RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 TY2B-FP0CX63 1770 aa4.57□□□□□ -1.68
snR43snR43 TY2B-GR2P0CX64 1770 aa4.57□□□□□ -1.68
snR43snR43 TY2B-CP25384 1770 aa4.57□□□□□ -1.68
snR43snR43 TY2B-DR2Q03494 1770 aa4.57□□□□□ -1.68
snR43snR43 TY1B-DR1Q03855 1755 aa4.57□□□□□ -1.68
snR43snR43 TY2B-DR3Q07791 1770 aaKnown RBP4.57□□□□□ -1.68
snR43snR43 TY2B-OR1Q12113 1770 aa4.57□□□□□ -1.68
snR43snR43 TY1B-BRQ12193 1756 aa4.57□□□□□ -1.68
snR43snR43 TY1B-GR3Q12316 1755 aa4.57□□□□□ -1.68
snR43snR43 TY2B-DR1Q12472 1770 aa4.57□□□□□ -1.68
snR43snR43 TY2B-OR2Q12501 1770 aa4.57□□□□□ -1.68
snR43snR43 TY1B-ORQ92393 1755 aa4.57□□□□□ -1.68
snR43snR43 ESC1Q03661 1658 aaKnown RBP4.57□□□□□ -1.68
snR43snR43 MGA2P40578 1113 aa4.56□□□□□ -1.68
snR43snR43 MST1P07236 462 aa4.55□□□□□ -1.68
snR43snR43 MRM1P25270 412 aa4.55□□□□□ -1.68
snR43snR43 RQC2Q12532 1038 aaKnown RBP4.55□□□□□ -1.68
snR43snR43 MMS22Q06164 1454 aa4.55□□□□□ -1.68
snR43snR43 ABP1P15891 592 aaKnown RBP4.54□□□□□ -1.68
snR43snR43 MMS1Q06211 1407 aa4.54□□□□□ -1.68
snR43snR43 TRM732Q03496 1420 aa4.53□□□□□ -1.68
snR43snR43 TY1B-HO13535 1793 aa4.51□□□□□ -1.69
snR43snR43 TY1B-DR5P0C2I2 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-DR6P0C2I3 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-LR2P0C2I5 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-LR3P0C2I6 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 TY1B-PR1P0C2I9 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 TY1B-PR2P0C2J0 1756 aa4.51□□□□□ -1.69
snR43snR43 TY1B-PR3P0C2J1 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 TY1B-JR1P47098 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-ML2Q03434 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 TY1B-ER1Q03612 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-ML1Q04711 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 TY1B-GR2Q12269 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-OLQ12273 1755 aa4.51□□□□□ -1.69
snR43snR43 TY1B-PLQ12414 1755 aaKnown RBP4.51□□□□□ -1.69
snR43snR43 DRS2P39524 1355 aa4.51□□□□□ -1.69
snR43snR43 NSR1P27476 414 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
snR43snR43 RCR1P38212 213 aa4.5□□□□□ -1.69
snR43snR43 TY2B-BQ12491 1770 aa4.5□□□□□ -1.69
snR43snR43 VPS15P22219 1454 aa4.49□□□□□ -1.69
snR43snR43 NUP159P40477 1460 aa4.49□□□□□ -1.69
snR43snR43 IRC20Q06554 1556 aa4.49□□□□□ -1.69
snR43snR43 YOR238WQ08634 303 aa4.49□□□□□ -1.69
snR43snR43 POL1P13382 1468 aa4.49□□□□□ -1.69
snR43snR43 SMC4Q12267 1418 aa4.48□□□□□ -1.69
snR43snR43 TY1B-DR3Q99231 1755 aa4.48□□□□□ -1.69
snR43snR43 SPP41P38904 1435 aa4.47□□□□□ -1.69
snR43snR43 YRF1-1P0CX20 1796 aa4.47□□□□□ -1.69
snR43snR43 YRF1-5P0CX21 1796 aa4.47□□□□□ -1.69
snR43snR43 YRF1-8P0CX22 1796 aa4.47□□□□□ -1.69
snR43snR43 YOR1P53049 1477 aa4.46□□□□□ -1.7
snR43snR43 DMA1P38823 416 aa4.46□□□□□ -1.7
snR43snR43 YBL029C-AQ3E756 94 aa4.46□□□□□ -1.7
snR43snR43 TSC11P40061 1430 aa4.46□□□□□ -1.7
snR43snR43 PIB1Q06651 286 aa4.45□□□□□ -1.7
snR43snR43 YAP5P40574 245 aa4.44□□□□□ -1.7
snR43snR43 SNT2P53127 1403 aa4.44□□□□□ -1.7
snR43snR43 DNF2Q12675 1612 aa4.43□□□□□ -1.7
snR43snR43 VTH1P40438 1549 aa4.42□□□□□ -1.7
snR43snR43 VTH2P40890 1549 aa4.42□□□□□ -1.7
snR43snR43 VNX1P42839 908 aa4.42□□□□□ -1.7
snR43snR43 TY1B-JR2P47100 1755 aaKnown RBP4.42□□□□□ -1.7
snR43snR43 TY1B-ER2Q03619 1755 aa4.42□□□□□ -1.7
snR43snR43 TY1B-MR1Q04214 1755 aa4.42□□□□□ -1.7
snR43snR43 TY1B-MR2Q04670 1755 aaKnown RBP4.42□□□□□ -1.7
snR43snR43 TY1B-LR1Q12088 1755 aaKnown RBP4.42□□□□□ -1.7
snR43snR43 TY1B-NL1Q12112 1755 aa4.42□□□□□ -1.7
snR43snR43 TY1B-GR1Q12141 1755 aa4.42□□□□□ -1.7
snR43snR43 TY1B-BLQ12490 1755 aa4.42□□□□□ -1.7
snR43snR43 NTE1Q04958 1679 aa4.41□□□□□ -1.7
snR43snR43 RTG3P38165 486 aa4.41□□□□□ -1.7
snR43snR43 MYO4P32492 1471 aa4.41□□□□□ -1.7
snR43snR43 STU1P38198 1513 aa4.41□□□□□ -1.7
snR43snR43 RAM2P29703 316 aa4.4□□□□□ -1.71
snR43snR43 VPS29P38759 282 aa4.4□□□□□ -1.71
snR43snR43 RPO21P04050 1733 aaKnown RBP4.39□□□□□ -1.71
snR43snR43 NUP170P38181 1502 aa4.38□□□□□ -1.71
snR43snR43 MET10P39692 1035 aa4.37□□□□□ -1.71
snR43snR43 SPP1Q03012 353 aa4.37□□□□□ -1.71
snR43snR43 SNQ2P32568 1501 aaKnown RBP4.36□□□□□ -1.71
snR43snR43 STS1P38637 319 aa4.36□□□□□ -1.71
snR43snR43 YOR093CQ12275 1648 aa4.35□□□□□ -1.71
snR43snR43 DBP1P24784 617 aaKnown RBP4.35□□□□□ -1.71
snR43snR43 WSC3Q12215 556 aa4.35□□□□□ -1.71
snR43snR43 PDR12Q02785 1511 aa4.35□□□□□ -1.71
snR43snR43 YMR1P47147 688 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
snR43snR43 TRM3Q07527 1436 aa4.34□□□□□ -1.71
snR43snR43 SPO14P36126 1683 aa4.34□□□□□ -1.71
snR43snR43 TIF11P38912 153 aaKnown RBP4.33□□□□□ -1.72
snR43snR43 STH1P32597 1359 aa4.32□□□□□ -1.72
snR43snR43 GTT3P39996 337 aa4.32□□□□□ -1.72
snR43snR43 ULS1Q08562 1619 aa4.32□□□□□ -1.72
snR43snR43 IQG1Q12280 1495 aa4.31□□□□□ -1.72
snR43snR43 YTA7P40340 1379 aa4.31□□□□□ -1.72
snR43snR43 AIR2Q12476 344 aaKnown RBP4.3□□□□□ -1.72
snR43snR43 GDB1Q06625 1536 aa4.3□□□□□ -1.72
snR43snR43 FKH1P40466 484 aa4.29□□□□□ -1.72
snR43snR43 DOP1Q03921 1698 aa4.29□□□□□ -1.72
snR43snR43 PDR10P51533 1564 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms