RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 DDB1Q16531 1140 aa16.41■□□□□ 0.22
COL9A2-207ENST00000482722 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
COL9A2-207ENST00000482722 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
COL9A2-207ENST00000482722 CYP19A1P11511 503 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-207ENST00000482722 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-207ENST00000482722 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 PSD3Q9NYI0 1048 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 SERPINC1P01008 464 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 SCARF1Q14162 830 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
COL9A2-207ENST00000482722 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 C8orf37Q96NL8 207 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
COL9A2-207ENST00000482722 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-207ENST00000482722 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 ACTN2P35609 894 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 PFKFB1P16118 471 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 TMEM139Q8IV31 216 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
COL9A2-207ENST00000482722 IKBKBO14920 756 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 CPLX1O14810 134 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-207ENST00000482722 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 ZAP70P43403 619 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 FCHSD1Q86WN1 690 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 VSTM4Q8IW00 320 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 GREM2Q9H772 168 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 ITGB4P16144 1822 aa16.38■□□□□ 0.21
COL9A2-207ENST00000482722 LAMA4Q16363 1823 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 PRC1O43663 620 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
COL9A2-207ENST00000482722 RXRAP19793 462 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 IMMTQ16891 758 aaKnown RBP16.37■□□□□ 0.21
COL9A2-207ENST00000482722 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 DHX58Q96C10 678 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 AGXT2Q9BYV1 514 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
COL9A2-207ENST00000482722 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
COL9A2-207ENST00000482722 ARHGAP6O43182 974 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 FGAP02671 866 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 GOLGA1Q92805 767 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 KIFC2Q96AC6 838 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-207ENST00000482722 VPS18Q9P253 973 aa16.37■□□□□ 0.21
COL9A2-207ENST00000482722 MAP2K7O14733 419 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 PNOCQ13519 176 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
COL9A2-207ENST00000482722 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 TXLNAP40222 546 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 FOXR1Q6PIV2 292 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
COL9A2-207ENST00000482722 PDE11AQ9HCR9 933 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 UTRNP46939 3433 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 UBAP1LF5GYI3 381 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 APPP05067 770 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 AXDND1Q5T1B0 1012 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-207ENST00000482722 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 PDILTQ8N807 584 aa16.36■□□□□ 0.21
COL9A2-207ENST00000482722 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 BCL9O00512 1426 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 CCDC151A5D8V7 595 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 ITPK1Q13572 414 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 MCM6Q14566 821 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 MYL5Q02045 173 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 GIGYF2Q6Y7W6 1299 aaKnown RBP16.35■□□□□ 0.21
COL9A2-207ENST00000482722 NGLY1Q96IV0 654 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 BAG1Q99933 345 aaPredicted RBP16.35■□□□□ 0.21
COL9A2-207ENST00000482722 INTS13Q9NVM9 706 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 FANCLQ9NW38 375 aa16.35■□□□□ 0.21
COL9A2-207ENST00000482722 FOXP2O15409 715 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 SYKP43405 635 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 GTF2A1P52655 376 aaPredicted RBP16.34■□□□□ 0.21
COL9A2-207ENST00000482722 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms