RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm28047Q3US59 414 aa26.73■■□□□ 1.87
Cln6-201ENSMUST00000034776 Mum1l1Q4VA55 681 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Snx13Q6PHS6 957 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 QarsQ8BML9 775 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Rtn1Q8K0T0 780 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Kif3aP28741 701 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Tmed8Q3UHI4 326 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Pcsk7Q61139 770 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Pus7lQ8CE46 702 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Yeats4Q9CR11 227 aaKnown RBP26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Snw1Q9CSN1 536 aaKnown RBP26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Ccdc39Q9D5Y1 937 aa26.72■■□□□ 1.87
Cln6-201ENSMUST00000034776 Tcof1O08784 1320 aaKnown RBP26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Dnm1P39053 867 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Best3Q6H1V1 669 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Ttll4Q80UG8 1193 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Ttc27Q8CD92 847 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Ccer1Q9CQL2 403 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Kansl3A2RSY1 903 aaKnown RBP26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 AU015836B2RUM3 263 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Ccdc162pQ0VG85 912 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 CerkQ8K4Q7 531 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Trmt44Q9D2Q2 713 aa26.71■■□□□ 1.87
Cln6-201ENSMUST00000034776 Mctp1E9PV86 951 aa26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 U2af2P26369 475 aaKnown RBP26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 Usp25P57080 1055 aa26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 Atp1a3Q6PIC6 1013 aa26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 Sh3bgrQ9WUZ7 214 aa26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 Rbm6S4R1W5 1118 aaKnown RBP26.7■■□□□ 1.86
Cln6-201ENSMUST00000034776 Ces1hD3Z298 562 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Tyro3P55144 880 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Ppp4cP97470 307 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Ppp2r5bQ6PD28 497 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Jdp2P97875 163 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Glis3Q6XP49 780 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Sec62Q8BU14 398 aaKnown RBP26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Wasf1Q8R5H6 559 aa26.69■■□□□ 1.86
Cln6-201ENSMUST00000034776 Stk38Q91VJ4 465 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Col4a5Q63ZW6 1691 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Pramel3A2AHA7 463 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Gm7903A2AWL1 463 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 AV320801A2AWL3 467 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Gm15023L7MUB4 467 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Epha2Q03145 977 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Gpatch3Q8BIY1 525 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 CrebrfQ8CDG5 640 aaKnown RBP26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Stk39Q9Z1W9 556 aa26.68■■□□□ 1.86
Cln6-201ENSMUST00000034776 Cplx1P63040 134 aa26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Sptlc2P97363 560 aaKnown RBP26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Slc44a4Q91VA1 707 aa26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Utp3Q9JI13 469 aaKnown RBP26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Tulp1Q9Z273 543 aa26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Togaram1Q6A070 1776 aaKnown RBP26.67■■□□□ 1.86
Cln6-201ENSMUST00000034776 Prr16A3KMN5 304 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Tbc1d5Q80XQ2 815 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Nfe2l3Q9WTM4 660 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Nup188Q6ZQH8 1759 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Cep131Q62036 1060 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Vps37dQ810I0 261 aa26.66■■□□□ 1.86
Cln6-201ENSMUST00000034776 Tbc1d8bA3KGB4 1114 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Wdhd1P59328 1117 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Rpusd2Q149F1 553 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Evc2Q8K1G2 1220 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Stn1Q8K2X3 378 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Ccdc173A0JLY1 547 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Msl1Q6PDM1 616 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Plcd3Q8K2J0 785 aa26.65■■□□□ 1.86
Cln6-201ENSMUST00000034776 Zbtb21E9Q444 1094 aa26.64■■□□□ 1.86
Cln6-201ENSMUST00000034776 WdpcpQ8C456 722 aa26.64■■□□□ 1.86
Cln6-201ENSMUST00000034776 Fez1Q8K0X8 392 aa26.64■■□□□ 1.86
Cln6-201ENSMUST00000034776 Eif4enif1Q9EST3 983 aaKnown RBP26.64■■□□□ 1.86
Cln6-201ENSMUST00000034776 Slc1a4O35874 532 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Fhdc1Q3ULZ2 1149 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Fxr1Q61584 677 aaKnown RBP26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Kif1bpQ6ZPU9 617 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Gdf11Q9Z1W4 405 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Rrp1P56183 494 aaKnown RBP26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 NenfQ9CQ45 171 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Erich6bQ9D4S6 220 aa26.63■■□□□ 1.85
Cln6-201ENSMUST00000034776 Clec11aO88200 328 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 TbcaP48428 108 aaKnown RBP26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Hook1Q8BIL5 728 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Pcdhb15Q91Y04 786 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Cep89Q9CZX2 791 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Gm43638A0A0J9YU36 694 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Nmt2O70311 529 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Dok7Q18PE0 504 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Glg1Q61543 1175 aaKnown RBP26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Hps3Q91VB4 1002 aa26.62■■□□□ 1.85
Cln6-201ENSMUST00000034776 Zkscan7E9PVW1 718 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Calm1P0DP26 149 aaKnown RBP26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Calm2P0DP27 149 aaKnown RBP26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Calm3P0DP28 149 aaKnown RBP26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 AsnsQ61024 561 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Polr3gQ6NXY9 223 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Kcnj14Q8JZN3 434 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Tbc1d23Q8K0F1 684 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Sned1Q70E20 1403 aa26.61■■□□□ 1.85
Cln6-201ENSMUST00000034776 Aox4Q3TYQ9 1336 aa26.6■■□□□ 1.85
Cln6-201ENSMUST00000034776 CebpaP53566 359 aa26.6■■□□□ 1.85
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms