RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CYP27B1O15528 508 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 TCP10Q12799 353 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 TIGD1Q96MW7 591 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 COA1Q9GZY4 146 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 SPAG1Q07617 926 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 MED14O60244 1454 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
AMBRA1-211ENST00000533727 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 PPP1R2P41236 205 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 USP14P54578 494 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 HAUS3Q68CZ6 603 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 TCHPQ9BT92 498 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 FAM107BQ9H098 131 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 SHTN1A0MZ66 631 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 FAM13AO94988 1023 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 MAP3K9P80192 1104 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 HS2ST1Q7LGA3 356 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 KIAA1328Q86T90 577 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 GREM2Q9H772 168 aa12.77□□□□□ -0.36
AMBRA1-211ENST00000533727 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 COL15A1P39059 1388 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 SYKP43405 635 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 LLPHQ9BRT6 129 aaKnown RBP12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 CRACR2AQ9BSW2 395 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 FAM193AP78312 1265 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 PRKG1Q13976 671 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 KRT25Q7Z3Z0 450 aa12.77□□□□□ -0.37
AMBRA1-211ENST00000533727 GYG1P46976 350 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 B4E1Z4 1266 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 BTDP43251 543 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 SSR1P43307 286 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 STX1AQ16623 288 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 PHACTR2O75167 634 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 SPATA31A1Q5TZJ5 1347 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 PNMA6EA0A0J9YXQ4 647 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 TNNT1P13805 278 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■□□□□ 11
AMBRA1-211ENST00000533727 ADCY7P51828 1080 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
AMBRA1-211ENST00000533727 E9PCH4 1651 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 OSBPP22059 807 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 UBE2HP62256 183 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 MCF2L2Q86YR7 1114 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 FERMT1Q9BQL6 677 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 PSMA7O14818 248 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 YEATS4O95619 227 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 TICAM2Q86XR7 235 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 FMNL3Q8IVF7 1028 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 TFAP4Q01664 338 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 APOBRQ0VD83 1088 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 PTPRUQ92729 1446 aa12.75□□□□□ -0.37
AMBRA1-211ENST00000533727 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 M0QZ92 97 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 PPARAQ07869 468 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 PDE6AP16499 860 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 GPATCH11Q8N954 259 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 SNX21Q969T3 373 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 CPS1P31327 1500 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
AMBRA1-211ENST00000533727 PLCD1P51178 756 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms