RNA–Protein interactions for RNA: YER035W

EDC2, Transcript of RNA-binding protein that directly activates mRNA decapping, yeastyeast

Gene EDC2, Length 438 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EDC2YER035W TY1B-LR1Q12088 1755 aaKnown RBP13.14□□□□□ -0.31
EDC2YER035W TY1B-NL1Q12112 1755 aa13.14□□□□□ -0.31
EDC2YER035W TY1B-GR1Q12141 1755 aa13.14□□□□□ -0.31
EDC2YER035W TY1B-BLQ12490 1755 aa13.14□□□□□ -0.31
EDC2YER035W POL1P13382 1468 aa13.12□□□□□ -0.31
EDC2YER035W RPO21P04050 1733 aaKnown RBP13.1□□□□□ -0.31
EDC2YER035W VTH1P40438 1549 aa13.09□□□□□ -0.31
EDC2YER035W VTH2P40890 1549 aa13.09□□□□□ -0.31
EDC2YER035W YOR1P53049 1477 aa13.09□□□□□ -0.31
EDC2YER035W SMC4Q12267 1418 aa13.08□□□□□ -0.32
EDC2YER035W STU1P38198 1513 aa13.08□□□□□ -0.32
EDC2YER035W NUP170P38181 1502 aa13.06□□□□□ -0.32
EDC2YER035W TSC11P40061 1430 aa13.05□□□□□ -0.32
EDC2YER035W DOP1Q03921 1698 aa12.97□□□□□ -0.33
EDC2YER035W SPO14P36126 1683 aa12.96□□□□□ -0.34
EDC2YER035W YOR093CQ12275 1648 aa12.95□□□□□ -0.34
EDC2YER035W ULS1Q08562 1619 aa12.95□□□□□ -0.34
EDC2YER035W MYO4P32492 1471 aa12.91□□□□□ -0.34
EDC2YER035W SNQ2P32568 1501 aaKnown RBP12.85□□□□□ -0.35
EDC2YER035W SNT2P53127 1403 aa12.84□□□□□ -0.35
EDC2YER035W MET10P39692 1035 aa12.79□□□□□ -0.36
EDC2YER035W PDR10P51533 1564 aa12.74□□□□□ -0.37
EDC2YER035W RTT106P40161 455 aa12.74□□□□□ -0.37
EDC2YER035W TRM3Q07527 1436 aa12.71□□□□□ -0.38
EDC2YER035W IQG1Q12280 1495 aa12.7□□□□□ -0.38
EDC2YER035W STH1P32597 1359 aa12.67□□□□□ -0.38
EDC2YER035W PDR12Q02785 1511 aa12.66□□□□□ -0.38
EDC2YER035W GDB1Q06625 1536 aa12.66□□□□□ -0.38
EDC2YER035W NUP157P40064 1391 aaKnown RBP12.64□□□□□ -0.39
EDC2YER035W YTA7P40340 1379 aa12.62□□□□□ -0.39
EDC2YER035W MLP2P40457 1679 aa12.61□□□□□ -0.39
EDC2YER035W PDR15Q04182 1529 aaKnown RBP12.59□□□□□ -0.39
EDC2YER035W CHC1P22137 1653 aaKnown RBP12.57□□□□□ -0.4
EDC2YER035W DNF3Q12674 1656 aa12.57□□□□□ -0.4
EDC2YER035W BUD3P25558 1636 aa12.55□□□□□ -0.4
EDC2YER035W ARO1P08566 1588 aaKnown RBP12.52□□□□□ -0.4
EDC2YER035W BFR2Q06631 534 aaKnown RBP12.41□□□□□ -0.42
EDC2YER035W SAS10Q12136 610 aaPredicted RBP12.33□□□□□ -0.44
EDC2YER035W USO1P25386 1790 aa12.33□□□□□ -0.44
EDC2YER035W YAP3P38749 330 aa12.31□□□□□ -0.44
EDC2YER035W IFH1P39520 1085 aa12.3□□□□□ -0.44
EDC2YER035W TY3B-GQ99315 1547 aa12.29□□□□□ -0.44
EDC2YER035W MAK10Q02197 733 aa12.29□□□□□ -0.44
EDC2YER035W YSP2Q06681 1438 aa12.28□□□□□ -0.44
EDC2YER035W BNR1P40450 1375 aa12.26□□□□□ -0.45
EDC2YER035W CKB1P43639 278 aa12.2□□□□□ -0.46
EDC2YER035W SEC7P11075 2009 aaKnown RBP12.18□□□□□ -0.46
EDC2YER035W YBT1P32386 1661 aa12.16□□□□□ -0.46
EDC2YER035W TFA1P36100 482 aa12.15□□□□□ -0.46
EDC2YER035W CAT8P39113 1433 aa12.13□□□□□ -0.47
EDC2YER035W THI12P42883 340 aa12.09□□□□□ -0.47
EDC2YER035W THI5P43534 340 aa12.09□□□□□ -0.47
EDC2YER035W THI11P47183 340 aa12.09□□□□□ -0.47
EDC2YER035W THI13Q07748 340 aa12.09□□□□□ -0.47
EDC2YER035W TAF7Q05021 590 aa12.08□□□□□ -0.48
EDC2YER035W URN1Q06525 465 aaKnown RBP12.07□□□□□ -0.48
EDC2YER035W GEA1P47102 1408 aaPredicted RBP12.06□□□□□ -0.48
EDC2YER035W IML1P47170 1584 aa12.05□□□□□ -0.48
EDC2YER035W NUP188P52593 1655 aaKnown RBP11.99□□□□□ -0.49
EDC2YER035W YMR196WQ04336 1088 aa11.98□□□□□ -0.49
EDC2YER035W TY1B-NL2Q99337 1749 aaKnown RBP11.97□□□□□ -0.49
EDC2YER035W HAP1P0CE41 1502 aa11.94□□□□□ -0.5
EDC2YER035W GLN1P32288 370 aaKnown RBP11.91□□□□□ -0.5
EDC2YER035W VMR1P38735 1592 aa11.9□□□□□ -0.5
EDC2YER035W IPL1P38991 367 aa11.89□□□□□ -0.51
EDC2YER035W TYS1P36421 394 aaKnown RBP11.86□□□□□ -0.51
EDC2YER035W APP1P53933 587 aa11.82□□□□□ -0.52
EDC2YER035W SRB8P25648 1427 aa11.81□□□□□ -0.52
EDC2YER035W YAH1Q12184 172 aaKnown RBP11.8□□□□□ -0.52
EDC2YER035W YIL055CP40523 627 aaKnown RBP11.78□□□□□ -0.52
EDC2YER035W BUD21Q08492 214 aaPredicted RBP11.77□□□□□ -0.53
EDC2YER035W PDR5P33302 1511 aaKnown RBP11.74□□□□□ -0.53
EDC2YER035W PRI1P10363 409 aa11.69□□□□□ -0.54
EDC2YER035W KRE5P22023 1365 aa11.64□□□□□ -0.55
EDC2YER035W AVT3P36062 692 aa11.63□□□□□ -0.55
EDC2YER035W PTP3P40048 928 aa11.61□□□□□ -0.55
EDC2YER035W RIA1P53893 1110 aa11.61□□□□□ -0.55
EDC2YER035W DIP2Q12220 943 aaPredicted RBP11.61□□□□□ -0.55
EDC2YER035W BCK1Q01389 1478 aa11.59□□□□□ -0.55
EDC2YER035W REB1P21538 810 aa11.59□□□□□ -0.55
EDC2YER035W YMR074CQ04773 145 aa11.59□□□□□ -0.55
EDC2YER035W PDR11P40550 1411 aa11.59□□□□□ -0.55
EDC2YER035W MRX12P47084 519 aa11.57□□□□□ -0.56
EDC2YER035W ENT1Q12518 454 aa11.52□□□□□ -0.57
EDC2YER035W YNR029CP53729 429 aaKnown RBP11.5□□□□□ -0.57
EDC2YER035W CFT1Q06632 1357 aaKnown RBP11.49□□□□□ -0.57
EDC2YER035W BUD31P25337 157 aaPredicted RBP11.48□□□□□ -0.57
EDC2YER035W ENV9Q08651 330 aa11.48□□□□□ -0.57
EDC2YER035W IMH1Q06704 911 aaKnown RBP11.46□□□□□ -0.57
EDC2YER035W GCN2P15442 1659 aa11.45□□□□□ -0.58
EDC2YER035W YRF1-2P40105 1681 aa11.44□□□□□ -0.58
EDC2YER035W TY3B-IQ7LHG5 1498 aaKnown RBP11.38□□□□□ -0.59
EDC2YER035W NUP192P47054 1683 aa11.36□□□□□ -0.59
EDC2YER035W CAB1Q04430 367 aa11.34□□□□□ -0.59
EDC2YER035W RRP5Q05022 1729 aaKnown RBP11.33□□□□□ -0.6
EDC2YER035W LEU3P08638 886 aa11.33□□□□□ -0.6
EDC2YER035W UBP1P25037 809 aa11.3□□□□□ -0.6
EDC2YER035W RAD9P14737 1309 aa11.28□□□□□ -0.6
EDC2YER035W PRP45P28004 379 aaPredicted RBP11.26□□□□□ -0.61
EDC2YER035W YBL086CP38177 466 aa11.25□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms