RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W YNL035CP53962 389 aaKnown RBP9.53□□□□□ -0.88
RPB4YJL140W RAM2P29703 316 aa9.52□□□□□ -0.89
RPB4YJL140W MAK11P20484 414 aaKnown RBP9.51□□□□□ -0.89
RPB4YJL140W SEC61P32915 480 aa9.49□□□□□ -0.89
RPB4YJL140W ABP1P15891 592 aaKnown RBP9.48□□□□□ -0.89
RPB4YJL140W DCW1P36091 449 aa9.48□□□□□ -0.89
RPB4YJL140W HTA1P04911 132 aaKnown RBP9.46□□□□□ -0.9
RPB4YJL140W HTA2P04912 132 aa9.46□□□□□ -0.9
RPB4YJL140W MIF2P35201 549 aa9.45□□□□□ -0.9
RPB4YJL140W TFG1P41895 735 aaPredicted RBP9.45□□□□□ -0.9
RPB4YJL140W JIP4Q03361 876 aa9.43□□□□□ -0.9
RPB4YJL140W ECM5Q03214 1411 aa9.41□□□□□ -0.9
RPB4YJL140W DAN4P47179 1161 aa9.4□□□□□ -0.9
RPB4YJL140W GRE2Q12068 342 aaKnown RBP9.4□□□□□ -0.9
RPB4YJL140W HIR3P47171 1648 aa9.38□□□□□ -0.91
RPB4YJL140W YEL023CP39992 682 aa9.38□□□□□ -0.91
RPB4YJL140W PTC4P38089 393 aa9.37□□□□□ -0.91
RPB4YJL140W COQ8P27697 501 aa9.36□□□□□ -0.91
RPB4YJL140W BUD4P47136 1447 aa9.36□□□□□ -0.91
RPB4YJL140W ATH1P48016 1211 aa9.35□□□□□ -0.91
RPB4YJL140W THO2P53552 1597 aaKnown RBP9.35□□□□□ -0.91
RPB4YJL140W EDS1P38073 919 aa9.34□□□□□ -0.91
RPB4YJL140W SAP30P38429 201 aa9.34□□□□□ -0.91
RPB4YJL140W NOP53Q12080 455 aaKnown RBP9.34□□□□□ -0.91
RPB4YJL140W PTC3P34221 468 aaKnown RBP9.33□□□□□ -0.92
RPB4YJL140W YDL129WQ07555 291 aa9.32□□□□□ -0.92
RPB4YJL140W GUT1P32190 709 aa9.3□□□□□ -0.92
RPB4YJL140W MDS3P53094 1487 aa9.28□□□□□ -0.92
RPB4YJL140W PML39Q03760 334 aa9.21□□□□□ -0.94
RPB4YJL140W XRN1P22147 1528 aaKnown RBP9.21□□□□□ -0.94
RPB4YJL140W SET1P38827 1080 aaKnown RBP9.2□□□□□ -0.94
RPB4YJL140W CHL1P22516 861 aaPredicted RBP9.17□□□□□ -0.94
RPB4YJL140W PRE3P38624 215 aa9.15□□□□□ -0.94
RPB4YJL140W SOL3P38858 249 aa9.15□□□□□ -0.94
RPB4YJL140W NST1P53935 1240 aa9.14□□□□□ -0.95
RPB4YJL140W PEP1P32319 1579 aa9.13□□□□□ -0.95
RPB4YJL140W IFH1P39520 1085 aa9.11□□□□□ -0.95
RPB4YJL140W REV3P14284 1504 aa9.1□□□□□ -0.95
RPB4YJL140W MID1P41821 548 aa9.1□□□□□ -0.95
RPB4YJL140W MPH3P0CE00 602 aa9.09□□□□□ -0.95
RPB4YJL140W BCK2P33306 851 aa9.09□□□□□ -0.95
RPB4YJL140W ELP4Q02884 456 aaKnown RBP9.09□□□□□ -0.95
RPB4YJL140W AI4P03878 556 aa9.08□□□□□ -0.96
RPB4YJL140W ATG2P53855 1592 aa9.07□□□□□ -0.96
RPB4YJL140W YDR344CQ05510 147 aa9.07□□□□□ -0.96
RPB4YJL140W YGR273CP53329 174 aa9.05□□□□□ -0.96
RPB4YJL140W BPT1P14772 1559 aa9.04□□□□□ -0.96
RPB4YJL140W PEX29Q03370 554 aa9.04□□□□□ -0.96
RPB4YJL140W ILV3P39522 585 aaKnown RBP9.02□□□□□ -0.97
RPB4YJL140W ARH1P48360 493 aa9□□□□□ -0.97
RPB4YJL140W VRP1P37370 817 aa8.98□□□□□ -0.97
RPB4YJL140W DMA1P38823 416 aa8.98□□□□□ -0.97
RPB4YJL140W YPR148CQ06523 435 aa8.98□□□□□ -0.97
RPB4YJL140W SKI3P17883 1432 aaKnown RBP8.96□□□□□ -0.98
RPB4YJL140W SSN2P38931 1420 aa8.95□□□□□ -0.98
RPB4YJL140W RQC2Q12532 1038 aaKnown RBP8.94□□□□□ -0.98
RPB4YJL140W TAF2P23255 1407 aa8.94□□□□□ -0.98
RPB4YJL140W SPT23P35210 1082 aa8.92□□□□□ -0.98
RPB4YJL140W HAP5Q02516 242 aa8.92□□□□□ -0.98
RPB4YJL140W SLI15P38283 698 aa8.91□□□□□ -0.98
RPB4YJL140W MPC54Q08550 464 aa8.91□□□□□ -0.98
RPB4YJL140W SIN3P22579 1536 aa8.9□□□□□ -0.98
RPB4YJL140W KEX1P09620 729 aa8.9□□□□□ -0.98
RPB4YJL140W UBP14P38237 781 aaKnown RBP8.89□□□□□ -0.99
RPB4YJL140W SSK2P53599 1579 aa8.89□□□□□ -0.99
RPB4YJL140W YCF1P39109 1515 aaKnown RBP8.89□□□□□ -0.99
RPB4YJL140W XDJ1P39102 459 aa8.88□□□□□ -0.99
RPB4YJL140W VPS70P47161 811 aa8.87□□□□□ -0.99
RPB4YJL140W REF2P42073 533 aaPredicted RBP8.86□□□□□ -0.99
RPB4YJL140W NMA111P53920 997 aa8.86□□□□□ -0.99
RPB4YJL140W YLR326WQ06170 240 aaKnown RBP8.86□□□□□ -0.99
RPB4YJL140W VHR2P40041 505 aa8.85□□□□□ -0.99
RPB4YJL140W DPL1Q05567 589 aa8.85□□□□□ -0.99
RPB4YJL140W CKB1P43639 278 aa8.83□□□□□ -1
RPB4YJL140W BNI4P53858 892 aa8.83□□□□□ -1
RPB4YJL140W RAD54P32863 898 aa8.82□□□□□ -1
RPB4YJL140W PTC2P39966 464 aaKnown RBP8.82□□□□□ -1
RPB4YJL140W SAS10Q12136 610 aaPredicted RBP8.81□□□□□ -1
RPB4YJL140W RPP1BP10622 106 aaKnown RBP8.79□□□□□ -1
RPB4YJL140W PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1 RIP-Chip
RPB4YJL140W KIC1P38692 1080 aa8.79□□□□□ -1
RPB4YJL140W MAK21Q12176 1025 aaKnown RBP8.79□□□□□ -1
RPB4YJL140W ESP1Q03018 1630 aa8.79□□□□□ -1
RPB4YJL140W UFD4P33202 1483 aa8.78□□□□□ -1
RPB4YJL140W YML082WQ04533 649 aaKnown RBP8.77□□□□□ -1.01
RPB4YJL140W CDC73Q06697 393 aa8.77□□□□□ -1.01
RPB4YJL140W YDR090CQ03193 310 aa8.76□□□□□ -1.01
RPB4YJL140W ISU2Q12056 156 aa8.75□□□□□ -1.01
RPB4YJL140W COX6P00427 148 aa8.73□□□□□ -1.01
RPB4YJL140W DPS1P04802 557 aaKnown RBP8.7□□□□□ -1.02
RPB4YJL140W SCC2Q04002 1493 aa8.7□□□□□ -1.02
RPB4YJL140W MYO2P19524 1574 aaKnown RBP8.69□□□□□ -1.02
RPB4YJL140W YPK9Q12697 1472 aa8.69□□□□□ -1.02
RPB4YJL140W PBS2P08018 668 aa8.67□□□□□ -1.02
RPB4YJL140W CDC25P04821 1589 aa8.65□□□□□ -1.02
RPB4YJL140W CHD1P32657 1468 aa8.64□□□□□ -1.03
RPB4YJL140W CSC1Q06538 782 aa8.64□□□□□ -1.03
RPB4YJL140W YPR015CQ12531 247 aa8.64□□□□□ -1.03
RPB4YJL140W RPO31P04051 1460 aa8.64□□□□□ -1.03
RPB4YJL140W MET5P47169 1442 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms