RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W BDF1P35817 686 aa5.74□□□□□ -1.49
PTR3YFR029W BRL1P38770 471 aa5.74□□□□□ -1.49
PTR3YFR029W LAM6Q08001 693 aa5.74□□□□□ -1.49
PTR3YFR029W PAM1P37304 830 aaKnown RBP5.73□□□□□ -1.49
PTR3YFR029W EPS1P40557 701 aa5.73□□□□□ -1.49
PTR3YFR029W HGH1P48362 394 aaKnown RBP5.72□□□□□ -1.49
PTR3YFR029W NOP7P53261 605 aaKnown RBP5.72□□□□□ -1.49
PTR3YFR029W VNX1P42839 908 aa5.72□□□□□ -1.49
PTR3YFR029W SWE1P32944 819 aa5.71□□□□□ -1.5
PTR3YFR029W BBC1P47068 1157 aa5.71□□□□□ -1.5
PTR3YFR029W TFB3Q03290 321 aa5.71□□□□□ -1.5
PTR3YFR029W YOR238WQ08634 303 aa5.71□□□□□ -1.5
PTR3YFR029W COQ8P27697 501 aa5.7□□□□□ -1.5
PTR3YFR029W RTG3P38165 486 aa5.7□□□□□ -1.5
PTR3YFR029W MAK21Q12176 1025 aaKnown RBP5.7□□□□□ -1.5
PTR3YFR029W REF2P42073 533 aaPredicted RBP5.69□□□□□ -1.5
PTR3YFR029W PKC1P24583 1151 aa5.68□□□□□ -1.5
PTR3YFR029W GLN1P32288 370 aaKnown RBP5.68□□□□□ -1.5
PTR3YFR029W NOP53Q12080 455 aaKnown RBP5.68□□□□□ -1.5
PTR3YFR029W SPC42P36094 363 aa5.67□□□□□ -1.5
PTR3YFR029W VPS29P38759 282 aa5.67□□□□□ -1.5
PTR3YFR029W FAR11P53917 953 aa5.67□□□□□ -1.5
PTR3YFR029W COX6P00427 148 aa5.65□□□□□ -1.5
PTR3YFR029W NUG1P40010 520 aaKnown RBP5.65□□□□□ -1.5
PTR3YFR029W EDS1P38073 919 aa5.65□□□□□ -1.51
PTR3YFR029W MET10P39692 1035 aa5.65□□□□□ -1.51
PTR3YFR029W YTA7P40340 1379 aa5.65□□□□□ -1.51
PTR3YFR029W RRN6P32786 894 aa5.64□□□□□ -1.51
PTR3YFR029W BRN1P38170 754 aa5.64□□□□□ -1.51
PTR3YFR029W NSR1P27476 414 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
PTR3YFR029W SPP1Q03012 353 aa5.64□□□□□ -1.51
PTR3YFR029W AIR2Q12476 344 aaKnown RBP5.64□□□□□ -1.51
PTR3YFR029W BIM1P40013 344 aa5.62□□□□□ -1.51
PTR3YFR029W SEN54Q02825 467 aaPredicted RBP5.62□□□□□ -1.51
PTR3YFR029W OCA5P38738 679 aa5.61□□□□□ -1.51
PTR3YFR029W ATG32P40458 529 aa5.61□□□□□ -1.51
PTR3YFR029W ATF2P53296 535 aa5.6□□□□□ -1.51
PTR3YFR029W YJR008WP47085 338 aa5.6□□□□□ -1.51
PTR3YFR029W TPO2P53283 614 aa5.59□□□□□ -1.51
PTR3YFR029W DOS2P54858 310 aa5.59□□□□□ -1.51
PTR3YFR029W YDR090CQ03193 310 aa5.59□□□□□ -1.51
PTR3YFR029W WSC3Q12215 556 aa5.59□□□□□ -1.51
PTR3YFR029W FKH1P40466 484 aa5.58□□□□□ -1.52
PTR3YFR029W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
PTR3YFR029W SSF1P38789 453 aaPredicted RBP5.57□□□□□ -1.52
PTR3YFR029W KTR1P27810 393 aaKnown RBP5.57□□□□□ -1.52
PTR3YFR029W STS1P38637 319 aa5.57□□□□□ -1.52
PTR3YFR029W YAP5P40574 245 aa5.57□□□□□ -1.52
PTR3YFR029W YJL171CP46992 396 aa5.57□□□□□ -1.52
PTR3YFR029W RTS3P53289 263 aa5.57□□□□□ -1.52
PTR3YFR029W MDG1P53885 366 aa5.57□□□□□ -1.52
PTR3YFR029W NOB1Q08444 459 aaKnown RBP5.56□□□□□ -1.52
PTR3YFR029W ERG12P07277 443 aa5.55□□□□□ -1.52
PTR3YFR029W YJL007CP47080 104 aa5.55□□□□□ -1.52
PTR3YFR029W SSA4P22202 642 aaKnown RBP5.55□□□□□ -1.52
PTR3YFR029W TIF11P38912 153 aaKnown RBP5.55□□□□□ -1.52
PTR3YFR029W TIF1P10081 395 aaKnown RBP5.54□□□□□ -1.52
PTR3YFR029W SLD2P34252 453 aa5.54□□□□□ -1.52
PTR3YFR029W UBP14P38237 781 aaKnown RBP5.54□□□□□ -1.52
PTR3YFR029W ALD4P46367 519 aaKnown RBP5.54□□□□□ -1.52
PTR3YFR029W SSA2P10592 639 aaKnown RBP5.53□□□□□ -1.52
PTR3YFR029W CSN12P47130 423 aa5.53□□□□□ -1.52
PTR3YFR029W GIN4Q12263 1142 aa5.53□□□□□ -1.52
PTR3YFR029W TTI1P36097 1038 aa5.53□□□□□ -1.52
PTR3YFR029W MIF2P35201 549 aa5.52□□□□□ -1.53
PTR3YFR029W BUD21Q08492 214 aaPredicted RBP5.52□□□□□ -1.53
PTR3YFR029W CPS1P27614 576 aa5.52□□□□□ -1.53
PTR3YFR029W HEM3P28789 327 aa5.52□□□□□ -1.53
PTR3YFR029W PTC3P34221 468 aaKnown RBP5.51□□□□□ -1.53
PTR3YFR029W BIO2P32451 375 aa5.5□□□□□ -1.53
PTR3YFR029W YMR1P47147 688 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
PTR3YFR029W ASF1P32447 279 aa5.49□□□□□ -1.53
PTR3YFR029W SUB1P54000 292 aaKnown RBP5.49□□□□□ -1.53
PTR3YFR029W PSE1P32337 1089 aaKnown RBP5.48□□□□□ -1.53
PTR3YFR029W CDC3P32457 520 aaKnown RBP5.48□□□□□ -1.53
PTR3YFR029W ALD2P47771 506 aa5.48□□□□□ -1.53
PTR3YFR029W VPS72Q03388 795 aa5.48□□□□□ -1.53
PTR3YFR029W YLR326WQ06170 240 aaKnown RBP5.48□□□□□ -1.53
PTR3YFR029W KRI1P42846 591 aaKnown RBP5.48□□□□□ -1.53
PTR3YFR029W CST6P40535 587 aa5.47□□□□□ -1.53
PTR3YFR029W OSW7P43611 510 aa5.47□□□□□ -1.53
PTR3YFR029W YAF9P53930 226 aa5.47□□□□□ -1.53
PTR3YFR029W UBX5Q06682 500 aa5.47□□□□□ -1.53
PTR3YFR029W PDR1P12383 1068 aa5.47□□□□□ -1.53
PTR3YFR029W IPL1P38991 367 aa5.47□□□□□ -1.53
PTR3YFR029W VHR2P40041 505 aa5.47□□□□□ -1.53
PTR3YFR029W YML083CQ04526 418 aa5.47□□□□□ -1.53
PTR3YFR029W LDB19Q12502 818 aa5.47□□□□□ -1.53
PTR3YFR029W PUP1P25043 261 aa5.46□□□□□ -1.54
PTR3YFR029W IOC2Q12072 812 aa5.46□□□□□ -1.54
PTR3YFR029W HAT1Q12341 374 aa5.46□□□□□ -1.54
PTR3YFR029W DBP1P24784 617 aaKnown RBP5.45□□□□□ -1.54
PTR3YFR029W BMT6Q12291 365 aa5.45□□□□□ -1.54
PTR3YFR029W GTT3P39996 337 aa5.44□□□□□ -1.54
PTR3YFR029W YFR006WP43590 535 aa5.44□□□□□ -1.54
PTR3YFR029W RPL34AP87262 121 aaPredicted RBP5.44□□□□□ -1.54
PTR3YFR029W TYW1Q08960 810 aaKnown RBP5.44□□□□□ -1.54
PTR3YFR029W SUP45P12385 437 aaKnown RBP5.43□□□□□ -1.54
PTR3YFR029W YFR016CP43597 1233 aaKnown RBP5.43□□□□□ -1.54
PTR3YFR029W ULI1P43604 169 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms