RNA–Protein interactions for RNA: YGR217W

CCH1, Transcript of Voltage-gated high-affinity calcium channel, yeastyeast

Gene CCH1, Length 6,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCH1YGR217W UFD4P33202 1483 aa3.42□□□□□ -1.86
CCH1YGR217W SMC4Q12267 1418 aa3.41□□□□□ -1.86
CCH1YGR217W GDB1Q06625 1536 aa3.4□□□□□ -1.86
CCH1YGR217W DNF3Q12674 1656 aa3.4□□□□□ -1.87
CCH1YGR217W ARO1P08566 1588 aaKnown RBP3.4□□□□□ -1.87
CCH1YGR217W CHC1P22137 1653 aaKnown RBP3.39□□□□□ -1.87
CCH1YGR217W NUP170P38181 1502 aa3.38□□□□□ -1.87
CCH1YGR217W TY1B-NL2Q99337 1749 aaKnown RBP3.38□□□□□ -1.87
CCH1YGR217W SSN2P38931 1420 aa3.38□□□□□ -1.87
CCH1YGR217W POL1P13382 1468 aa3.37□□□□□ -1.87
CCH1YGR217W BUD3P25558 1636 aa3.35□□□□□ -1.87
CCH1YGR217W MLP2P40457 1679 aa3.34□□□□□ -1.87
CCH1YGR217W MMS22Q06164 1454 aa3.34□□□□□ -1.88
CCH1YGR217W MYO4P32492 1471 aa3.33□□□□□ -1.88
CCH1YGR217W YFR006WP43590 535 aa3.32□□□□□ -1.88
CCH1YGR217W MMS1Q06211 1407 aa3.32□□□□□ -1.88
CCH1YGR217W NUP159P40477 1460 aa3.31□□□□□ -1.88
CCH1YGR217W SEC7P11075 2009 aaKnown RBP3.31□□□□□ -1.88
CCH1YGR217W SNQ2P32568 1501 aaKnown RBP3.31□□□□□ -1.88
CCH1YGR217W VTH1P40438 1549 aa3.3□□□□□ -1.88
CCH1YGR217W VTH2P40890 1549 aa3.3□□□□□ -1.88
CCH1YGR217W ULS1Q08562 1619 aa3.3□□□□□ -1.88
CCH1YGR217W YOR1P53049 1477 aa3.3□□□□□ -1.88
CCH1YGR217W YRF1-2P40105 1681 aa3.28□□□□□ -1.88
CCH1YGR217W PDR10P51533 1564 aa3.28□□□□□ -1.88
CCH1YGR217W TSC11P40061 1430 aa3.27□□□□□ -1.89
CCH1YGR217W DRS2P39524 1355 aa3.25□□□□□ -1.89
CCH1YGR217W BCK1Q01389 1478 aa3.24□□□□□ -1.89
CCH1YGR217W ITT1Q04638 464 aa3.23□□□□□ -1.89
CCH1YGR217W STU1P38198 1513 aa3.22□□□□□ -1.89
CCH1YGR217W NUP188P52593 1655 aaKnown RBP3.21□□□□□ -1.9
CCH1YGR217W SPP41P38904 1435 aa3.21□□□□□ -1.9
CCH1YGR217W IML1P47170 1584 aa3.21□□□□□ -1.9
CCH1YGR217W IQG1Q12280 1495 aa3.2□□□□□ -1.9
CCH1YGR217W VMR1P38735 1592 aa3.18□□□□□ -1.9
CCH1YGR217W USO1P25386 1790 aa3.12□□□□□ -1.91
CCH1YGR217W EDE1P34216 1381 aa3.11□□□□□ -1.91
CCH1YGR217W CAT8P39113 1433 aa3.09□□□□□ -1.91
CCH1YGR217W YBT1P32386 1661 aa3.08□□□□□ -1.92
CCH1YGR217W SKI3P17883 1432 aaKnown RBP3.04□□□□□ -1.92
CCH1YGR217W PDR5P33302 1511 aaKnown RBP3.01□□□□□ -1.93
CCH1YGR217W YSP2Q06681 1438 aa3.01□□□□□ -1.93
CCH1YGR217W YLL066CQ99208 1374 aa3□□□□□ -1.93
CCH1YGR217W MTC1P47018 478 aaKnown RBP3□□□□□ -1.93
CCH1YGR217W YAH1Q12184 172 aaKnown RBP2.97□□□□□ -1.93
CCH1YGR217W SNF2P22082 1703 aa2.97□□□□□ -1.93
CCH1YGR217W TY3B-IQ7LHG5 1498 aaKnown RBP2.95□□□□□ -1.94
CCH1YGR217W NUP157P40064 1391 aaKnown RBP2.91□□□□□ -1.94
CCH1YGR217W NUP192P47054 1683 aa2.89□□□□□ -1.95
CCH1YGR217W CFT1Q06632 1357 aaKnown RBP2.89□□□□□ -1.95
CCH1YGR217W GCN2P15442 1659 aa2.89□□□□□ -1.95
CCH1YGR217W RRP5Q05022 1729 aaKnown RBP2.89□□□□□ -1.95
CCH1YGR217W GTT3P39996 337 aa2.89□□□□□ -1.95
CCH1YGR217W ABP1P15891 592 aaKnown RBP2.87□□□□□ -1.95
CCH1YGR217W STH1P32597 1359 aa2.87□□□□□ -1.95
CCH1YGR217W MET10P39692 1035 aa2.87□□□□□ -1.95
CCH1YGR217W POM152P39685 1337 aa2.87□□□□□ -1.95
CCH1YGR217W YTA7P40340 1379 aa2.87□□□□□ -1.95
CCH1YGR217W GLN1P32288 370 aaKnown RBP2.85□□□□□ -1.95
CCH1YGR217W YMR196WQ04336 1088 aa2.84□□□□□ -1.95
CCH1YGR217W PTP3P40048 928 aa2.84□□□□□ -1.96
CCH1YGR217W YIL177CP40434 1758 aa2.84□□□□□ -1.96
CCH1YGR217W YJL225CP40889 1758 aa2.84□□□□□ -1.96
CCH1YGR217W YRF1-3P0CX14 1859 aa2.83□□□□□ -1.96
CCH1YGR217W YRF1-7P0CX15 1859 aa2.83□□□□□ -1.96
CCH1YGR217W YRF1-6P53819 1859 aa2.83□□□□□ -1.96
CCH1YGR217W BNR1P40450 1375 aa2.82□□□□□ -1.96
CCH1YGR217W TEL1P38110 2787 aa2.82□□□□□ -1.96
CCH1YGR217W GEA1P47102 1408 aaPredicted RBP2.81□□□□□ -1.96
CCH1YGR217W URB1P34241 1764 aaKnown RBP2.79□□□□□ -1.96
CCH1YGR217W YAP3P38749 330 aa2.79□□□□□ -1.96
CCH1YGR217W YPR117WQ06116 2489 aa2.78□□□□□ -1.96
CCH1YGR217W MAK10Q02197 733 aa2.78□□□□□ -1.96
CCH1YGR217W YMR074CQ04773 145 aa2.77□□□□□ -1.97
CCH1YGR217W FKS3Q04952 1785 aa2.76□□□□□ -1.97
CCH1YGR217W SSA1P10591 642 aaKnown RBP2.75□□□□□ -1.97
CCH1YGR217W RSF2P46974 1380 aa2.75□□□□□ -1.97
CCH1YGR217W NUM1Q00402 2748 aa2.72□□□□□ -1.97
CCH1YGR217W RIM15P43565 1770 aa2.72□□□□□ -1.97
CCH1YGR217W FIG2P25653 1609 aa2.72□□□□□ -1.97
CCH1YGR217W PDR11P40550 1411 aa2.71□□□□□ -1.98
CCH1YGR217W YIL055CP40523 627 aaKnown RBP2.68□□□□□ -1.98
CCH1YGR217W TY4B-HP0C2J7 1802 aa2.67□□□□□ -1.98
CCH1YGR217W TY4B-JP47024 1803 aa2.67□□□□□ -1.98
CCH1YGR217W URN1Q06525 465 aaKnown RBP2.64□□□□□ -1.99
CCH1YGR217W SRB8P25648 1427 aa2.64□□□□□ -1.99
CCH1YGR217W TOR1P35169 2470 aa2.64□□□□□ -1.99
CCH1YGR217W APC1P53886 1748 aa2.62□□□□□ -1.99
CCH1YGR217W PRI1P10363 409 aa2.61□□□□□ -1.99
CCH1YGR217W ADE6P38972 1358 aaKnown RBP2.6□□□□□ -1.99
CCH1YGR217W IPL1P38991 367 aa2.59□□□□□ -1.99
CCH1YGR217W RPS9BP05755 195 aaKnown RBP2.59□□□□□ -1.99
CCH1YGR217W THI12P42883 340 aa2.59□□□□□ -1.99
CCH1YGR217W THI5P43534 340 aa2.59□□□□□ -1.99
CCH1YGR217W THI11P47183 340 aa2.59□□□□□ -1.99
CCH1YGR217W THI13Q07748 340 aa2.59□□□□□ -1.99
CCH1YGR217W UTP10P42945 1769 aaKnown RBP2.59□□□□□ -2
CCH1YGR217W PUS5Q06244 254 aa2.57□□□□□ -2
CCH1YGR217W BUD31P25337 157 aaPredicted RBP2.57□□□□□ -2
CCH1YGR217W MHP1P43638 1398 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms