RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 C4orf17Q53FE4 359 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 PANK1Q8TE04 598 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 RAPGEF4Q8WZA2 1011 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 FRAT1Q92837 279 aaPredicted RBP7.22□□□□□ -1.25
CHKA-208ENST00000533910 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
CHKA-208ENST00000533910 NIF3L1Q9GZT8 377 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 TSPYL4Q9UJ04 414 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 TNNQ9UQP3 1299 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 BCS1LQ9Y276 419 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 ABCC4O15439 1325 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 HEG1Q9ULI3 1381 aa7.21□□□□□ -1.25
CHKA-208ENST00000533910 IPO8O15397 1037 aaKnown RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 RNMTO43148 476 aaKnown RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 TREHO43280 583 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 TATP17735 454 aaPredicted RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 TAF7Q15545 349 aaPredicted RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 KRT24Q2M2I5 525 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 C1orf141Q5JVX7 400 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 DZIP1LQ8IYY4 767 aaKnown RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 NBPF15Q8N660 670 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 CARD10Q9BWT7 1032 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 GRIP2Q9C0E4 1043 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 POLMQ9NP87 494 aaPredicted RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 NOB1Q9ULX3 412 aaKnown RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 USP20Q9Y2K6 914 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 PXDNLA1KZ92 1463 aa7.21□□□□□ -1.26
CHKA-208ENST00000533910 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.26
CHKA-208ENST00000533910 TOM1O60784 492 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 PPFIA3O75145 1194 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 HOXB7P09629 217 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 PHKG2P15735 406 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 ZAP70P43403 619 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 HIRAP54198 1017 aaPredicted RBP7.2□□□□□ -1.26
CHKA-208ENST00000533910 PLCB3Q01970 1234 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 POU4F2Q12837 409 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 DSC3Q14574 896 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 RTN1Q16799 776 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.2□□□□□ -1.26
CHKA-208ENST00000533910 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 FTSJ3Q8IY81 847 aaKnown RBP7.2□□□□□ -1.26
CHKA-208ENST00000533910 ZNF280CQ8ND82 737 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 RHBDD1Q8TEB9 315 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
CHKA-208ENST00000533910 SLIT2O94813 1529 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 TTLL8A6PVC2 850 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 ELL2O00472 640 aaPredicted RBP7.19□□□□□ -1.26
CHKA-208ENST00000533910 EHHADHQ08426 723 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 ALKBH2Q6NS38 261 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 MPRIPQ6WCQ1 1025 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 CENPQQ7L2Z9 268 aaPredicted RBP7.19□□□□□ -1.26
CHKA-208ENST00000533910 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 IFNL2Q8IZJ0 200 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 C7orf43Q8WVR3 580 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 HSH2DQ96JZ2 352 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
CHKA-208ENST00000533910 MIS18AQ9NYP9 233 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 DNMT3LQ9UJW3 386 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 DDX19BQ9UMR2 479 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 ITGB4P16144 1822 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 PTPRCP08575 1304 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 PCDH11XQ9BZA7 1347 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 PCDH11YQ9BZA8 1340 aa7.19□□□□□ -1.26
CHKA-208ENST00000533910 CYP27B1O15528 508 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 RECKO95980 971 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 PDGFAP04085 211 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 HSP90AB1P08238 724 aaKnown RBP7.18□□□□□ -1.26
CHKA-208ENST00000533910 RHOQP17081 205 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
CHKA-208ENST00000533910 EIF4A1P60842 406 aaKnown RBP7.18□□□□□ -1.26
CHKA-208ENST00000533910 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHKA-208ENST00000533910 TEFQ10587 303 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 TSNAXIP1Q2TAA8 658 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 TAF7LQ5H9L4 462 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 GNASQ5JWF2 1037 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 TOM1L2Q6ZVM7 507 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 TMEM57Q8N5G2 664 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 FAM129BQ96TA1 746 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 DOT1LQ8TEK3 1739 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 TNS2Q63HR2 1409 aa7.18□□□□□ -1.26
CHKA-208ENST00000533910 KCPQ6ZWJ8 1503 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 CICQ96RK0 1608 aaPredicted RBP7.17□□□□□ -1.26
CHKA-208ENST00000533910 LDHBP07195 334 aaKnown RBP7.17□□□□□ -1.26
CHKA-208ENST00000533910 IL2RBP14784 551 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 GTF2E1P29083 439 aaPredicted RBP7.17□□□□□ -1.26
CHKA-208ENST00000533910 RNF144AP50876 292 aaPredicted RBP7.17□□□□□ -1.26
CHKA-208ENST00000533910 C9orf131Q5VYM1 1079 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 RHPN1Q8TCX5 695 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 DUSP9Q99956 384 aaKnown RBP7.17□□□□□ -1.26
CHKA-208ENST00000533910 BACH2Q9BYV9 841 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 SLC52A2Q9HAB3 445 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 JCADQ9P266 1359 aa7.17□□□□□ -1.26
CHKA-208ENST00000533910 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 UBAP1LF5GYI3 381 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms