RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W TY2B-OR2Q12501 1770 aa10.65□□□□□ -0.7
MSP1YGR028W TOP2P06786 1428 aaKnown RBP10.65□□□□□ -0.7
MSP1YGR028W PAN1P32521 1480 aa10.64□□□□□ -0.71
MSP1YGR028W YAP5P40574 245 aa10.63□□□□□ -0.71
MSP1YGR028W MET5P47169 1442 aa10.62□□□□□ -0.71
MSP1YGR028W ESC1Q03661 1658 aaKnown RBP10.61□□□□□ -0.71
MSP1YGR028W TY1B-BRQ12193 1756 aa10.6□□□□□ -0.71
MSP1YGR028W TY1B-GR3Q12316 1755 aa10.6□□□□□ -0.71
MSP1YGR028W TY1B-ORQ92393 1755 aa10.6□□□□□ -0.71
MSP1YGR028W YOR238WQ08634 303 aa10.59□□□□□ -0.71
MSP1YGR028W RKR1Q04781 1562 aa10.59□□□□□ -0.71
MSP1YGR028W POL1P13382 1468 aa10.57□□□□□ -0.72
MSP1YGR028W MMS22Q06164 1454 aa10.57□□□□□ -0.72
MSP1YGR028W MST1P07236 462 aa10.55□□□□□ -0.72
MSP1YGR028W VPS29P38759 282 aa10.55□□□□□ -0.72
MSP1YGR028W YMR1P47147 688 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
MSP1YGR028W STU1P38198 1513 aa10.53□□□□□ -0.72
MSP1YGR028W LTE1P07866 1435 aa10.52□□□□□ -0.73
MSP1YGR028W TY2B-BQ12491 1770 aa10.52□□□□□ -0.73
MSP1YGR028W TRM732Q03496 1420 aa10.51□□□□□ -0.73
MSP1YGR028W RPA190P10964 1664 aaKnown RBP10.51□□□□□ -0.73
MSP1YGR028W TY1B-DR3Q99231 1755 aa10.5□□□□□ -0.73
MSP1YGR028W RCR1P38212 213 aa10.5□□□□□ -0.73
MSP1YGR028W YOR1P53049 1477 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-HO13535 1793 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-DR5P0C2I2 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-DR6P0C2I3 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-LR2P0C2I5 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-LR3P0C2I6 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W TY1B-PR1P0C2I9 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W TY1B-PR2P0C2J0 1756 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-PR3P0C2J1 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W TY1B-JR1P47098 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-ML2Q03434 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W TY1B-ER1Q03612 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-ML1Q04711 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W TY1B-GR2Q12269 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-OLQ12273 1755 aa10.49□□□□□ -0.73
MSP1YGR028W TY1B-PLQ12414 1755 aaKnown RBP10.49□□□□□ -0.73
MSP1YGR028W SMC4Q12267 1418 aa10.48□□□□□ -0.73
MSP1YGR028W RAM2P29703 316 aa10.47□□□□□ -0.73
MSP1YGR028W SPP41P38904 1435 aa10.46□□□□□ -0.74
MSP1YGR028W DBP1P24784 617 aaKnown RBP10.44□□□□□ -0.74
MSP1YGR028W MAK11P20484 414 aaKnown RBP10.43□□□□□ -0.74
MSP1YGR028W DMA1P38823 416 aa10.42□□□□□ -0.74
MSP1YGR028W ITT1Q04638 464 aa10.42□□□□□ -0.74
MSP1YGR028W GEA2P39993 1459 aaKnown RBP10.41□□□□□ -0.74
MSP1YGR028W NUP159P40477 1460 aa10.41□□□□□ -0.74
MSP1YGR028W UBP9P39967 754 aa10.4□□□□□ -0.74
MSP1YGR028W STS1P38637 319 aa10.38□□□□□ -0.75
MSP1YGR028W TSC11P40061 1430 aa10.38□□□□□ -0.75
MSP1YGR028W MIF2P35201 549 aa10.37□□□□□ -0.75
MSP1YGR028W BNI1P41832 1953 aa10.36□□□□□ -0.75
MSP1YGR028W GTT3P39996 337 aa10.36□□□□□ -0.75
MSP1YGR028W VTH1P40438 1549 aa10.35□□□□□ -0.75
MSP1YGR028W VTH2P40890 1549 aa10.35□□□□□ -0.75
MSP1YGR028W YFR006WP43590 535 aa10.35□□□□□ -0.75
MSP1YGR028W VPS15P22219 1454 aa10.34□□□□□ -0.75
MSP1YGR028W PIB1Q06651 286 aa10.33□□□□□ -0.76
MSP1YGR028W MMS1Q06211 1407 aa10.3□□□□□ -0.76
MSP1YGR028W YRF1-1P0CX20 1796 aa10.29□□□□□ -0.76
MSP1YGR028W YRF1-5P0CX21 1796 aa10.29□□□□□ -0.76
MSP1YGR028W YRF1-8P0CX22 1796 aa10.29□□□□□ -0.76
MSP1YGR028W DRS2P39524 1355 aa10.29□□□□□ -0.76
MSP1YGR028W NTE1Q04958 1679 aa10.28□□□□□ -0.76
MSP1YGR028W ABP1P15891 592 aaKnown RBP10.28□□□□□ -0.76
MSP1YGR028W NOP53Q12080 455 aaKnown RBP10.28□□□□□ -0.76
MSP1YGR028W TY1B-JR2P47100 1755 aaKnown RBP10.28□□□□□ -0.76
MSP1YGR028W TY1B-ER2Q03619 1755 aa10.28□□□□□ -0.76
MSP1YGR028W TY1B-MR1Q04214 1755 aa10.28□□□□□ -0.76
MSP1YGR028W TY1B-MR2Q04670 1755 aaKnown RBP10.28□□□□□ -0.76
MSP1YGR028W TY1B-LR1Q12088 1755 aaKnown RBP10.28□□□□□ -0.76
MSP1YGR028W TY1B-NL1Q12112 1755 aa10.28□□□□□ -0.76
MSP1YGR028W TY1B-GR1Q12141 1755 aa10.28□□□□□ -0.76
MSP1YGR028W TY1B-BLQ12490 1755 aa10.28□□□□□ -0.76
MSP1YGR028W VMA1P17255 1071 aaKnown RBP10.27□□□□□ -0.77
MSP1YGR028W MYO4P32492 1471 aa10.27□□□□□ -0.77
MSP1YGR028W YTA7P40340 1379 aa10.25□□□□□ -0.77
MSP1YGR028W COQ8P27697 501 aa10.24□□□□□ -0.77
MSP1YGR028W SAM3Q08986 587 aa10.23□□□□□ -0.77
MSP1YGR028W RPO21P04050 1733 aaKnown RBP10.22□□□□□ -0.77
MSP1YGR028W SET1P38827 1080 aaKnown RBP10.22□□□□□ -0.77
MSP1YGR028W SNQ2P32568 1501 aaKnown RBP10.21□□□□□ -0.78
MSP1YGR028W SNT2P53127 1403 aa10.19□□□□□ -0.78
MSP1YGR028W SIS1P25294 352 aaKnown RBP10.19□□□□□ -0.78
MSP1YGR028W MSB4Q12317 492 aa10.19□□□□□ -0.78
MSP1YGR028W IFH1P39520 1085 aa10.17□□□□□ -0.78
MSP1YGR028W MET10P39692 1035 aa10.16□□□□□ -0.78
MSP1YGR028W VNX1P42839 908 aa10.16□□□□□ -0.78
MSP1YGR028W WSC3Q12215 556 aa10.16□□□□□ -0.78
MSP1YGR028W YBL029C-AQ3E756 94 aa10.16□□□□□ -0.78
MSP1YGR028W STH1P32597 1359 aa10.15□□□□□ -0.78
MSP1YGR028W EDS1P38073 919 aa10.15□□□□□ -0.78
MSP1YGR028W RTT106P40161 455 aa10.15□□□□□ -0.78
MSP1YGR028W PTC3P34221 468 aaKnown RBP10.14□□□□□ -0.79
MSP1YGR028W YOL036WQ08206 761 aa10.13□□□□□ -0.79
MSP1YGR028W EAP1P36041 632 aaKnown RBP10.12□□□□□ -0.79
MSP1YGR028W GYP5Q12344 894 aa10.12□□□□□ -0.79
MSP1YGR028W NUP170P38181 1502 aa10.12□□□□□ -0.79
MSP1YGR028W GRE2Q12068 342 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms