RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
RTTN-220ENST00000640654 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
RTTN-220ENST00000640654 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
RTTN-220ENST00000640654 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
RTTN-220ENST00000640654 FOXD1Q16676 465 aa20.65■□□□□ 0.9
RTTN-220ENST00000640654 MSH5O43196 834 aa19.52■□□□□ 0.72
RTTN-220ENST00000640654 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
RTTN-220ENST00000640654 PIAS4Q8N2W9 510 aaPredicted RBP19.33■□□□□ 0.68
RTTN-220ENST00000640654 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
RTTN-220ENST00000640654 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
RTTN-220ENST00000640654 ADRA2BP18089 450 aa19.07■□□□□ 0.64
RTTN-220ENST00000640654 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
RTTN-220ENST00000640654 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
RTTN-220ENST00000640654 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
RTTN-220ENST00000640654 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
RTTN-220ENST00000640654 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
RTTN-220ENST00000640654 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
RTTN-220ENST00000640654 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
RTTN-220ENST00000640654 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
RTTN-220ENST00000640654 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
RTTN-220ENST00000640654 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
RTTN-220ENST00000640654 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
RTTN-220ENST00000640654 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
RTTN-220ENST00000640654 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
RTTN-220ENST00000640654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
RTTN-220ENST00000640654 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
RTTN-220ENST00000640654 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
RTTN-220ENST00000640654 CAPN15O75808 1086 aa15.56■□□□□ 0.08
RTTN-220ENST00000640654 KCNA4P22459 653 aa15.55■□□□□ 0.08
RTTN-220ENST00000640654 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
RTTN-220ENST00000640654 DSG3P32926 999 aa15.43■□□□□ 0.06
RTTN-220ENST00000640654 APLP2Q06481 763 aa15.39■□□□□ 0.05
RTTN-220ENST00000640654 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
RTTN-220ENST00000640654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
RTTN-220ENST00000640654 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
RTTN-220ENST00000640654 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
RTTN-220ENST00000640654 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
RTTN-220ENST00000640654 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
RTTN-220ENST00000640654 ABCB7O75027 752 aa15.12■□□□□ 0.01
RTTN-220ENST00000640654 POTEHQ6S545 545 aa15.11■□□□□ 0.01
RTTN-220ENST00000640654 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
RTTN-220ENST00000640654 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
RTTN-220ENST00000640654 POLA2Q14181 598 aa14.75□□□□□ -0.05
RTTN-220ENST00000640654 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
RTTN-220ENST00000640654 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
RTTN-220ENST00000640654 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
RTTN-220ENST00000640654 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
RTTN-220ENST00000640654 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
RTTN-220ENST00000640654 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
RTTN-220ENST00000640654 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
RTTN-220ENST00000640654 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
RTTN-220ENST00000640654 ZBTB22O15209 634 aa14.22□□□□□ -0.13
RTTN-220ENST00000640654 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
RTTN-220ENST00000640654 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
RTTN-220ENST00000640654 FBLN2P98095 1184 aa14.1□□□□□ -0.15
RTTN-220ENST00000640654 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
RTTN-220ENST00000640654 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
RTTN-220ENST00000640654 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
RTTN-220ENST00000640654 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
RTTN-220ENST00000640654 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
RTTN-220ENST00000640654 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
RTTN-220ENST00000640654 HAX1O00165 279 aa13.97□□□□□ -0.17
RTTN-220ENST00000640654 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
RTTN-220ENST00000640654 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
RTTN-220ENST00000640654 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
RTTN-220ENST00000640654 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
RTTN-220ENST00000640654 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
RTTN-220ENST00000640654 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
RTTN-220ENST00000640654 EVX2Q03828 476 aa13.63□□□□□ -0.23
RTTN-220ENST00000640654 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
RTTN-220ENST00000640654 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
RTTN-220ENST00000640654 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
RTTN-220ENST00000640654 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
RTTN-220ENST00000640654 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
RTTN-220ENST00000640654 GABBR2O75899 941 aa13.4□□□□□ -0.26
RTTN-220ENST00000640654 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
RTTN-220ENST00000640654 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
RTTN-220ENST00000640654 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
RTTN-220ENST00000640654 CLCN6P51797 869 aa13.24□□□□□ -0.29
RTTN-220ENST00000640654 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
RTTN-220ENST00000640654 LHX8Q68G74 356 aa13.21□□□□□ -0.29
RTTN-220ENST00000640654 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
RTTN-220ENST00000640654 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
RTTN-220ENST00000640654 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
RTTN-220ENST00000640654 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
RTTN-220ENST00000640654 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
RTTN-220ENST00000640654 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
RTTN-220ENST00000640654 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
RTTN-220ENST00000640654 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
RTTN-220ENST00000640654 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
RTTN-220ENST00000640654 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
RTTN-220ENST00000640654 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
RTTN-220ENST00000640654 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
RTTN-220ENST00000640654 PROM2Q8N271 834 aa12.71□□□□□ -0.37
RTTN-220ENST00000640654 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
RTTN-220ENST00000640654 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
RTTN-220ENST00000640654 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
RTTN-220ENST00000640654 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
RTTN-220ENST00000640654 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
RTTN-220ENST00000640654 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms