RNA–Protein interactions for RNA: YJL112W

MDV1, Transcript of Peripheral protein of cytosolic face of mitochondrial outer membrane, yeast

Gene MDV1, Length 2,145 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDV1	YJL112W	MRM1	P25270	412 aa		4.4	□□□□□ -1.7
MDV1	YJL112W	PSD2	P53037	1138 aa	Known RBP	4.4	□□□□□ -1.71
MDV1	YJL112W	PRE3	P38624	215 aa		4.39	□□□□□ -1.71
MDV1	YJL112W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	RIP-Chip
MDV1	YJL112W	YRB30	P53107	440 aa	Predicted RBP	4.38	□□□□□ -1.71
MDV1	YJL112W	YDL129W	Q07555	291 aa		4.38	□□□□□ -1.71
MDV1	YJL112W	SPB4	P25808	606 aa	Predicted RBP	4.37	□□□□□ -1.71
MDV1	YJL112W	SLX8	P40072	274 aa		4.36	□□□□□ -1.71
MDV1	YJL112W	JIP4	Q03361	876 aa		4.36	□□□□□ -1.71
MDV1	YJL112W	CST9	Q06032	482 aa		4.36	□□□□□ -1.71
MDV1	YJL112W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
MDV1	YJL112W	SNU71	P53207	620 aa	Known RBP	4.36	□□□□□ -1.71
MDV1	YJL112W	DBP1	P24784	617 aa	Known RBP	4.35	□□□□□ -1.71
MDV1	YJL112W	XDJ1	P39102	459 aa		4.35	□□□□□ -1.71
MDV1	YJL112W	RGA2	Q06407	1009 aa		4.35	□□□□□ -1.71
MDV1	YJL112W	VRP1	P37370	817 aa		4.34	□□□□□ -1.71
MDV1	YJL112W	MGA2	P40578	1113 aa		4.34	□□□□□ -1.71
MDV1	YJL112W	YFR006W	P43590	535 aa		4.34	□□□□□ -1.71
MDV1	YJL112W	VMA1	P17255	1071 aa	Known RBP	4.34	□□□□□ -1.71
MDV1	YJL112W	KIN1	P13185	1064 aa		4.33	□□□□□ -1.72
MDV1	YJL112W	DAN4	P47179	1161 aa		4.33	□□□□□ -1.72
MDV1	YJL112W	YPR148C	Q06523	435 aa		4.33	□□□□□ -1.72
MDV1	YJL112W	DPS1	P04802	557 aa	Known RBP	4.32	□□□□□ -1.72
MDV1	YJL112W	SAM3	Q08986	587 aa		4.32	□□□□□ -1.72
MDV1	YJL112W	SSA1	P10591	642 aa	Known RBP	4.31	□□□□□ -1.72
MDV1	YJL112W	GEF1	P37020	779 aa		4.31	□□□□□ -1.72
MDV1	YJL112W	HGH1	P48362	394 aa	Known RBP	4.31	□□□□□ -1.72
MDV1	YJL112W	NOP7	P53261	605 aa	Known RBP	4.31	□□□□□ -1.72
MDV1	YJL112W	DSF2	P38213	736 aa		4.3	□□□□□ -1.72
MDV1	YJL112W	RCR1	P38212	213 aa		4.29	□□□□□ -1.72
MDV1	YJL112W	MRX12	P47084	519 aa		4.29	□□□□□ -1.72
MDV1	YJL112W	HTA1	P04911	132 aa	Known RBP	4.28	□□□□□ -1.72
MDV1	YJL112W	HTA2	P04912	132 aa		4.28	□□□□□ -1.72
MDV1	YJL112W	YNR021W	P53723	404 aa	Known RBP	4.28	□□□□□ -1.72
MDV1	YJL112W	MAM3	Q12296	706 aa		4.28	□□□□□ -1.72
MDV1	YJL112W	GYP5	Q12344	894 aa		4.28	□□□□□ -1.72
MDV1	YJL112W	BRL1	P38770	471 aa		4.28	□□□□□ -1.72
MDV1	YJL112W	VPS70	P47161	811 aa		4.28	□□□□□ -1.72
MDV1	YJL112W	VPS29	P38759	282 aa		4.27	□□□□□ -1.73
MDV1	YJL112W	ELP4	Q02884	456 aa	Known RBP	4.27	□□□□□ -1.73
MDV1	YJL112W	SUB2	Q07478	446 aa	Known RBP	4.27	□□□□□ -1.73
MDV1	YJL112W	DCW1	P36091	449 aa		4.27	□□□□□ -1.73
MDV1	YJL112W	PTC4	P38089	393 aa		4.27	□□□□□ -1.73
MDV1	YJL112W	AIM7	Q12156	149 aa		4.27	□□□□□ -1.73
MDV1	YJL112W	PAM1	P37304	830 aa	Known RBP	4.26	□□□□□ -1.73
MDV1	YJL112W	SET1	P38827	1080 aa	Known RBP	4.26	□□□□□ -1.73
MDV1	YJL112W	RTG3	P38165	486 aa		4.25	□□□□□ -1.73
MDV1	YJL112W	GUA1	P38625	525 aa	Known RBP	4.25	□□□□□ -1.73
MDV1	YJL112W	STS1	P38637	319 aa		4.25	□□□□□ -1.73
MDV1	YJL112W	ATG36	P46983	293 aa		4.25	□□□□□ -1.73
MDV1	YJL112W	YEL023C	P39992	682 aa		4.25	□□□□□ -1.73
MDV1	YJL112W	RGA1	P39083	1007 aa		4.24	□□□□□ -1.73
MDV1	YJL112W	SWE1	P32944	819 aa		4.23	□□□□□ -1.73
MDV1	YJL112W	FAR11	P53917	953 aa		4.23	□□□□□ -1.73
MDV1	YJL112W	DOS2	P54858	310 aa		4.23	□□□□□ -1.73
MDV1	YJL112W	GLC3	P32775	704 aa		4.22	□□□□□ -1.73
MDV1	YJL112W	NUG1	P40010	520 aa	Known RBP	4.22	□□□□□ -1.73
MDV1	YJL112W	YTA7	P40340	1379 aa		4.22	□□□□□ -1.73
MDV1	YJL112W	SPC42	P36094	363 aa		4.22	□□□□□ -1.73
MDV1	YJL112W	MET10	P39692	1035 aa		4.22	□□□□□ -1.73
MDV1	YJL112W	PBS2	P08018	668 aa		4.21	□□□□□ -1.74
MDV1	YJL112W	BRN1	P38170	754 aa		4.21	□□□□□ -1.74
MDV1	YJL112W	RAM2	P29703	316 aa		4.21	□□□□□ -1.74
MDV1	YJL112W	HPC2	Q01448	625 aa		4.21	□□□□□ -1.74
MDV1	YJL112W	LAM6	Q08001	693 aa		4.21	□□□□□ -1.74
MDV1	YJL112W	SLD2	P34252	453 aa		4.19	□□□□□ -1.74
MDV1	YJL112W	PML39	Q03760	334 aa		4.19	□□□□□ -1.74
MDV1	YJL112W	RRN6	P32786	894 aa		4.19	□□□□□ -1.74
MDV1	YJL112W	YDR344C	Q05510	147 aa		4.19	□□□□□ -1.74
MDV1	YJL112W	ASF1	P32447	279 aa		4.18	□□□□□ -1.74
MDV1	YJL112W	OCA5	P38738	679 aa		4.18	□□□□□ -1.74
MDV1	YJL112W	SEN54	Q02825	467 aa	Predicted RBP	4.17	□□□□□ -1.74
MDV1	YJL112W	TFB3	Q03290	321 aa		4.17	□□□□□ -1.74
MDV1	YJL112W	NUP42	P49686	430 aa	Known RBP	4.16	□□□□□ -1.74
MDV1	YJL112W	SUB1	P54000	292 aa	Known RBP	4.16	□□□□□ -1.74
MDV1	YJL112W	DIT2	P21595	489 aa		4.16	□□□□□ -1.74
MDV1	YJL112W	RTS3	P53289	263 aa		4.15	□□□□□ -1.74
MDV1	YJL112W	SSA4	P22202	642 aa	Known RBP	4.15	□□□□□ -1.75
MDV1	YJL112W	HEM3	P28789	327 aa		4.15	□□□□□ -1.75
MDV1	YJL112W	SRC1	Q03707	834 aa		4.15	□□□□□ -1.75
MDV1	YJL112W	MAK21	Q12176	1025 aa	Known RBP	4.15	□□□□□ -1.75
MDV1	YJL112W	GIN4	Q12263	1142 aa		4.15	□□□□□ -1.75
MDV1	YJL112W	VPS72	Q03388	795 aa		4.14	□□□□□ -1.75
MDV1	YJL112W	SSF1	P38789	453 aa	Predicted RBP	4.13	□□□□□ -1.75
MDV1	YJL112W	IES2	P40154	320 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	ARH1	P48360	493 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	TPO2	P53283	614 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	MDG1	P53885	366 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	PKC1	P24583	1151 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	GLN1	P32288	370 aa	Known RBP	4.13	□□□□□ -1.75
MDV1	YJL112W	OSW7	P43611	510 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	YJR008W	P47085	338 aa		4.13	□□□□□ -1.75
MDV1	YJL112W	SPT23	P35210	1082 aa		4.12	□□□□□ -1.75
MDV1	YJL112W	BIM1	P40013	344 aa		4.12	□□□□□ -1.75
MDV1	YJL112W	PEX29	Q03370	554 aa		4.12	□□□□□ -1.75
MDV1	YJL112W	YAF9	P53930	226 aa		4.11	□□□□□ -1.75
MDV1	YJL112W	FPR4	Q06205	392 aa	Predicted RBP	4.11	□□□□□ -1.75
MDV1	YJL112W	CDC3	P32457	520 aa	Known RBP	4.1	□□□□□ -1.75
MDV1	YJL112W	ATG32	P40458	529 aa		4.1	□□□□□ -1.75
MDV1	YJL112W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms