RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W TY1B-LR1Q12088 1755 aaKnown RBP15.22■□□□□ 0.03
CPD1YGR247W TY1B-NL1Q12112 1755 aa15.22■□□□□ 0.03
CPD1YGR247W TY1B-GR1Q12141 1755 aa15.22■□□□□ 0.03
CPD1YGR247W TY1B-BLQ12490 1755 aa15.22■□□□□ 0.03
CPD1YGR247W NTE1Q04958 1679 aa15.22■□□□□ 0.03
CPD1YGR247W YFR006WP43590 535 aa15.21■□□□□ 0.03
CPD1YGR247W TSC11P40061 1430 aa15.2■□□□□ 0.02
CPD1YGR247W VTH1P40438 1549 aa15.17■□□□□ 0.02
CPD1YGR247W VTH2P40890 1549 aa15.17■□□□□ 0.02
CPD1YGR247W RPO21P04050 1733 aaKnown RBP15.14■□□□□ 0.01
CPD1YGR247W IRC20Q06554 1556 aa15.12■□□□□ 0.01
CPD1YGR247W MYO4P32492 1471 aa15.08■□□□□ 0
CPD1YGR247W DNF2Q12675 1612 aa15.02□□□□□ -0.01
CPD1YGR247W SNT2P53127 1403 aa15.01□□□□□ -0.01
CPD1YGR247W NUP170P38181 1502 aa14.98□□□□□ -0.01
CPD1YGR247W SNQ2P32568 1501 aaKnown RBP14.95□□□□□ -0.02
CPD1YGR247W MET10P39692 1035 aa14.91□□□□□ -0.02
CPD1YGR247W SPO14P36126 1683 aa14.9□□□□□ -0.02
CPD1YGR247W YTA7P40340 1379 aa14.88□□□□□ -0.03
CPD1YGR247W ULS1Q08562 1619 aa14.87□□□□□ -0.03
CPD1YGR247W STH1P32597 1359 aa14.85□□□□□ -0.03
CPD1YGR247W PDR12Q02785 1511 aa14.8□□□□□ -0.04
CPD1YGR247W RTT106P40161 455 aa14.77□□□□□ -0.05
CPD1YGR247W DOP1Q03921 1698 aa14.75□□□□□ -0.05
CPD1YGR247W TRM3Q07527 1436 aa14.74□□□□□ -0.05
CPD1YGR247W YOR093CQ12275 1648 aa14.71□□□□□ -0.05
CPD1YGR247W IQG1Q12280 1495 aa14.7□□□□□ -0.06
CPD1YGR247W GDB1Q06625 1536 aa14.69□□□□□ -0.06
CPD1YGR247W MLP2P40457 1679 aa14.68□□□□□ -0.06
CPD1YGR247W PDR10P51533 1564 aa14.68□□□□□ -0.06
CPD1YGR247W NUP157P40064 1391 aaKnown RBP14.64□□□□□ -0.07
CPD1YGR247W BUD3P25558 1636 aa14.62□□□□□ -0.07
CPD1YGR247W PDR15Q04182 1529 aaKnown RBP14.51□□□□□ -0.09
CPD1YGR247W ARO1P08566 1588 aaKnown RBP14.48□□□□□ -0.09
CPD1YGR247W CHC1P22137 1653 aaKnown RBP14.46□□□□□ -0.09
CPD1YGR247W DNF3Q12674 1656 aa14.39□□□□□ -0.11
CPD1YGR247W SAS10Q12136 610 aaPredicted RBP14.36□□□□□ -0.11
CPD1YGR247W TAF7Q05021 590 aa14.35□□□□□ -0.11
CPD1YGR247W SEC7P11075 2009 aaKnown RBP14.29□□□□□ -0.12
CPD1YGR247W YAP3P38749 330 aa14.28□□□□□ -0.12
CPD1YGR247W CAT8P39113 1433 aa14.28□□□□□ -0.12
CPD1YGR247W IFH1P39520 1085 aa14.27□□□□□ -0.13
CPD1YGR247W TY3B-GQ99315 1547 aa14.21□□□□□ -0.13
CPD1YGR247W BNR1P40450 1375 aa14.19□□□□□ -0.14
CPD1YGR247W YSP2Q06681 1438 aa14.18□□□□□ -0.14
CPD1YGR247W MAK10Q02197 733 aa14.18□□□□□ -0.14
CPD1YGR247W YBT1P32386 1661 aa14.17□□□□□ -0.14
CPD1YGR247W GEA1P47102 1408 aaPredicted RBP14.17□□□□□ -0.14
CPD1YGR247W CKB1P43639 278 aa14.14□□□□□ -0.15
CPD1YGR247W URN1Q06525 465 aaKnown RBP14.11□□□□□ -0.15
CPD1YGR247W USO1P25386 1790 aa14.02□□□□□ -0.16
CPD1YGR247W HAP1P0CE41 1502 aa13.91□□□□□ -0.18
CPD1YGR247W YMR196WQ04336 1088 aa13.9□□□□□ -0.18
CPD1YGR247W IPL1P38991 367 aa13.88□□□□□ -0.19
CPD1YGR247W SRB8P25648 1427 aa13.88□□□□□ -0.19
CPD1YGR247W IML1P47170 1584 aa13.87□□□□□ -0.19
CPD1YGR247W TY1B-NL2Q99337 1749 aaKnown RBP13.87□□□□□ -0.19
CPD1YGR247W THI12P42883 340 aa13.85□□□□□ -0.19
CPD1YGR247W THI5P43534 340 aa13.85□□□□□ -0.19
CPD1YGR247W THI11P47183 340 aa13.85□□□□□ -0.19
CPD1YGR247W THI13Q07748 340 aa13.85□□□□□ -0.19
CPD1YGR247W NUP188P52593 1655 aaKnown RBP13.82□□□□□ -0.2
CPD1YGR247W VMR1P38735 1592 aa13.77□□□□□ -0.21
CPD1YGR247W BUD21Q08492 214 aaPredicted RBP13.77□□□□□ -0.21
CPD1YGR247W TYS1P36421 394 aaKnown RBP13.76□□□□□ -0.21
CPD1YGR247W YAH1Q12184 172 aaKnown RBP13.61□□□□□ -0.23
CPD1YGR247W PDR5P33302 1511 aaKnown RBP13.6□□□□□ -0.23
CPD1YGR247W GLN1P32288 370 aaKnown RBP13.55□□□□□ -0.24
CPD1YGR247W YIL055CP40523 627 aaKnown RBP13.46□□□□□ -0.25
CPD1YGR247W PTP3P40048 928 aa13.45□□□□□ -0.26
CPD1YGR247W APP1P53933 587 aa13.45□□□□□ -0.26
CPD1YGR247W CFT1Q06632 1357 aaKnown RBP13.43□□□□□ -0.26
CPD1YGR247W KRE5P22023 1365 aa13.42□□□□□ -0.26
CPD1YGR247W MRX12P47084 519 aa13.4□□□□□ -0.26
CPD1YGR247W RIA1P53893 1110 aa13.39□□□□□ -0.27
CPD1YGR247W PDR11P40550 1411 aa13.38□□□□□ -0.27
CPD1YGR247W YNR029CP53729 429 aaKnown RBP13.36□□□□□ -0.27
CPD1YGR247W BCK1Q01389 1478 aa13.36□□□□□ -0.27
CPD1YGR247W IKI3Q06706 1349 aaKnown RBP13.34□□□□□ -0.27
CPD1YGR247W GCN2P15442 1659 aa13.29□□□□□ -0.28
CPD1YGR247W PRI1P10363 409 aa13.29□□□□□ -0.28
CPD1YGR247W REB1P21538 810 aa13.28□□□□□ -0.28
CPD1YGR247W YMR074CQ04773 145 aa13.27□□□□□ -0.29
CPD1YGR247W ENT1Q12518 454 aa13.23□□□□□ -0.29
CPD1YGR247W SSM4P40318 1319 aa13.22□□□□□ -0.29
CPD1YGR247W NUP192P47054 1683 aa13.21□□□□□ -0.3
CPD1YGR247W ENV9Q08651 330 aa13.19□□□□□ -0.3
CPD1YGR247W CAB1Q04430 367 aa13.17□□□□□ -0.3
CPD1YGR247W RAV1P47104 1357 aa13.17□□□□□ -0.3
CPD1YGR247W TY3B-IQ7LHG5 1498 aaKnown RBP13.15□□□□□ -0.3
CPD1YGR247W IMH1Q06704 911 aaKnown RBP13.14□□□□□ -0.31
CPD1YGR247W ALD4P46367 519 aaKnown RBP13.13□□□□□ -0.31
CPD1YGR247W RAD9P14737 1309 aa13.13□□□□□ -0.31
CPD1YGR247W PAF1P38351 445 aa13.12□□□□□ -0.31
CPD1YGR247W YRF1-2P40105 1681 aa13.08□□□□□ -0.32
CPD1YGR247W BUD31P25337 157 aaPredicted RBP13.07□□□□□ -0.32
CPD1YGR247W RTC1Q08281 1341 aa13.06□□□□□ -0.32
CPD1YGR247W RRP5Q05022 1729 aaKnown RBP13.05□□□□□ -0.32
CPD1YGR247W BFR2Q06631 534 aaKnown RBP13.03□□□□□ -0.32
CPD1YGR247W PRP45P28004 379 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms