTMR7Q9Y216 660 aa6.67□□□□□ -1.34
RTTN-220ENST00000640654 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
RTTN-220ENST00000640654 TMPRSS2O15393 492 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 CD96P40200 585 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 MLANAQ16655 118 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 SMYD4Q8IYR2 804 aaPredicted RBP6.66□□□□□ -1.34
RTTN-220ENST00000640654 SIN3AQ96ST3 1273 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 TCF12Q99081 682 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 PPP1R9AQ9ULJ8 1098 aa6.66□□□□□ -1.34
RTTN-220ENST00000640654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.66□□□□□ -1.34
RTTN-220ENST00000640654 ID3Q02535 119 aa6.65□□□□□ -1.34
RTTN-220ENST00000640654 MTMR3Q13615 1198 aa6.65□□□□□ -1.34
RTTN-220ENST00000640654 ZNF576Q9H609 170 aa6.65□□□□□ -1.34
RTTN-220ENST00000640654 CRIM1Q9NZV1 1036 aa6.65□□□□□ -1.34
RTTN-220ENST00000640654 LAMC3Q9Y6N6 1575 aa6.65□□□□□ -1.35
RTTN-220ENST00000640654 RNGTTO60942 597 aaKnown RBP6.64□□□□□ -1.35
RTTN-220ENST00000640654 TSPAN15O95858 294 aa6.64□□□□□ -1.35
RTTN-220ENST00000640654 NPR3P17342 541 aa6.64□□□□□ -1.35
RTTN-220ENST00000640654 GJD3Q8N144 294 aa6.64□□□□□ -1.35
RTTN-220ENST00000640654 SNAPC4Q5SXM2 1469 aa6.64□□□□□ -1.35
RTTN-220ENST00000640654 ABCA5Q8WWZ7 1642 aa6.64□□□□□ -1.35
RTTN-220ENST00000640654 NEFLP07196 543 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 ZNF865P0CJ78 1059 aaPredicted RBP6.63□□□□□ -1.35
RTTN-220ENST00000640654 LIG1P18858 919 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 ITIH2P19823 946 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 SF3B2Q13435 895 aaKnown RBP6.63□□□□□ -1.35
RTTN-220ENST00000640654 SAMD9Q5K651 1589 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 FMN1Q68DA7 1419 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 LILRA6Q6PI73 481 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 FGD6Q6ZV73 1430 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 TDRD9Q8NDG6 1382 aaKnown RBP6.63□□□□□ -1.35
RTTN-220ENST00000640654 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 EHD4Q9H223 541 aa6.63□□□□□ -1.35
RTTN-220ENST00000640654 GRIN2BQ13224 1484 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 GAPVD1Q14C86 1478 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 FZD6O60353 706 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 OXCT1P55809 520 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 LRRC56Q8IYG6 542 aaPredicted RBP6.62□□□□□ -1.35
RTTN-220ENST00000640654 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
RTTN-220ENST00000640654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
RTTN-220ENST00000640654 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 TIMELESSQ9UNS1 1208 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
RTTN-220ENST00000640654 MTUS2Q5JR59 1369 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 PPP1R15AO75807 674 aaPredicted RBP6.61□□□□□ -1.35
RTTN-220ENST00000640654 ITPKAP23677 461 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 CFPP27918 469 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 PTPN12Q05209 780 aaKnown RBP6.61□□□□□ -1.35
RTTN-220ENST00000640654 DDX10Q13206 875 aaKnown RBP6.61□□□□□ -1.35
RTTN-220ENST00000640654 IKZF1Q13422 519 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 KIAA0319Q5VV43 1072 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 SIAH1Q8IUQ4 282 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms