RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B SAS4Q04003 481 aa1.96□□□□□ -2.1
YNL054W-BYNL054W-B YMR1P47147 688 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
YNL054W-BYNL054W-B SAM3Q08986 587 aa1.95□□□□□ -2.1
YNL054W-BYNL054W-B PTC4P38089 393 aa1.95□□□□□ -2.1
YNL054W-BYNL054W-B AI2P03876 854 aa1.94□□□□□ -2.1
YNL054W-BYNL054W-B YPL062WQ02781 134 aa1.94□□□□□ -2.1
YNL054W-BYNL054W-B MTC5Q03897 1148 aa1.93□□□□□ -2.1
YNL054W-BYNL054W-B GRE2Q12068 342 aaKnown RBP1.93□□□□□ -2.1
YNL054W-BYNL054W-B PAT1P25644 796 aaKnown RBP1.93□□□□□ -2.1
YNL054W-BYNL054W-B ARH1P48360 493 aa1.93□□□□□ -2.1
YNL054W-BYNL054W-B BRE2P43132 505 aa1.92□□□□□ -2.1
YNL054W-BYNL054W-B GYP1Q08484 637 aa1.92□□□□□ -2.1
YNL054W-BYNL054W-B GAR1P28007 205 aaKnown RBP1.92□□□□□ -2.1
YNL054W-BYNL054W-B ATH1P48016 1211 aa1.92□□□□□ -2.1
YNL054W-BYNL054W-B BNI4P53858 892 aa1.91□□□□□ -2.1
YNL054W-BYNL054W-B YLR346CQ06139 101 aa1.91□□□□□ -2.1
YNL054W-BYNL054W-B YFR006WP43590 535 aa1.91□□□□□ -2.1
YNL054W-BYNL054W-B HAP5Q02516 242 aa1.9□□□□□ -2.1
YNL054W-BYNL054W-B YPR204WQ08995 1032 aa1.89□□□□□ -2.11
YNL054W-BYNL054W-B ERG12P07277 443 aa1.89□□□□□ -2.11
YNL054W-BYNL054W-B RTG3P38165 486 aa1.89□□□□□ -2.11
YNL054W-BYNL054W-B DCW1P36091 449 aa1.89□□□□□ -2.11
YNL054W-BYNL054W-B VMA1P17255 1071 aaKnown RBP1.89□□□□□ -2.11
YNL054W-BYNL054W-B AMS1P22855 1083 aa1.89□□□□□ -2.11
YNL054W-BYNL054W-B PUS1Q12211 544 aaKnown RBP1.88□□□□□ -2.11
YNL054W-BYNL054W-B YML082WQ04533 649 aaKnown RBP1.88□□□□□ -2.11
YNL054W-BYNL054W-B RTT106P40161 455 aa1.88□□□□□ -2.11
YNL054W-BYNL054W-B YEL023CP39992 682 aa1.87□□□□□ -2.11
YNL054W-BYNL054W-B DBP1P24784 617 aaKnown RBP1.86□□□□□ -2.11
YNL054W-BYNL054W-B NPL4P33755 580 aa1.86□□□□□ -2.11
YNL054W-BYNL054W-B GUT1P32190 709 aa1.85□□□□□ -2.11
YNL054W-BYNL054W-B NOP53Q12080 455 aaKnown RBP1.85□□□□□ -2.11
YNL054W-BYNL054W-B PHM7Q12252 991 aa1.85□□□□□ -2.11
YNL054W-BYNL054W-B PEX21P50091 288 aa1.84□□□□□ -2.11
YNL054W-BYNL054W-B MRM1P25270 412 aa1.84□□□□□ -2.11
YNL054W-BYNL054W-B HST3P53687 447 aa1.84□□□□□ -2.11
YNL054W-BYNL054W-B PML39Q03760 334 aa1.84□□□□□ -2.11
YNL054W-BYNL054W-B MIF2P35201 549 aa1.82□□□□□ -2.12
YNL054W-BYNL054W-B NAB2P32505 525 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
YNL054W-BYNL054W-B ISU2Q12056 156 aa1.82□□□□□ -2.12
YNL054W-BYNL054W-B CDC4P07834 779 aa1.82□□□□□ -2.12
YNL054W-BYNL054W-B SRF1Q12516 437 aa1.81□□□□□ -2.12
YNL054W-BYNL054W-B DAN4P47179 1161 aa1.81□□□□□ -2.12
YNL054W-BYNL054W-B YGR035CP53222 116 aa1.81□□□□□ -2.12
YNL054W-BYNL054W-B ENV9Q08651 330 aa1.8□□□□□ -2.12
YNL054W-BYNL054W-B AI4P03878 556 aa1.8□□□□□ -2.12
YNL054W-BYNL054W-B KIC1P38692 1080 aa1.79□□□□□ -2.12
YNL054W-BYNL054W-B RPP2BP02400 110 aaKnown RBP1.78□□□□□ -2.12
YNL054W-BYNL054W-B SPT16P32558 1035 aaKnown RBP1.78□□□□□ -2.12
YNL054W-BYNL054W-B DPL1Q05567 589 aa1.78□□□□□ -2.12
YNL054W-BYNL054W-B MPH3P0CE00 602 aa1.77□□□□□ -2.13
YNL054W-BYNL054W-B MGA2P40578 1113 aa1.77□□□□□ -2.13
YNL054W-BYNL054W-B YDR444WQ04093 687 aa1.76□□□□□ -2.13
YNL054W-BYNL054W-B SBP1P10080 294 aaKnown RBP1.76□□□□□ -2.13
YNL054W-BYNL054W-B SSP1P38871 571 aa1.76□□□□□ -2.13
YNL054W-BYNL054W-B OXP1P28273 1286 aa1.75□□□□□ -2.13
YNL054W-BYNL054W-B CST9Q06032 482 aa1.75□□□□□ -2.13
YNL054W-BYNL054W-B RCR1P38212 213 aa1.75□□□□□ -2.13
YNL054W-BYNL054W-B DPH6Q12429 685 aa1.74□□□□□ -2.13
YNL054W-BYNL054W-B NMA111P53920 997 aa1.74□□□□□ -2.13
YNL054W-BYNL054W-B IRC24P40580 263 aa1.73□□□□□ -2.13
YNL054W-BYNL054W-B PSD2P53037 1138 aaKnown RBP1.73□□□□□ -2.13
YNL054W-BYNL054W-B LYS5P50113 272 aa1.73□□□□□ -2.13
YNL054W-BYNL054W-B HED1Q03937 162 aa1.73□□□□□ -2.13
YNL054W-BYNL054W-B TFB4Q12004 338 aa1.73□□□□□ -2.13
YNL054W-BYNL054W-B PRT1P06103 763 aaKnown RBP1.73□□□□□ -2.13
YNL054W-BYNL054W-B ICP55P40051 511 aa1.73□□□□□ -2.13
YNL054W-BYNL054W-B LCB5Q06147 687 aaKnown RBP1.71□□□□□ -2.14
YNL054W-BYNL054W-B SRC1Q03707 834 aa1.71□□□□□ -2.14
YNL054W-BYNL054W-B RPP1AP05318 106 aaPredicted RBP1.7□□□□□ -2.14
YNL054W-BYNL054W-B CSC1Q06538 782 aa1.7□□□□□ -2.14
YNL054W-BYNL054W-B LSB3P43603 459 aaKnown RBP1.7□□□□□ -2.14
YNL054W-BYNL054W-B TRK2P28584 889 aa1.7□□□□□ -2.14
YNL054W-BYNL054W-B AI1P03875 834 aa1.7□□□□□ -2.14
YNL054W-BYNL054W-B MAK11P20484 414 aaKnown RBP1.7□□□□□ -2.14
YNL054W-BYNL054W-B SCW11P53189 542 aa1.7□□□□□ -2.14
YNL054W-BYNL054W-B URN1Q06525 465 aaKnown RBP1.7□□□□□ -2.14
YNL054W-BYNL054W-B MPC54Q08550 464 aa1.7□□□□□ -2.14
YNL054W-BYNL054W-B MET22P32179 357 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B GLY1P37303 387 aaKnown RBP1.69□□□□□ -2.14
YNL054W-BYNL054W-B SET1P38827 1080 aaKnown RBP1.69□□□□□ -2.14
YNL054W-BYNL054W-B NRD1P53617 575 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
YNL054W-BYNL054W-B RAD54P32863 898 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B VPS29P38759 282 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B KXD1P53158 218 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B TYW1Q08960 810 aaKnown RBP1.69□□□□□ -2.14
YNL054W-BYNL054W-B ARG82P07250 355 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B CLB5P30283 435 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B PTC3P34221 468 aaKnown RBP1.69□□□□□ -2.14
YNL054W-BYNL054W-B YLR271WQ06152 274 aa1.69□□□□□ -2.14
YNL054W-BYNL054W-B DMA1P38823 416 aa1.68□□□□□ -2.14
YNL054W-BYNL054W-B AFT1P22149 690 aa1.68□□□□□ -2.14
YNL054W-BYNL054W-B RAS1P01119 309 aa1.68□□□□□ -2.14
YNL054W-BYNL054W-B UBP2Q01476 1272 aa1.68□□□□□ -2.14
YNL054W-BYNL054W-B MIP1P15801 1254 aa1.67□□□□□ -2.14
YNL054W-BYNL054W-B UGA3P26370 528 aa1.67□□□□□ -2.14
YNL054W-BYNL054W-B MAC1P35192 417 aa1.67□□□□□ -2.14
YNL054W-BYNL054W-B GCD11P32481 527 aaKnown RBP1.67□□□□□ -2.14
YNL054W-BYNL054W-B LSC2P53312 427 aa1.67□□□□□ -2.14
YNL054W-BYNL054W-B STS1P38637 319 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms