RNA–Protein interactions for RNA: ENST00000423615.6

VNN3-206, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-206ENST00000423615 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
VNN3-206ENST00000423615 TGFBRAP1Q8WUH2 860 aa12.44□□□□□ -0.42
VNN3-206ENST00000423615 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
VNN3-206ENST00000423615 PDRG1Q9NUG6 133 aa12.44□□□□□ -0.42
VNN3-206ENST00000423615 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
VNN3-206ENST00000423615 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 WDHD1O75717 1129 aaPredicted RBP12.43□□□□□ -0.42
VNN3-206ENST00000423615 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 ANTXR2P58335 489 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 HDLBPQ00341 1268 aaKnown RBP12.43□□□□□ -0.42
VNN3-206ENST00000423615 PICALMQ13492 652 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 CFAP100Q494V2 611 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 CDC42EP5Q6NZY7 148 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 RALYLQ86SE5 291 aaKnown RBP12.43□□□□□ -0.42
VNN3-206ENST00000423615 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 STAG1Q8WVM7 1258 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 ZDHHC15Q96MV8 337 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
VNN3-206ENST00000423615 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
VNN3-206ENST00000423615 ANAPC4Q9UJX5 808 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 SERPINA10Q9UK55 444 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 ATAD5Q96QE3 1844 aa12.43□□□□□ -0.42
VNN3-206ENST00000423615 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
VNN3-206ENST00000423615 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 B4E1Z4 1266 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 USP17L21D6R901 530 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 FZD9O00144 591 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 LARGE1O95461 756 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 LMNB1P20700 586 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
VNN3-206ENST00000423615 TOB2Q14106 344 aaPredicted RBP12.42□□□□□ -0.42
VNN3-206ENST00000423615 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 AGBL3Q8NEM8 1001 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 NCOA7Q8NI08 942 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
VNN3-206ENST00000423615 MCM2P49736 904 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 CACNB3P54284 484 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
VNN3-206ENST00000423615 NFIAQ12857 509 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 Q6ZUG5 572 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 CYB5R4Q7L1T6 521 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 CHST3Q7LGC8 479 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
VNN3-206ENST00000423615 USP40Q9NVE5 1235 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
VNN3-206ENST00000423615 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
VNN3-206ENST00000423615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
VNN3-206ENST00000423615 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 PRC1O43663 620 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 TRDNQ13061 729 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 TNIP1Q15025 636 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
VNN3-206ENST00000423615 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
VNN3-206ENST00000423615 WDR19Q8NEZ3 1342 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 KDM4AO75164 1064 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 PRDM1O75626 825 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
VNN3-206ENST00000423615 MFSD6Q6ZSS7 791 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 AMOTL1Q8IY63 956 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 SLC44A5Q8NCS7 719 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 BRF1Q92994 677 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 MRIQ9BWK5 157 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 ALDH8A1Q9H2A2 487 aaPredicted RBP12.39□□□□□ -0.43
VNN3-206ENST00000423615 RNF41Q9H4P4 317 aaPredicted RBP12.39□□□□□ -0.43
VNN3-206ENST00000423615 TDRD3Q9H7E2 651 aaKnown RBP12.39□□□□□ -0.43
VNN3-206ENST00000423615 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 GPHNQ9NQX3 736 aaPredicted RBP12.39□□□□□ -0.43
VNN3-206ENST00000423615 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
VNN3-206ENST00000423615 CLRN2A0PK11 232 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
VNN3-206ENST00000423615 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
VNN3-206ENST00000423615 MCM5P33992 734 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 PLCD1P51178 756 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
VNN3-206ENST00000423615 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
VNN3-206ENST00000423615 IDI2Q9BXS1 227 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 AGXT2Q9BYV1 514 aa12.38□□□□□ -0.43
VNN3-206ENST00000423615 KRT23Q9C075 422 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms