RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W TY2B-DR2Q03494 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY1B-DR1Q03855 1755 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-DR3Q07791 1770 aaKnown RBP9.52□□□□□ -0.88
VMA16YHR026W TY2B-OR1Q12113 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-DR1Q12472 1770 aa9.52□□□□□ -0.88
VMA16YHR026W TY2B-OR2Q12501 1770 aa9.52□□□□□ -0.88
VMA16YHR026W MMS1Q06211 1407 aa9.5□□□□□ -0.89
VMA16YHR026W PSD2P53037 1138 aaKnown RBP9.5□□□□□ -0.89
VMA16YHR026W CST9Q06032 482 aa9.5□□□□□ -0.89
VMA16YHR026W SLX5P32828 619 aaKnown RBP9.49□□□□□ -0.89
VMA16YHR026W MGA2P40578 1113 aa9.49□□□□□ -0.89
VMA16YHR026W TOP2P06786 1428 aaKnown RBP9.41□□□□□ -0.9
VMA16YHR026W TRM732Q03496 1420 aa9.41□□□□□ -0.9
VMA16YHR026W DRS2P39524 1355 aa9.41□□□□□ -0.9
VMA16YHR026W MMS22Q06164 1454 aa9.4□□□□□ -0.9
VMA16YHR026W TY1B-HO13535 1793 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-DR5P0C2I2 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-DR6P0C2I3 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-LR2P0C2I5 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-LR3P0C2I6 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY1B-PR1P0C2I9 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY1B-PR2P0C2J0 1756 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-PR3P0C2J1 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY1B-JR1P47098 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-ML2Q03434 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY1B-ER1Q03612 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-ML1Q04711 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY1B-GR2Q12269 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-OLQ12273 1755 aa9.4□□□□□ -0.91
VMA16YHR026W TY1B-PLQ12414 1755 aaKnown RBP9.4□□□□□ -0.91
VMA16YHR026W TY2B-BQ12491 1770 aa9.39□□□□□ -0.91
VMA16YHR026W IRC20Q06554 1556 aa9.38□□□□□ -0.91
VMA16YHR026W MRM1P25270 412 aa9.36□□□□□ -0.91
VMA16YHR026W YRF1-1P0CX20 1796 aa9.34□□□□□ -0.91
VMA16YHR026W YRF1-5P0CX21 1796 aa9.34□□□□□ -0.91
VMA16YHR026W YRF1-8P0CX22 1796 aa9.34□□□□□ -0.91
VMA16YHR026W VPS15P22219 1454 aa9.34□□□□□ -0.91
VMA16YHR026W TY1B-DR3Q99231 1755 aa9.33□□□□□ -0.92
VMA16YHR026W NUP159P40477 1460 aa9.33□□□□□ -0.92
VMA16YHR026W TIF4632P39936 914 aaKnown RBP9.29□□□□□ -0.92
VMA16YHR026W DNF2Q12675 1612 aa9.27□□□□□ -0.93
VMA16YHR026W SPP41P38904 1435 aa9.23□□□□□ -0.93
VMA16YHR026W RCR1P38212 213 aa9.21□□□□□ -0.94
VMA16YHR026W DMA1P38823 416 aa9.21□□□□□ -0.94
VMA16YHR026W TGL3P40308 642 aa9.21□□□□□ -0.94
VMA16YHR026W SMC4Q12267 1418 aa9.2□□□□□ -0.94
VMA16YHR026W NTE1Q04958 1679 aa9.2□□□□□ -0.94
VMA16YHR026W TY1B-JR2P47100 1755 aaKnown RBP9.19□□□□□ -0.94
VMA16YHR026W TY1B-ER2Q03619 1755 aa9.19□□□□□ -0.94
VMA16YHR026W TY1B-MR1Q04214 1755 aa9.19□□□□□ -0.94
VMA16YHR026W TY1B-MR2Q04670 1755 aaKnown RBP9.19□□□□□ -0.94
VMA16YHR026W TY1B-LR1Q12088 1755 aaKnown RBP9.19□□□□□ -0.94
VMA16YHR026W TY1B-NL1Q12112 1755 aa9.19□□□□□ -0.94
VMA16YHR026W TY1B-GR1Q12141 1755 aa9.19□□□□□ -0.94
VMA16YHR026W TY1B-BLQ12490 1755 aa9.19□□□□□ -0.94
VMA16YHR026W POL1P13382 1468 aa9.18□□□□□ -0.94
VMA16YHR026W TSC11P40061 1430 aa9.17□□□□□ -0.94
VMA16YHR026W RTG3P38165 486 aa9.16□□□□□ -0.94
VMA16YHR026W YOR1P53049 1477 aa9.15□□□□□ -0.94
VMA16YHR026W RPO21P04050 1733 aaKnown RBP9.15□□□□□ -0.94
VMA16YHR026W NUP170P38181 1502 aa9.15□□□□□ -0.95
VMA16YHR026W VTH1P40438 1549 aa9.15□□□□□ -0.95
VMA16YHR026W VTH2P40890 1549 aa9.15□□□□□ -0.95
VMA16YHR026W YOR093CQ12275 1648 aa9.11□□□□□ -0.95
VMA16YHR026W SNT2P53127 1403 aa9.1□□□□□ -0.95
VMA16YHR026W STU1P38198 1513 aa9.1□□□□□ -0.95
VMA16YHR026W RAM2P29703 316 aa9.09□□□□□ -0.95
VMA16YHR026W VPS29P38759 282 aa9.09□□□□□ -0.95
VMA16YHR026W MET10P39692 1035 aa9.07□□□□□ -0.96
VMA16YHR026W MYO4P32492 1471 aa9.07□□□□□ -0.96
VMA16YHR026W SPO14P36126 1683 aa9.05□□□□□ -0.96
VMA16YHR026W PIB1Q06651 286 aa9.05□□□□□ -0.96
VMA16YHR026W YAP5P40574 245 aa9.02□□□□□ -0.97
VMA16YHR026W ULS1Q08562 1619 aa9.02□□□□□ -0.97
VMA16YHR026W YMR1P47147 688 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
VMA16YHR026W YOR238WQ08634 303 aa9.01□□□□□ -0.97
VMA16YHR026W DOP1Q03921 1698 aa9□□□□□ -0.97
VMA16YHR026W DBP1P24784 617 aaKnown RBP8.99□□□□□ -0.97
VMA16YHR026W SNQ2P32568 1501 aaKnown RBP8.99□□□□□ -0.97
VMA16YHR026W NSR1P27476 414 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
VMA16YHR026W STS1P38637 319 aa8.98□□□□□ -0.97
VMA16YHR026W TRM3Q07527 1436 aa8.96□□□□□ -0.98
VMA16YHR026W RTT106P40161 455 aa8.93□□□□□ -0.98
VMA16YHR026W PDR12Q02785 1511 aa8.93□□□□□ -0.98
VMA16YHR026W PDR10P51533 1564 aa8.93□□□□□ -0.98
VMA16YHR026W IQG1Q12280 1495 aa8.92□□□□□ -0.98
VMA16YHR026W STH1P32597 1359 aa8.92□□□□□ -0.98
VMA16YHR026W MAK11P20484 414 aaKnown RBP8.92□□□□□ -0.98
VMA16YHR026W MST1P07236 462 aa8.88□□□□□ -0.99
VMA16YHR026W GDB1Q06625 1536 aa8.88□□□□□ -0.99
VMA16YHR026W YTA7P40340 1379 aa8.86□□□□□ -0.99
VMA16YHR026W NUP157P40064 1391 aaKnown RBP8.86□□□□□ -0.99
VMA16YHR026W PDR15Q04182 1529 aaKnown RBP8.85□□□□□ -0.99
VMA16YHR026W BUD3P25558 1636 aa8.84□□□□□ -0.99
VMA16YHR026W SET1P38827 1080 aaKnown RBP8.84□□□□□ -0.99
VMA16YHR026W COQ8P27697 501 aa8.83□□□□□ -1
VMA16YHR026W GTT3P39996 337 aa8.83□□□□□ -1
VMA16YHR026W VMA1P17255 1071 aaKnown RBP8.8□□□□□ -1
VMA16YHR026W EDS1P38073 919 aa8.8□□□□□ -1
VMA16YHR026W DNF3Q12674 1656 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms