RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W MAM3Q12296 706 aa6.99□□□□□ -1.29
CTK1YKL139W RLF2Q12495 606 aa6.99□□□□□ -1.29
CTK1YKL139W REF2P42073 533 aaPredicted RBP6.99□□□□□ -1.29
CTK1YKL139W GLC3P32775 704 aa6.98□□□□□ -1.29
CTK1YKL139W YFR006WP43590 535 aa6.98□□□□□ -1.29
CTK1YKL139W IES2P40154 320 aa6.97□□□□□ -1.29
CTK1YKL139W DBP1P24784 617 aaKnown RBP6.96□□□□□ -1.29
CTK1YKL139W IOC2Q12072 812 aa6.95□□□□□ -1.3
CTK1YKL139W DIT2P21595 489 aa6.94□□□□□ -1.3
CTK1YKL139W NUP42P49686 430 aaKnown RBP6.94□□□□□ -1.3
CTK1YKL139W AIM7Q12156 149 aa6.93□□□□□ -1.3
CTK1YKL139W PTC3P34221 468 aaKnown RBP6.91□□□□□ -1.3
CTK1YKL139W MAK21Q12176 1025 aaKnown RBP6.89□□□□□ -1.31
CTK1YKL139W COX6P00427 148 aa6.88□□□□□ -1.31
CTK1YKL139W HGH1P48362 394 aaKnown RBP6.86□□□□□ -1.31
CTK1YKL139W GUA1P38625 525 aaKnown RBP6.86□□□□□ -1.31
CTK1YKL139W ATF2P53296 535 aa6.85□□□□□ -1.31
CTK1YKL139W PIB1Q06651 286 aa6.84□□□□□ -1.31
CTK1YKL139W EAP1P36041 632 aaKnown RBP6.83□□□□□ -1.32
CTK1YKL139W RTG1P32607 177 aa6.82□□□□□ -1.32
CTK1YKL139W NCR1Q12200 1170 aa6.82□□□□□ -1.32
CTK1YKL139W VHR2P40041 505 aa6.82□□□□□ -1.32
CTK1YKL139W YDR090CQ03193 310 aa6.8□□□□□ -1.32
CTK1YKL139W MSB4Q12317 492 aa6.8□□□□□ -1.32
CTK1YKL139W VMA1P17255 1071 aaKnown RBP6.79□□□□□ -1.32
CTK1YKL139W UBP14P38237 781 aaKnown RBP6.79□□□□□ -1.32
CTK1YKL139W ATH1P48016 1211 aa6.78□□□□□ -1.32
CTK1YKL139W HPC2Q01448 625 aa6.77□□□□□ -1.33
CTK1YKL139W YLR326WQ06170 240 aaKnown RBP6.77□□□□□ -1.33
CTK1YKL139W BCK2P33306 851 aa6.76□□□□□ -1.33
CTK1YKL139W GRE2Q12068 342 aaKnown RBP6.76□□□□□ -1.33
CTK1YKL139W GUT1P32190 709 aa6.75□□□□□ -1.33
CTK1YKL139W TFB3Q03290 321 aa6.74□□□□□ -1.33
CTK1YKL139W KIC1P38692 1080 aa6.74□□□□□ -1.33
CTK1YKL139W RGA2Q06407 1009 aa6.74□□□□□ -1.33
CTK1YKL139W SEC61P32915 480 aa6.73□□□□□ -1.33
CTK1YKL139W YGR273CP53329 174 aa6.72□□□□□ -1.33
CTK1YKL139W YNL035CP53962 389 aaKnown RBP6.71□□□□□ -1.34
CTK1YKL139W TRP5P00931 707 aaKnown RBP6.7□□□□□ -1.34
CTK1YKL139W TFG1P41895 735 aaPredicted RBP6.7□□□□□ -1.34
CTK1YKL139W PSE1P32337 1089 aaKnown RBP6.69□□□□□ -1.34
CTK1YKL139W RAD54P32863 898 aa6.69□□□□□ -1.34
CTK1YKL139W BRL1P38770 471 aa6.69□□□□□ -1.34
CTK1YKL139W KEX1P09620 729 aa6.69□□□□□ -1.34
CTK1YKL139W PCS60P38137 543 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
CTK1YKL139W SAM3Q08986 587 aa6.69□□□□□ -1.34
CTK1YKL139W PKC1P24583 1151 aa6.68□□□□□ -1.34
CTK1YKL139W SOL3P38858 249 aa6.68□□□□□ -1.34
CTK1YKL139W SET4P42948 560 aa6.67□□□□□ -1.34
CTK1YKL139W CSN12P47130 423 aa6.67□□□□□ -1.34
CTK1YKL139W GYP5Q12344 894 aa6.67□□□□□ -1.34
CTK1YKL139W SSA2P10592 639 aaKnown RBP6.66□□□□□ -1.34
CTK1YKL139W YOL036WQ08206 761 aa6.64□□□□□ -1.35
CTK1YKL139W CHL1P22516 861 aaPredicted RBP6.63□□□□□ -1.35
CTK1YKL139W ORC6P38826 435 aa6.63□□□□□ -1.35
CTK1YKL139W TEA1P47988 759 aa6.62□□□□□ -1.35
CTK1YKL139W DCW1P36091 449 aa6.61□□□□□ -1.35
CTK1YKL139W SAP30P38429 201 aa6.61□□□□□ -1.35
CTK1YKL139W BIM1P40013 344 aa6.61□□□□□ -1.35
CTK1YKL139W YJL007CP47080 104 aa6.61□□□□□ -1.35
CTK1YKL139W NST1P53935 1240 aa6.61□□□□□ -1.35
CTK1YKL139W KTR1P27810 393 aaKnown RBP6.6□□□□□ -1.35
CTK1YKL139W GLN1P32288 370 aaKnown RBP6.59□□□□□ -1.35
CTK1YKL139W ATG32P40458 529 aa6.58□□□□□ -1.36
CTK1YKL139W TYW1Q08960 810 aaKnown RBP6.58□□□□□ -1.36
CTK1YKL139W RGR1P19263 1082 aa6.57□□□□□ -1.36
CTK1YKL139W ILV3P39522 585 aaKnown RBP6.56□□□□□ -1.36
CTK1YKL139W SUB2Q07478 446 aaKnown RBP6.56□□□□□ -1.36
CTK1YKL139W SSA1P10591 642 aaKnown RBP6.55□□□□□ -1.36
CTK1YKL139W PRE3P38624 215 aa6.55□□□□□ -1.36
CTK1YKL139W MVP1P40959 511 aaKnown RBP6.55□□□□□ -1.36
CTK1YKL139W AI4P03878 556 aa6.54□□□□□ -1.36
CTK1YKL139W HTA1P04911 132 aaKnown RBP6.54□□□□□ -1.36
CTK1YKL139W HTA2P04912 132 aa6.54□□□□□ -1.36
CTK1YKL139W MPH3P0CE00 602 aa6.54□□□□□ -1.36
CTK1YKL139W CLB5P30283 435 aa6.53□□□□□ -1.36
CTK1YKL139W GEF1P37020 779 aa6.52□□□□□ -1.36
CTK1YKL139W YBL036CP38197 257 aa6.52□□□□□ -1.36
CTK1YKL139W XDJ1P39102 459 aa6.52□□□□□ -1.36
CTK1YKL139W RPL34BP40525 121 aaKnown RBP6.52□□□□□ -1.36
CTK1YKL139W NIS1P53939 407 aa6.52□□□□□ -1.36
CTK1YKL139W TIF1P10081 395 aaKnown RBP6.52□□□□□ -1.37
CTK1YKL139W YML020WQ03722 664 aa6.52□□□□□ -1.37
CTK1YKL139W YDL129WQ07555 291 aa6.52□□□□□ -1.37
CTK1YKL139W ERG12P07277 443 aa6.51□□□□□ -1.37
CTK1YKL139W GAP1P19145 602 aaPredicted RBP6.51□□□□□ -1.37
CTK1YKL139W FPK1P53739 893 aa6.51□□□□□ -1.37
CTK1YKL139W YMR196WQ04336 1088 aa6.51□□□□□ -1.37
CTK1YKL139W SLI15P38283 698 aa6.5□□□□□ -1.37
CTK1YKL139W HST2P53686 357 aa6.5□□□□□ -1.37
CTK1YKL139W SSA4P22202 642 aaKnown RBP6.49□□□□□ -1.37
CTK1YKL139W CSC1Q06538 782 aa6.49□□□□□ -1.37
CTK1YKL139W SCJ1P25303 377 aa6.48□□□□□ -1.37
CTK1YKL139W BIO2P32451 375 aa6.48□□□□□ -1.37
CTK1YKL139W SLX8P40072 274 aa6.48□□□□□ -1.37
CTK1YKL139W PKH3Q03306 898 aaPredicted RBP6.48□□□□□ -1.37
CTK1YKL139W JIP4Q03361 876 aa6.48□□□□□ -1.37
CTK1YKL139W YPR109WQ06104 294 aa6.48□□□□□ -1.37
CTK1YKL139W ESS1P22696 170 aa6.48□□□□□ -1.37
CTK1YKL139W DAN4P47179 1161 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms