RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C TY2B-FP0CX63 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-GR2P0CX64 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-CP25384 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-DR2Q03494 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY1B-DR1Q03855 1755 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-DR3Q07791 1770 aaKnown RBP6.02□□□□□ -1.44
CLF1YLR117C TY2B-OR1Q12113 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-DR1Q12472 1770 aa6.02□□□□□ -1.44
CLF1YLR117C TY2B-OR2Q12501 1770 aa6.02□□□□□ -1.44
CLF1YLR117C NUG1P40010 520 aaKnown RBP6.02□□□□□ -1.45
CLF1YLR117C SAS10Q12136 610 aaPredicted RBP6.02□□□□□ -1.45
CLF1YLR117C YOR1P53049 1477 aa6.02□□□□□ -1.45
CLF1YLR117C YCF1P39109 1515 aaKnown RBP6.02□□□□□ -1.45
CLF1YLR117C YLR419WQ06698 1435 aaKnown RBP6.01□□□□□ -1.45
CLF1YLR117C ENV11P53246 860 aa6.01□□□□□ -1.45
CLF1YLR117C RTT106P40161 455 aa6□□□□□ -1.45
CLF1YLR117C BPT1P14772 1559 aa6□□□□□ -1.45
CLF1YLR117C SPT21P35209 758 aa6□□□□□ -1.45
CLF1YLR117C KRI1P42846 591 aaKnown RBP6□□□□□ -1.45
CLF1YLR117C MLP2P40457 1679 aa5.99□□□□□ -1.45
CLF1YLR117C YTA7P40340 1379 aa5.99□□□□□ -1.45
CLF1YLR117C TY1B-DR3Q99231 1755 aa5.98□□□□□ -1.45
CLF1YLR117C LEU3P08638 886 aa5.98□□□□□ -1.45
CLF1YLR117C SMC4Q12267 1418 aa5.98□□□□□ -1.45
CLF1YLR117C DEF1P35732 738 aaKnown RBP5.97□□□□□ -1.45
CLF1YLR117C TY2B-BQ12491 1770 aa5.97□□□□□ -1.45
CLF1YLR117C PAF1P38351 445 aa5.97□□□□□ -1.45
CLF1YLR117C MYO4P32492 1471 aa5.96□□□□□ -1.46
CLF1YLR117C ROX1P25042 368 aa5.95□□□□□ -1.46
CLF1YLR117C MMS1Q06211 1407 aa5.95□□□□□ -1.46
CLF1YLR117C RNA1P11745 407 aaKnown RBP5.95□□□□□ -1.46
CLF1YLR117C FPR4Q06205 392 aaPredicted RBP5.95□□□□□ -1.46
CLF1YLR117C RIX1P38883 763 aaPredicted RBP5.94□□□□□ -1.46
CLF1YLR117C YRB30P53107 440 aaPredicted RBP5.94□□□□□ -1.46
CLF1YLR117C TY1B-BRQ12193 1756 aa5.94□□□□□ -1.46
CLF1YLR117C TY1B-GR3Q12316 1755 aa5.94□□□□□ -1.46
CLF1YLR117C TY1B-ORQ92393 1755 aa5.94□□□□□ -1.46
CLF1YLR117C TY1B-HO13535 1793 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-DR5P0C2I2 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-DR6P0C2I3 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-LR2P0C2I5 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-LR3P0C2I6 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C TY1B-PR1P0C2I9 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C TY1B-PR2P0C2J0 1756 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-PR3P0C2J1 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C TY1B-JR1P47098 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-ML2Q03434 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C TY1B-ER1Q03612 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-ML1Q04711 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C TY1B-GR2Q12269 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-OLQ12273 1755 aa5.93□□□□□ -1.46
CLF1YLR117C TY1B-PLQ12414 1755 aaKnown RBP5.93□□□□□ -1.46
CLF1YLR117C IRC20Q06554 1556 aa5.92□□□□□ -1.46
CLF1YLR117C PSD2P53037 1138 aaKnown RBP5.92□□□□□ -1.46
CLF1YLR117C PAN1P32521 1480 aa5.91□□□□□ -1.46
CLF1YLR117C NAP1P25293 417 aaKnown RBP5.9□□□□□ -1.46
CLF1YLR117C SLN1P39928 1220 aaPredicted RBP5.9□□□□□ -1.46
CLF1YLR117C YIR014WP40570 242 aa5.9□□□□□ -1.46
CLF1YLR117C CDC25P04821 1589 aa5.9□□□□□ -1.46
CLF1YLR117C CTR9P89105 1077 aa5.9□□□□□ -1.47
CLF1YLR117C NOP58Q12499 511 aaKnown RBP5.9□□□□□ -1.47
CLF1YLR117C FUN12P39730 1002 aaKnown RBP5.89□□□□□ -1.47
CLF1YLR117C SPC110P32380 944 aa5.89□□□□□ -1.47
CLF1YLR117C CDC27P38042 758 aa5.87□□□□□ -1.47
CLF1YLR117C SNQ2P32568 1501 aaKnown RBP5.87□□□□□ -1.47
CLF1YLR117C EDE1P34216 1381 aa5.86□□□□□ -1.47
CLF1YLR117C ESC1Q03661 1658 aaKnown RBP5.86□□□□□ -1.47
CLF1YLR117C SPT2P06843 333 aaPredicted RBP5.86□□□□□ -1.47
CLF1YLR117C ABP1P15891 592 aaKnown RBP5.86□□□□□ -1.47
CLF1YLR117C RAD26P40352 1085 aa5.85□□□□□ -1.47
CLF1YLR117C DJP1P40564 432 aa5.85□□□□□ -1.47
CLF1YLR117C SMC3P47037 1230 aa5.85□□□□□ -1.47
CLF1YLR117C NOT3P06102 836 aaKnown RBP5.84□□□□□ -1.47
CLF1YLR117C NMD2P38798 1089 aaKnown RBP5.84□□□□□ -1.47
CLF1YLR117C VTH1P40438 1549 aa5.84□□□□□ -1.47
CLF1YLR117C VTH2P40890 1549 aa5.84□□□□□ -1.47
CLF1YLR117C MHP1P43638 1398 aa5.84□□□□□ -1.47
CLF1YLR117C YKR023WP36119 530 aaKnown RBP5.84□□□□□ -1.47
CLF1YLR117C YPP1P46951 817 aa5.84□□□□□ -1.47
CLF1YLR117C TY1B-JR2P47100 1755 aaKnown RBP5.83□□□□□ -1.48
CLF1YLR117C TY1B-ER2Q03619 1755 aa5.83□□□□□ -1.48
CLF1YLR117C TY1B-MR1Q04214 1755 aa5.83□□□□□ -1.48
CLF1YLR117C TY1B-MR2Q04670 1755 aaKnown RBP5.83□□□□□ -1.48
CLF1YLR117C TY1B-LR1Q12088 1755 aaKnown RBP5.83□□□□□ -1.48
CLF1YLR117C TY1B-NL1Q12112 1755 aa5.83□□□□□ -1.48
CLF1YLR117C TY1B-GR1Q12141 1755 aa5.83□□□□□ -1.48
CLF1YLR117C TY1B-BLQ12490 1755 aa5.83□□□□□ -1.48
CLF1YLR117C PSH1Q12161 406 aa5.83□□□□□ -1.48
CLF1YLR117C TSC11P40061 1430 aa5.82□□□□□ -1.48
CLF1YLR117C PCT1P13259 424 aa5.82□□□□□ -1.48
CLF1YLR117C PDR15Q04182 1529 aaKnown RBP5.82□□□□□ -1.48
CLF1YLR117C ULS1Q08562 1619 aa5.81□□□□□ -1.48
CLF1YLR117C RPA190P10964 1664 aaKnown RBP5.81□□□□□ -1.48
CLF1YLR117C HSP82P02829 709 aaKnown RBP5.81□□□□□ -1.48
CLF1YLR117C DNF1P32660 1571 aa5.8□□□□□ -1.48
CLF1YLR117C GCN2P15442 1659 aa5.8□□□□□ -1.48
CLF1YLR117C MSP1P28737 362 aa5.79□□□□□ -1.48
CLF1YLR117C PLP2Q12017 286 aa5.79□□□□□ -1.48
CLF1YLR117C NUP159P40477 1460 aa5.79□□□□□ -1.48
CLF1YLR117C NTE1Q04958 1679 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms