RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YFR016CP43597 1233 aaKnown RBP12.13□□□□□ -0.47
SPT20YOL148C NOP7P53261 605 aaKnown RBP12.13□□□□□ -0.47
SPT20YOL148C EAF7P53911 425 aaKnown RBP12.13□□□□□ -0.47
SPT20YOL148C MNN4P36044 1178 aa12.11□□□□□ -0.47
SPT20YOL148C ESC1Q03661 1658 aaKnown RBP12.11□□□□□ -0.47
SPT20YOL148C TY2B-BQ12491 1770 aa12.09□□□□□ -0.47
SPT20YOL148C OPY1P38271 328 aa12.09□□□□□ -0.47
SPT20YOL148C TCB2P48231 1178 aa12.08□□□□□ -0.48
SPT20YOL148C GCN2P15442 1659 aa12.06□□□□□ -0.48
SPT20YOL148C YBT1P32386 1661 aa12.06□□□□□ -0.48
SPT20YOL148C IRC20Q06554 1556 aa12.06□□□□□ -0.48
SPT20YOL148C MDS3P53094 1487 aa12.05□□□□□ -0.48
SPT20YOL148C ORC1P54784 914 aaPredicted RBP12.03□□□□□ -0.48
SPT20YOL148C CAT8P39113 1433 aa12.03□□□□□ -0.48
SPT20YOL148C SNT2P53127 1403 aa12.02□□□□□ -0.49
SPT20YOL148C VTH1P40438 1549 aa12.01□□□□□ -0.49
SPT20YOL148C VTH2P40890 1549 aa12.01□□□□□ -0.49
SPT20YOL148C FPR3P38911 411 aaKnown RBP12□□□□□ -0.49
SPT20YOL148C PDR5P33302 1511 aaKnown RBP11.99□□□□□ -0.49
SPT20YOL148C FUN12P39730 1002 aaKnown RBP11.99□□□□□ -0.49
SPT20YOL148C PDS5Q04264 1277 aa11.97□□□□□ -0.49
SPT20YOL148C TY1B-HO13535 1793 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-DR5P0C2I2 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-DR6P0C2I3 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-LR2P0C2I5 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-LR3P0C2I6 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C TY1B-PR1P0C2I9 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C TY1B-PR2P0C2J0 1756 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-PR3P0C2J1 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C TY1B-JR1P47098 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-ML2Q03434 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C TY1B-ER1Q03612 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-ML1Q04711 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C TY1B-GR2Q12269 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-OLQ12273 1755 aa11.95□□□□□ -0.5
SPT20YOL148C TY1B-PLQ12414 1755 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C AVT3P36062 692 aa11.95□□□□□ -0.5
SPT20YOL148C SNF7P39929 240 aaKnown RBP11.95□□□□□ -0.5
SPT20YOL148C CDC45Q08032 650 aa11.93□□□□□ -0.5
SPT20YOL148C PAF1P38351 445 aa11.92□□□□□ -0.5
SPT20YOL148C RPP0P05317 312 aaKnown RBP11.91□□□□□ -0.5
SPT20YOL148C GEA2P39993 1459 aaKnown RBP11.91□□□□□ -0.5
SPT20YOL148C VPS27P40343 622 aaKnown RBP11.9□□□□□ -0.5
SPT20YOL148C SIS2P36024 562 aa11.88□□□□□ -0.51
SPT20YOL148C YIR014WP40570 242 aa11.88□□□□□ -0.51
SPT20YOL148C BUD21Q08492 214 aaPredicted RBP11.87□□□□□ -0.51
SPT20YOL148C TY3B-IQ7LHG5 1498 aaKnown RBP11.87□□□□□ -0.51
SPT20YOL148C ABP1P15891 592 aaKnown RBP11.86□□□□□ -0.51
SPT20YOL148C ARO1P08566 1588 aaKnown RBP11.86□□□□□ -0.51
SPT20YOL148C GDB1Q06625 1536 aa11.86□□□□□ -0.51
SPT20YOL148C TY1B-BRQ12193 1756 aa11.85□□□□□ -0.51
SPT20YOL148C TY1B-GR3Q12316 1755 aa11.85□□□□□ -0.51
SPT20YOL148C TY1B-ORQ92393 1755 aa11.85□□□□□ -0.51
SPT20YOL148C CKB1P43639 278 aa11.85□□□□□ -0.51
SPT20YOL148C RVB2Q12464 471 aaKnown RBP11.85□□□□□ -0.51
SPT20YOL148C LEO1P38439 464 aa11.83□□□□□ -0.51
SPT20YOL148C NST1P53935 1240 aa11.83□□□□□ -0.51
SPT20YOL148C MMS1Q06211 1407 aa11.83□□□□□ -0.52
SPT20YOL148C ROX1P25042 368 aa11.83□□□□□ -0.52
SPT20YOL148C TY1B-JR2P47100 1755 aaKnown RBP11.8□□□□□ -0.52
SPT20YOL148C TY1B-ER2Q03619 1755 aa11.8□□□□□ -0.52
SPT20YOL148C TY1B-MR1Q04214 1755 aa11.8□□□□□ -0.52
SPT20YOL148C TY1B-MR2Q04670 1755 aaKnown RBP11.8□□□□□ -0.52
SPT20YOL148C TY1B-LR1Q12088 1755 aaKnown RBP11.8□□□□□ -0.52
SPT20YOL148C TY1B-NL1Q12112 1755 aa11.8□□□□□ -0.52
SPT20YOL148C TY1B-GR1Q12141 1755 aa11.8□□□□□ -0.52
SPT20YOL148C TY1B-BLQ12490 1755 aa11.8□□□□□ -0.52
SPT20YOL148C IQG1Q12280 1495 aa11.78□□□□□ -0.52
SPT20YOL148C YRB30P53107 440 aaPredicted RBP11.78□□□□□ -0.52
SPT20YOL148C QCR6P00127 147 aa11.76□□□□□ -0.53
SPT20YOL148C SCT1P32784 759 aa11.74□□□□□ -0.53
SPT20YOL148C PDR12Q02785 1511 aa11.73□□□□□ -0.53
SPT20YOL148C CDC25P04821 1589 aa11.72□□□□□ -0.53
SPT20YOL148C SLN1P39928 1220 aaPredicted RBP11.71□□□□□ -0.54
SPT20YOL148C PCT1P13259 424 aa11.7□□□□□ -0.54
SPT20YOL148C YDL144CQ07589 356 aa11.7□□□□□ -0.54
SPT20YOL148C TAF5P38129 798 aa11.7□□□□□ -0.54
SPT20YOL148C KIP3P53086 805 aaKnown RBP11.69□□□□□ -0.54
SPT20YOL148C DJP1P40564 432 aa11.68□□□□□ -0.54
SPT20YOL148C VPS24P36095 224 aaKnown RBP11.67□□□□□ -0.54
SPT20YOL148C DIP2Q12220 943 aaPredicted RBP11.67□□□□□ -0.54
SPT20YOL148C LTE1P07866 1435 aa11.67□□□□□ -0.54
SPT20YOL148C NUP157P40064 1391 aaKnown RBP11.67□□□□□ -0.54
SPT20YOL148C IOC4Q04213 475 aa11.67□□□□□ -0.54
SPT20YOL148C AIM44Q99299 758 aa11.67□□□□□ -0.54
SPT20YOL148C RTC1Q08281 1341 aa11.65□□□□□ -0.54
SPT20YOL148C YOR093CQ12275 1648 aa11.64□□□□□ -0.55
SPT20YOL148C NTE1Q04958 1679 aa11.64□□□□□ -0.55
SPT20YOL148C SUI2P20459 304 aaKnown RBP11.63□□□□□ -0.55
SPT20YOL148C ESL2P36168 1195 aa11.63□□□□□ -0.55
SPT20YOL148C RPO21P04050 1733 aaKnown RBP11.63□□□□□ -0.55
SPT20YOL148C RAV1P47104 1357 aa11.63□□□□□ -0.55
SPT20YOL148C EDE1P34216 1381 aa11.62□□□□□ -0.55
SPT20YOL148C NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
SPT20YOL148C NOT3P06102 836 aaKnown RBP11.61□□□□□ -0.55
SPT20YOL148C MSP1P28737 362 aa11.61□□□□□ -0.55
SPT20YOL148C BUD3P25558 1636 aa11.6□□□□□ -0.55
SPT20YOL148C DNF2Q12675 1612 aa11.6□□□□□ -0.55
SPT20YOL148C YSP2Q06681 1438 aa11.59□□□□□ -0.55
SPT20YOL148C RAD2P07276 1031 aa11.58□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms