RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G TY1B-NL1Q12112 1755 aa6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-GR1Q12141 1755 aa6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-BLQ12490 1755 aa6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TOP2P06786 1428 aaKnown RBP6.17□□□□□ -1.42
tC(GCA)GtC(GCA)G RPO21P04050 1733 aaKnown RBP6.16□□□□□ -1.42
tC(GCA)GtC(GCA)G SSN2P38931 1420 aa6.16□□□□□ -1.42
tC(GCA)GtC(GCA)G SPO14P36126 1683 aa6.15□□□□□ -1.42
tC(GCA)GtC(GCA)G PDR15Q04182 1529 aaKnown RBP6.13□□□□□ -1.43
tC(GCA)GtC(GCA)G SPP41P38904 1435 aa6.1□□□□□ -1.43
tC(GCA)GtC(GCA)G ULS1Q08562 1619 aa6.1□□□□□ -1.43
tC(GCA)GtC(GCA)G DNF3Q12674 1656 aa6.07□□□□□ -1.44
tC(GCA)GtC(GCA)G VTH1P40438 1549 aa6.05□□□□□ -1.44
tC(GCA)GtC(GCA)G VTH2P40890 1549 aa6.05□□□□□ -1.44
tC(GCA)GtC(GCA)G TSC11P40061 1430 aa6.05□□□□□ -1.44
tC(GCA)GtC(GCA)G GLN1P32288 370 aaKnown RBP6.04□□□□□ -1.44
tC(GCA)GtC(GCA)G ARO1P08566 1588 aaKnown RBP6.03□□□□□ -1.44
tC(GCA)GtC(GCA)G SNT2P53127 1403 aa6.02□□□□□ -1.45
tC(GCA)GtC(GCA)G USO1P25386 1790 aa6.02□□□□□ -1.45
tC(GCA)GtC(GCA)G PDR10P51533 1564 aa6.01□□□□□ -1.45
tC(GCA)GtC(GCA)G MET10P39692 1035 aa6□□□□□ -1.45
tC(GCA)GtC(GCA)G TRM3Q07527 1436 aa5.98□□□□□ -1.45
tC(GCA)GtC(GCA)G SMC4Q12267 1418 aa5.96□□□□□ -1.46
tC(GCA)GtC(GCA)G IQG1Q12280 1495 aa5.95□□□□□ -1.46
tC(GCA)GtC(GCA)G YOR1P53049 1477 aa5.94□□□□□ -1.46
tC(GCA)GtC(GCA)G GDB1Q06625 1536 aa5.94□□□□□ -1.46
tC(GCA)GtC(GCA)G MAK10Q02197 733 aa5.93□□□□□ -1.46
tC(GCA)GtC(GCA)G SNQ2P32568 1501 aaKnown RBP5.93□□□□□ -1.46
tC(GCA)GtC(GCA)G MYO4P32492 1471 aa5.92□□□□□ -1.46
tC(GCA)GtC(GCA)G DRS1P32892 752 aaKnown RBP5.92□□□□□ -1.46
tC(GCA)GtC(GCA)G YSP2Q06681 1438 aa5.91□□□□□ -1.46
tC(GCA)GtC(GCA)G POL1P13382 1468 aa5.9□□□□□ -1.46
tC(GCA)GtC(GCA)G BUD3P25558 1636 aa5.9□□□□□ -1.46
tC(GCA)GtC(GCA)G CHC1P22137 1653 aaKnown RBP5.9□□□□□ -1.47
tC(GCA)GtC(GCA)G YTA7P40340 1379 aa5.9□□□□□ -1.47
tC(GCA)GtC(GCA)G STU1P38198 1513 aa5.89□□□□□ -1.47
tC(GCA)GtC(GCA)G PDR12Q02785 1511 aa5.89□□□□□ -1.47
tC(GCA)GtC(GCA)G NUP157P40064 1391 aaKnown RBP5.88□□□□□ -1.47
tC(GCA)GtC(GCA)G YAP3P38749 330 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G RRD1P40454 393 aaKnown RBP5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G THI12P42883 340 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G THI5P43534 340 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G THI11P47183 340 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G THI13Q07748 340 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G MLP2P40457 1679 aa5.87□□□□□ -1.47
tC(GCA)GtC(GCA)G BNR1P40450 1375 aa5.86□□□□□ -1.47
tC(GCA)GtC(GCA)G PRI1P10363 409 aa5.85□□□□□ -1.47
tC(GCA)GtC(GCA)G RTT106P40161 455 aa5.84□□□□□ -1.47
tC(GCA)GtC(GCA)G TY3B-GQ99315 1547 aa5.84□□□□□ -1.48
tC(GCA)GtC(GCA)G YIL055CP40523 627 aaKnown RBP5.83□□□□□ -1.48
tC(GCA)GtC(GCA)G APP1P53933 587 aa5.82□□□□□ -1.48
tC(GCA)GtC(GCA)G YAH1Q12184 172 aaKnown RBP5.8□□□□□ -1.48
tC(GCA)GtC(GCA)G YMR196WQ04336 1088 aa5.74□□□□□ -1.49
tC(GCA)GtC(GCA)G STH1P32597 1359 aa5.73□□□□□ -1.49
tC(GCA)GtC(GCA)G SEC7P11075 2009 aaKnown RBP5.72□□□□□ -1.49
tC(GCA)GtC(GCA)G YMR074CQ04773 145 aa5.72□□□□□ -1.49
tC(GCA)GtC(GCA)G HAP1P0CE41 1502 aa5.69□□□□□ -1.5
tC(GCA)GtC(GCA)G YBT1P32386 1661 aa5.68□□□□□ -1.5
tC(GCA)GtC(GCA)G TY1B-NL2Q99337 1749 aaKnown RBP5.68□□□□□ -1.5
tC(GCA)GtC(GCA)G SSA1P10591 642 aaKnown RBP5.67□□□□□ -1.5
tC(GCA)GtC(GCA)G BUD31P25337 157 aaPredicted RBP5.66□□□□□ -1.5
tC(GCA)GtC(GCA)G NUP188P52593 1655 aaKnown RBP5.66□□□□□ -1.5
tC(GCA)GtC(GCA)G IML1P47170 1584 aa5.65□□□□□ -1.5
tC(GCA)GtC(GCA)G REB1P21538 810 aa5.59□□□□□ -1.51
tC(GCA)GtC(GCA)G PTP3P40048 928 aa5.59□□□□□ -1.51
tC(GCA)GtC(GCA)G URN1Q06525 465 aaKnown RBP5.59□□□□□ -1.51
tC(GCA)GtC(GCA)G VMR1P38735 1592 aa5.57□□□□□ -1.52
tC(GCA)GtC(GCA)G BCK1Q01389 1478 aa5.56□□□□□ -1.52
tC(GCA)GtC(GCA)G PDR11P40550 1411 aa5.56□□□□□ -1.52
tC(GCA)GtC(GCA)G TYS1P36421 394 aaKnown RBP5.54□□□□□ -1.52
tC(GCA)GtC(GCA)G IPL1P38991 367 aa5.54□□□□□ -1.52
tC(GCA)GtC(GCA)G CKB1P43639 278 aa5.54□□□□□ -1.52
tC(GCA)GtC(GCA)G ENT1Q12518 454 aa5.54□□□□□ -1.52
tC(GCA)GtC(GCA)G ENV9Q08651 330 aa5.53□□□□□ -1.52
tC(GCA)GtC(GCA)G YBL086CP38177 466 aa5.52□□□□□ -1.53
tC(GCA)GtC(GCA)G IMH1Q06704 911 aaKnown RBP5.5□□□□□ -1.53
tC(GCA)GtC(GCA)G IFH1P39520 1085 aa5.47□□□□□ -1.53
tC(GCA)GtC(GCA)G YRF1-2P40105 1681 aa5.43□□□□□ -1.54
tC(GCA)GtC(GCA)G UBP1P25037 809 aa5.43□□□□□ -1.54
tC(GCA)GtC(GCA)G GEA1P47102 1408 aaPredicted RBP5.42□□□□□ -1.54
tC(GCA)GtC(GCA)G UGA2P38067 497 aa5.42□□□□□ -1.54
tC(GCA)GtC(GCA)G CAT8P39113 1433 aa5.41□□□□□ -1.54
tC(GCA)GtC(GCA)G RPN11P43588 306 aaKnown RBP5.41□□□□□ -1.54
tC(GCA)GtC(GCA)G PDR5P33302 1511 aaKnown RBP5.41□□□□□ -1.54
tC(GCA)GtC(GCA)G LYS4P49367 693 aaPredicted RBP5.4□□□□□ -1.54
tC(GCA)GtC(GCA)G KRE5P22023 1365 aa5.4□□□□□ -1.55
tC(GCA)GtC(GCA)G RPG1P38249 964 aaKnown RBP5.39□□□□□ -1.55
tC(GCA)GtC(GCA)G SAS10Q12136 610 aaPredicted RBP5.39□□□□□ -1.55
tC(GCA)GtC(GCA)G TOM1Q03280 3268 aa5.38□□□□□ -1.55
tC(GCA)GtC(GCA)G SSA2P10592 639 aaKnown RBP5.38□□□□□ -1.55
tC(GCA)GtC(GCA)G RIA1P53893 1110 aa5.38□□□□□ -1.55
tC(GCA)GtC(GCA)G GCN2P15442 1659 aa5.37□□□□□ -1.55
tC(GCA)GtC(GCA)G LEU3P08638 886 aa5.36□□□□□ -1.55
tC(GCA)GtC(GCA)G YNR029CP53729 429 aaKnown RBP5.36□□□□□ -1.55
tC(GCA)GtC(GCA)G NPR2P39923 615 aa5.34□□□□□ -1.55
tC(GCA)GtC(GCA)G GTT3P39996 337 aa5.34□□□□□ -1.55
tC(GCA)GtC(GCA)G RRP5Q05022 1729 aaKnown RBP5.34□□□□□ -1.56
tC(GCA)GtC(GCA)G SSA4P22202 642 aaKnown RBP5.33□□□□□ -1.56
tC(GCA)GtC(GCA)G ALD2P47771 506 aa5.33□□□□□ -1.56
tC(GCA)GtC(GCA)G CFT1Q06632 1357 aaKnown RBP5.32□□□□□ -1.56
tC(GCA)GtC(GCA)G CTH1P47976 325 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms