RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 VIL1P09327 827 aaKnown RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 PPARAQ07869 468 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 ST3GAL1Q11201 340 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 BECN1Q14457 450 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 APOBEC3HQ6NTF7 200 aaKnown RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 CDC42EP5Q6NZY7 148 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 CYB5R4Q7L1T6 521 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 MB21D2Q8IYB1 491 aaPredicted RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 TEX11Q8IYF3 940 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 VPS33BQ9H267 617 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 DDX4Q9NQI0 724 aaKnown RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 PDRG1Q9NUG6 133 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 SAP30BPQ9UHR5 308 aaKnown RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 CTNNA3Q9UI47 895 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 CYP46A1Q9Y6A2 500 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 FLT1P17948 1338 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 B4E1Z4 1266 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 USP17L12C9JPN9 530 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 USP17L21D6R901 530 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 ST18O60284 1047 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 IGSF3O75054 1194 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 WDHD1O75717 1129 aaPredicted RBP10.54□□□□□ -0.72
SMC6-204ENST00000428868 USP5P45974 858 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 CACNB3P54284 484 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 EXOSC10Q01780 885 aaKnown RBP10.54□□□□□ -0.72
SMC6-204ENST00000428868 KRT32Q14532 448 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 CIAPIN1Q6FI81 312 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
SMC6-204ENST00000428868 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 TEKT1Q969V4 418 aa10.54□□□□□ -0.72
SMC6-204ENST00000428868 NOL10Q9BSC4 688 aaKnown RBP10.54□□□□□ -0.72
SMC6-204ENST00000428868 BAG3O95817 575 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 SLURP2P0DP57 97 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 PSMA5P28066 241 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 NFIAQ12857 509 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 PICALMQ13492 652 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 CFAP100Q494V2 611 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 Q6ZUG5 572 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 ZFPM1Q8IX07 1006 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 DYNLL2Q96FJ2 89 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 TMX3Q96JJ7 454 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 ZDHHC15Q96MV8 337 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 NACAP1Q9BZK3 213 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 SENP2Q9HC62 589 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 MCM9Q9NXL9 1143 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
SMC6-204ENST00000428868 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
SMC6-204ENST00000428868 FZD9O00144 591 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 PRDM1O75626 825 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 EGFRP00533 1210 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 PLCD1P51178 756 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 RBM5P52756 815 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC6-204ENST00000428868 RRP12Q5JTH9 1297 aaKnown RBP10.52□□□□□ -0.73
SMC6-204ENST00000428868 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 SLC44A5Q8NCS7 719 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 PRMT6Q96LA8 375 aaPredicted RBP10.52□□□□□ -0.73
SMC6-204ENST00000428868 SLKQ9H2G2 1235 aaPredicted RBP10.52□□□□□ -0.73
SMC6-204ENST00000428868 TDRD3Q9H7E2 651 aaKnown RBP10.52□□□□□ -0.73
SMC6-204ENST00000428868 SERPINA10Q9UK55 444 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 TPCN1Q9ULQ1 816 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC6-204ENST00000428868 MYO3BQ8WXR4 1341 aa10.52□□□□□ -0.73
SMC6-204ENST00000428868 CEP350Q5VT06 3117 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 BAZ2BQ9UIF8 2168 aaKnown RBP10.51□□□□□ -0.73
SMC6-204ENST00000428868 PRC1O43663 620 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 KDM4AO75164 1064 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
SMC6-204ENST00000428868 APOBRQ0VD83 1088 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 ME3Q16798 604 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 SBK1Q52WX2 424 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 C12orf60Q5U649 245 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
SMC6-204ENST00000428868 NECAB1Q8N987 351 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 NCOA7Q8NI08 942 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 BRF1Q92994 677 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 ZKSCAN3Q9BRR0 538 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 ALDH8A1Q9H2A2 487 aaPredicted RBP10.51□□□□□ -0.73
SMC6-204ENST00000428868 ARPP21Q9UBL0 812 aaPredicted RBP10.51□□□□□ -0.73
SMC6-204ENST00000428868 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 OTOFQ9HC10 1997 aa10.51□□□□□ -0.73
SMC6-204ENST00000428868 SCN4AP35499 1836 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 CLRN2A0PK11 232 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 FGRP09769 529 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 PLCG2P16885 1265 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 LMNB1P20700 586 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 GMPSP49915 693 aaPredicted RBP10.5□□□□□ -0.73
SMC6-204ENST00000428868 CUL4AQ13619 759 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 SH3BP5LQ7L8J4 393 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 RALYLQ86SE5 291 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms