RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W YCF1P39109 1515 aaKnown RBP7.88□□□□□ -1.15
AVT4YNL101W IFH1P39520 1085 aa7.87□□□□□ -1.15
AVT4YNL101W YPP1P46951 817 aa7.87□□□□□ -1.15
AVT4YNL101W RAD26P40352 1085 aa7.87□□□□□ -1.15
AVT4YNL101W TSC11P40061 1430 aa7.86□□□□□ -1.15
AVT4YNL101W DEF1P35732 738 aaKnown RBP7.86□□□□□ -1.15
AVT4YNL101W MYO4P32492 1471 aa7.86□□□□□ -1.15
AVT4YNL101W YPK9Q12697 1472 aa7.86□□□□□ -1.15
AVT4YNL101W YIR014WP40570 242 aa7.85□□□□□ -1.15
AVT4YNL101W ORC1P54784 914 aaPredicted RBP7.85□□□□□ -1.15
AVT4YNL101W ESP1Q03018 1630 aa7.85□□□□□ -1.15
AVT4YNL101W NOP58Q12499 511 aaKnown RBP7.85□□□□□ -1.15
AVT4YNL101W DNA2P38859 1522 aa7.83□□□□□ -1.16
AVT4YNL101W PCT1P13259 424 aa7.82□□□□□ -1.16
AVT4YNL101W SWE1P32944 819 aa7.82□□□□□ -1.16
AVT4YNL101W MHP1P43638 1398 aa7.82□□□□□ -1.16
AVT4YNL101W NST1P53935 1240 aa7.82□□□□□ -1.16
AVT4YNL101W SNQ2P32568 1501 aaKnown RBP7.82□□□□□ -1.16
AVT4YNL101W KOG1P38873 1557 aa7.82□□□□□ -1.16
AVT4YNL101W IRC20Q06554 1556 aa7.81□□□□□ -1.16
AVT4YNL101W GEA1P47102 1408 aaPredicted RBP7.8□□□□□ -1.16
AVT4YNL101W KNS1P32350 737 aaPredicted RBP7.79□□□□□ -1.16
AVT4YNL101W SWR1Q05471 1514 aa7.79□□□□□ -1.16
AVT4YNL101W ABP1P15891 592 aaKnown RBP7.79□□□□□ -1.16
AVT4YNL101W SPC110P32380 944 aa7.79□□□□□ -1.16
AVT4YNL101W KIP3P53086 805 aaKnown RBP7.79□□□□□ -1.16
AVT4YNL101W NOT3P06102 836 aaKnown RBP7.78□□□□□ -1.16
AVT4YNL101W YRB30P53107 440 aaPredicted RBP7.78□□□□□ -1.16
AVT4YNL101W MSP1P28737 362 aa7.77□□□□□ -1.17
AVT4YNL101W RVB2Q12464 471 aaKnown RBP7.77□□□□□ -1.17
AVT4YNL101W EDE1P34216 1381 aa7.76□□□□□ -1.17
AVT4YNL101W YOR1P53049 1477 aa7.76□□□□□ -1.17
AVT4YNL101W NUP159P40477 1460 aa7.75□□□□□ -1.17
AVT4YNL101W ARL1P38116 183 aaKnown RBP7.75□□□□□ -1.17
AVT4YNL101W RIX1P38883 763 aaPredicted RBP7.75□□□□□ -1.17
AVT4YNL101W SMC3P47037 1230 aa7.75□□□□□ -1.17
AVT4YNL101W GCN2P15442 1659 aa7.75□□□□□ -1.17
AVT4YNL101W RKR1Q04781 1562 aa7.74□□□□□ -1.17
AVT4YNL101W PDR15Q04182 1529 aaKnown RBP7.74□□□□□ -1.17
AVT4YNL101W SPT2P06843 333 aaPredicted RBP7.74□□□□□ -1.17
AVT4YNL101W CLB5P30283 435 aa7.74□□□□□ -1.17
AVT4YNL101W PSH1Q12161 406 aa7.74□□□□□ -1.17
AVT4YNL101W VPS24P36095 224 aaKnown RBP7.73□□□□□ -1.17
AVT4YNL101W NMD2P38798 1089 aaKnown RBP7.72□□□□□ -1.17
AVT4YNL101W CDC45Q08032 650 aa7.7□□□□□ -1.18
AVT4YNL101W DNF1P32660 1571 aa7.69□□□□□ -1.18
AVT4YNL101W PDS5Q04264 1277 aa7.69□□□□□ -1.18
AVT4YNL101W VPS15P22219 1454 aa7.69□□□□□ -1.18
AVT4YNL101W TY3B-GQ99315 1547 aa7.69□□□□□ -1.18
AVT4YNL101W SIC1P38634 284 aa7.68□□□□□ -1.18
AVT4YNL101W VPS27P40343 622 aaKnown RBP7.68□□□□□ -1.18
AVT4YNL101W MSH3P25336 1018 aa7.67□□□□□ -1.18
AVT4YNL101W TRM3Q07527 1436 aa7.67□□□□□ -1.18
AVT4YNL101W TEA1P47988 759 aa7.67□□□□□ -1.18
AVT4YNL101W DSN1P40568 576 aa7.66□□□□□ -1.18
AVT4YNL101W DOS2P54858 310 aa7.66□□□□□ -1.18
AVT4YNL101W RAD2P07276 1031 aa7.65□□□□□ -1.18
AVT4YNL101W MED8P38304 223 aa7.65□□□□□ -1.18
AVT4YNL101W ESC1Q03661 1658 aaKnown RBP7.65□□□□□ -1.18
AVT4YNL101W BMS1Q08965 1183 aaKnown RBP7.65□□□□□ -1.18
AVT4YNL101W ECM1P39715 212 aa7.64□□□□□ -1.19
AVT4YNL101W YNL011CP53980 444 aa7.64□□□□□ -1.19
AVT4YNL101W PDR5P33302 1511 aaKnown RBP7.64□□□□□ -1.19
AVT4YNL101W TPM2P40414 161 aa7.64□□□□□ -1.19
AVT4YNL101W ULS1Q08562 1619 aa7.64□□□□□ -1.19
AVT4YNL101W NUP157P40064 1391 aaKnown RBP7.63□□□□□ -1.19
AVT4YNL101W GEA2P39993 1459 aaKnown RBP7.63□□□□□ -1.19
AVT4YNL101W VPS4P52917 437 aa7.63□□□□□ -1.19
AVT4YNL101W NOP7P53261 605 aaKnown RBP7.63□□□□□ -1.19
AVT4YNL101W RPN1P38764 993 aaKnown RBP7.62□□□□□ -1.19
AVT4YNL101W MSH4P40965 878 aaPredicted RBP7.61□□□□□ -1.19
AVT4YNL101W ETT1Q08421 412 aaKnown RBP7.61□□□□□ -1.19
AVT4YNL101W RPP0P05317 312 aaKnown RBP7.61□□□□□ -1.19
AVT4YNL101W RSC1P53236 928 aa7.61□□□□□ -1.19
AVT4YNL101W PRP3Q03338 469 aaPredicted RBP7.61□□□□□ -1.19
AVT4YNL101W SPB4P25808 606 aaPredicted RBP7.6□□□□□ -1.19
AVT4YNL101W LSP1Q12230 341 aaKnown RBP7.6□□□□□ -1.19
AVT4YNL101W SUI2P20459 304 aaKnown RBP7.59□□□□□ -1.19
AVT4YNL101W CLB1P24868 471 aa7.59□□□□□ -1.19
AVT4YNL101W MCM2P29469 868 aa7.59□□□□□ -1.19
AVT4YNL101W LCD1Q04377 747 aa7.59□□□□□ -1.19
AVT4YNL101W MDG1P53885 366 aa7.58□□□□□ -1.2
AVT4YNL101W UTP13Q05946 817 aaKnown RBP7.58□□□□□ -1.2
AVT4YNL101W YDL144CQ07589 356 aa7.58□□□□□ -1.2
AVT4YNL101W DEP1P31385 405 aa7.58□□□□□ -1.2
AVT4YNL101W CIN4P39110 191 aa7.58□□□□□ -1.2
AVT4YNL101W GRX3Q03835 250 aa7.58□□□□□ -1.2
AVT4YNL101W NOP14Q99207 810 aaKnown RBP7.58□□□□□ -1.2
AVT4YNL101W PIL1P53252 339 aaKnown RBP7.57□□□□□ -1.2
AVT4YNL101W ECM16Q04217 1267 aaKnown RBP7.57□□□□□ -1.2
AVT4YNL101W HSP82P02829 709 aaKnown RBP7.57□□□□□ -1.2
AVT4YNL101W LTV1P34078 463 aa7.57□□□□□ -1.2
AVT4YNL101W BYE1P36106 594 aa7.57□□□□□ -1.2
AVT4YNL101W HOS3Q02959 697 aaKnown RBP7.57□□□□□ -1.2
AVT4YNL101W VPS60Q03390 229 aa7.56□□□□□ -1.2
AVT4YNL101W ESC2Q06340 456 aa7.55□□□□□ -1.2
AVT4YNL101W GDB1Q06625 1536 aa7.55□□□□□ -1.2
AVT4YNL101W RPN7Q06103 429 aaKnown RBP7.55□□□□□ -1.2
AVT4YNL101W RIM101P33400 625 aa7.54□□□□□ -1.2
AVT4YNL101W ITC1P53125 1264 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms