RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C TY1B-GR1Q12141 1755 aa9.73□□□□□ -0.85
MDE1YJR024C TY1B-BLQ12490 1755 aa9.73□□□□□ -0.85
MDE1YJR024C SPP41P38904 1435 aa9.73□□□□□ -0.85
MDE1YJR024C PAN1P32521 1480 aa9.72□□□□□ -0.85
MDE1YJR024C SAS10Q12136 610 aaPredicted RBP9.71□□□□□ -0.86
MDE1YJR024C RPA190P10964 1664 aaKnown RBP9.71□□□□□ -0.86
MDE1YJR024C SNQ2P32568 1501 aaKnown RBP9.7□□□□□ -0.86
MDE1YJR024C VTH1P40438 1549 aa9.69□□□□□ -0.86
MDE1YJR024C VTH2P40890 1549 aa9.69□□□□□ -0.86
MDE1YJR024C NTE1Q04958 1679 aa9.65□□□□□ -0.86
MDE1YJR024C DNF1P32660 1571 aa9.64□□□□□ -0.87
MDE1YJR024C TSC11P40061 1430 aa9.64□□□□□ -0.87
MDE1YJR024C STH1P32597 1359 aa9.63□□□□□ -0.87
MDE1YJR024C ULS1Q08562 1619 aa9.63□□□□□ -0.87
MDE1YJR024C RPO21P04050 1733 aaKnown RBP9.62□□□□□ -0.87
MDE1YJR024C PDR15Q04182 1529 aaKnown RBP9.62□□□□□ -0.87
MDE1YJR024C TAF7Q05021 590 aa9.61□□□□□ -0.87
MDE1YJR024C TRM732Q03496 1420 aa9.61□□□□□ -0.87
MDE1YJR024C SPT21P35209 758 aa9.6□□□□□ -0.87
MDE1YJR024C SNT2P53127 1403 aa9.51□□□□□ -0.89
MDE1YJR024C YRF1-1P0CX20 1796 aa9.51□□□□□ -0.89
MDE1YJR024C YRF1-5P0CX21 1796 aa9.51□□□□□ -0.89
MDE1YJR024C YRF1-8P0CX22 1796 aa9.51□□□□□ -0.89
MDE1YJR024C IFH1P39520 1085 aa9.5□□□□□ -0.89
MDE1YJR024C NUP159P40477 1460 aa9.49□□□□□ -0.89
MDE1YJR024C GEA1P47102 1408 aaPredicted RBP9.48□□□□□ -0.89
MDE1YJR024C MET5P47169 1442 aa9.47□□□□□ -0.89
MDE1YJR024C GEA2P39993 1459 aaKnown RBP9.47□□□□□ -0.89
MDE1YJR024C YBT1P32386 1661 aa9.46□□□□□ -0.89
MDE1YJR024C RIM101P33400 625 aa9.46□□□□□ -0.9
MDE1YJR024C RTT106P40161 455 aa9.45□□□□□ -0.9
MDE1YJR024C IRC20Q06554 1556 aa9.45□□□□□ -0.9
MDE1YJR024C TY3B-GQ99315 1547 aa9.42□□□□□ -0.9
MDE1YJR024C SPO14P36126 1683 aa9.42□□□□□ -0.9
MDE1YJR024C YCK3P39962 524 aa9.41□□□□□ -0.9
MDE1YJR024C MRPL32P25348 183 aa9.39□□□□□ -0.91
MDE1YJR024C IKI3Q06706 1349 aaKnown RBP9.38□□□□□ -0.91
MDE1YJR024C VPS15P22219 1454 aa9.38□□□□□ -0.91
MDE1YJR024C NUP170P38181 1502 aa9.36□□□□□ -0.91
MDE1YJR024C PDR12Q02785 1511 aa9.36□□□□□ -0.91
MDE1YJR024C GDB1Q06625 1536 aa9.35□□□□□ -0.91
MDE1YJR024C CAT8P39113 1433 aa9.34□□□□□ -0.91
MDE1YJR024C MET10P39692 1035 aa9.32□□□□□ -0.92
MDE1YJR024C YKR023WP36119 530 aaKnown RBP9.31□□□□□ -0.92
MDE1YJR024C PDR10P51533 1564 aa9.31□□□□□ -0.92
MDE1YJR024C ARO1P08566 1588 aaKnown RBP9.29□□□□□ -0.92
MDE1YJR024C NUP157P40064 1391 aaKnown RBP9.28□□□□□ -0.92
MDE1YJR024C HAA1Q12753 694 aaKnown RBP9.28□□□□□ -0.92
MDE1YJR024C LTE1P07866 1435 aa9.26□□□□□ -0.93
MDE1YJR024C BUD3P25558 1636 aa9.25□□□□□ -0.93
MDE1YJR024C SSM4P40318 1319 aa9.25□□□□□ -0.93
MDE1YJR024C OXP1P28273 1286 aa9.21□□□□□ -0.94
MDE1YJR024C CKB1P43639 278 aa9.21□□□□□ -0.94
MDE1YJR024C IQG1Q12280 1495 aa9.21□□□□□ -0.94
MDE1YJR024C SEC7P11075 2009 aaKnown RBP9.21□□□□□ -0.94
MDE1YJR024C SRB8P25648 1427 aa9.2□□□□□ -0.94
MDE1YJR024C DOP1Q03921 1698 aa9.2□□□□□ -0.94
MDE1YJR024C CHC1P22137 1653 aaKnown RBP9.16□□□□□ -0.94
MDE1YJR024C PTP3P40048 928 aa9.15□□□□□ -0.94
MDE1YJR024C DRS2P39524 1355 aa9.14□□□□□ -0.95
MDE1YJR024C BNI1P41832 1953 aa9.14□□□□□ -0.95
MDE1YJR024C GCN2P15442 1659 aa9.13□□□□□ -0.95
MDE1YJR024C HOP09932 586 aa9.13□□□□□ -0.95
MDE1YJR024C CDC27P38042 758 aa9.13□□□□□ -0.95
MDE1YJR024C YSP2Q06681 1438 aa9.13□□□□□ -0.95
MDE1YJR024C TFC8Q12308 588 aa9.11□□□□□ -0.95
MDE1YJR024C MMS1Q06211 1407 aa9.1□□□□□ -0.95
MDE1YJR024C TRM3Q07527 1436 aa9.1□□□□□ -0.95
MDE1YJR024C DCD1P06773 312 aa9.08□□□□□ -0.96
MDE1YJR024C BUD21Q08492 214 aaPredicted RBP9.07□□□□□ -0.96
MDE1YJR024C BNR1P40450 1375 aa9.07□□□□□ -0.96
MDE1YJR024C ITT1Q04638 464 aa9.05□□□□□ -0.96
MDE1YJR024C YAH1Q12184 172 aaKnown RBP9.05□□□□□ -0.96
MDE1YJR024C SSP1P38871 571 aa9.03□□□□□ -0.96
MDE1YJR024C YOR093CQ12275 1648 aa9.02□□□□□ -0.96
MDE1YJR024C YIL055CP40523 627 aaKnown RBP9.02□□□□□ -0.97
MDE1YJR024C DNF2Q12675 1612 aa8.98□□□□□ -0.97
MDE1YJR024C NUP188P52593 1655 aaKnown RBP8.97□□□□□ -0.97
MDE1YJR024C PDR5P33302 1511 aaKnown RBP8.95□□□□□ -0.98
MDE1YJR024C VMR1P38735 1592 aa8.95□□□□□ -0.98
MDE1YJR024C YLR271WQ06152 274 aa8.93□□□□□ -0.98
MDE1YJR024C RSM7P47150 247 aa8.9□□□□□ -0.98
MDE1YJR024C IML1P47170 1584 aa8.9□□□□□ -0.99
MDE1YJR024C PAF1P38351 445 aa8.89□□□□□ -0.99
MDE1YJR024C NOP7P53261 605 aaKnown RBP8.89□□□□□ -0.99
MDE1YJR024C BCH2P36122 765 aa8.85□□□□□ -0.99
MDE1YJR024C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
MDE1YJR024C URN1Q06525 465 aaKnown RBP8.83□□□□□ -1
MDE1YJR024C DNF3Q12674 1656 aa8.81□□□□□ -1
MDE1YJR024C PDR11P40550 1411 aa8.81□□□□□ -1
MDE1YJR024C RAV1P47104 1357 aa8.8□□□□□ -1
MDE1YJR024C YAP3P38749 330 aa8.77□□□□□ -1.01
MDE1YJR024C IPL1P38991 367 aa8.77□□□□□ -1.01
MDE1YJR024C POL5P39985 1022 aaKnown RBP8.77□□□□□ -1.01
MDE1YJR024C NUP192P47054 1683 aa8.77□□□□□ -1.01
MDE1YJR024C RTC1Q08281 1341 aa8.76□□□□□ -1.01
MDE1YJR024C ABP1P15891 592 aaKnown RBP8.75□□□□□ -1.01
MDE1YJR024C YGL015CP33199 130 aa8.75□□□□□ -1.01
MDE1YJR024C TYS1P36421 394 aaKnown RBP8.75□□□□□ -1.01
MDE1YJR024C AI2P03876 854 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms