RNA–Protein interactions for RNA: YEL015W

EDC3, Transcript of Non-essential conserved protein with a role in mRNA decapping, yeastyeast

Gene EDC3, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EDC3YEL015W SSM4P40318 1319 aa8.39□□□□□ -1.07
EDC3YEL015W LEU3P08638 886 aa8.38□□□□□ -1.07
EDC3YEL015W RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
EDC3YEL015W IOC4Q04213 475 aa8.38□□□□□ -1.07
EDC3YEL015W RLP24Q07915 199 aaKnown RBP8.37□□□□□ -1.07
EDC3YEL015W PDR10P51533 1564 aa8.37□□□□□ -1.07
EDC3YEL015W NOT3P06102 836 aaKnown RBP8.37□□□□□ -1.07
EDC3YEL015W MYO4P32492 1471 aa8.36□□□□□ -1.07
EDC3YEL015W NNF2P53253 936 aa8.35□□□□□ -1.07
EDC3YEL015W SMC4Q12267 1418 aa8.35□□□□□ -1.07
EDC3YEL015W NUP170P38181 1502 aa8.34□□□□□ -1.07
EDC3YEL015W EDE1P34216 1381 aa8.34□□□□□ -1.07
EDC3YEL015W ABP1P15891 592 aaKnown RBP8.34□□□□□ -1.07
EDC3YEL015W YPP1P46951 817 aa8.34□□□□□ -1.07
EDC3YEL015W PRP3Q03338 469 aaPredicted RBP8.34□□□□□ -1.08
EDC3YEL015W YPK9Q12697 1472 aa8.33□□□□□ -1.08
EDC3YEL015W BYE1P36106 594 aa8.33□□□□□ -1.08
EDC3YEL015W THO2P53552 1597 aaKnown RBP8.32□□□□□ -1.08
EDC3YEL015W SIC1P38634 284 aa8.32□□□□□ -1.08
EDC3YEL015W DSN1P40568 576 aa8.32□□□□□ -1.08
EDC3YEL015W TAN1P53072 289 aaPredicted RBP8.32□□□□□ -1.08
EDC3YEL015W ETT1Q08421 412 aaKnown RBP8.32□□□□□ -1.08
EDC3YEL015W MSH3P25336 1018 aa8.31□□□□□ -1.08
EDC3YEL015W LTV1P34078 463 aa8.31□□□□□ -1.08
EDC3YEL015W DOS2P54858 310 aa8.31□□□□□ -1.08
EDC3YEL015W MYO2P19524 1574 aaKnown RBP8.31□□□□□ -1.08
EDC3YEL015W SWE1P32944 819 aa8.3□□□□□ -1.08
EDC3YEL015W NST1P53935 1240 aa8.3□□□□□ -1.08
EDC3YEL015W CHZ1P40019 153 aaPredicted RBP8.3□□□□□ -1.08
EDC3YEL015W PSD2P53037 1138 aaKnown RBP8.3□□□□□ -1.08
EDC3YEL015W CBF5P33322 483 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
EDC3YEL015W IRC20Q06554 1556 aa8.29□□□□□ -1.08
EDC3YEL015W RPS0AP32905 252 aaKnown RBP8.28□□□□□ -1.08
EDC3YEL015W GRX3Q03835 250 aa8.28□□□□□ -1.08
EDC3YEL015W IFH1P39520 1085 aa8.27□□□□□ -1.08
EDC3YEL015W DJP1P40564 432 aa8.27□□□□□ -1.08
EDC3YEL015W CLB5P30283 435 aa8.26□□□□□ -1.09
EDC3YEL015W YSH1Q06224 779 aaPredicted RBP8.26□□□□□ -1.09
EDC3YEL015W PCT1P13259 424 aa8.25□□□□□ -1.09
EDC3YEL015W VPS24P36095 224 aaKnown RBP8.25□□□□□ -1.09
EDC3YEL015W NOP8Q08287 484 aaPredicted RBP8.25□□□□□ -1.09
EDC3YEL015W SRP54P20424 541 aaKnown RBP8.24□□□□□ -1.09
EDC3YEL015W MSP1P28737 362 aa8.24□□□□□ -1.09
EDC3YEL015W HAA1Q12753 694 aaKnown RBP8.24□□□□□ -1.09
EDC3YEL015W RPN7Q06103 429 aaKnown RBP8.24□□□□□ -1.09
EDC3YEL015W STU1P38198 1513 aa8.23□□□□□ -1.09
EDC3YEL015W ARL1P38116 183 aaKnown RBP8.22□□□□□ -1.09
EDC3YEL015W TPM2P40414 161 aa8.22□□□□□ -1.09
EDC3YEL015W ECM16Q04217 1267 aaKnown RBP8.22□□□□□ -1.09
EDC3YEL015W TAF2P23255 1407 aa8.21□□□□□ -1.09
EDC3YEL015W MED8P38304 223 aa8.21□□□□□ -1.09
EDC3YEL015W SNU71P53207 620 aaKnown RBP8.21□□□□□ -1.09
EDC3YEL015W SPT6P23615 1451 aaKnown RBP8.21□□□□□ -1.09
EDC3YEL015W PAN1P32521 1480 aa8.21□□□□□ -1.09
EDC3YEL015W TCD1P38756 429 aa8.21□□□□□ -1.1
EDC3YEL015W BMS1Q08965 1183 aaKnown RBP8.21□□□□□ -1.1
EDC3YEL015W MLP2P40457 1679 aa8.2□□□□□ -1.1
EDC3YEL015W KNS1P32350 737 aaPredicted RBP8.2□□□□□ -1.1
EDC3YEL015W ECM1P39715 212 aa8.2□□□□□ -1.1
EDC3YEL015W PET111P08468 800 aa8.19□□□□□ -1.1
EDC3YEL015W SWI3P32591 825 aa8.19□□□□□ -1.1
EDC3YEL015W VPS60Q03390 229 aa8.19□□□□□ -1.1
EDC3YEL015W MHP1P43638 1398 aa8.19□□□□□ -1.1
EDC3YEL015W CIN4P39110 191 aa8.18□□□□□ -1.1
EDC3YEL015W TOP1P04786 769 aa8.18□□□□□ -1.1
EDC3YEL015W CLB1P24868 471 aa8.18□□□□□ -1.1
EDC3YEL015W DEP1P31385 405 aa8.18□□□□□ -1.1
EDC3YEL015W TIF4632P39936 914 aaKnown RBP8.18□□□□□ -1.1
EDC3YEL015W RNT1Q02555 471 aa8.18□□□□□ -1.1
EDC3YEL015W SAP190P36123 1033 aa8.17□□□□□ -1.1
EDC3YEL015W RAD2P07276 1031 aa8.16□□□□□ -1.1
EDC3YEL015W ESC2Q06340 456 aa8.16□□□□□ -1.1
EDC3YEL015W TLG1Q03322 224 aa8.15□□□□□ -1.1
EDC3YEL015W TRM3Q07527 1436 aa8.15□□□□□ -1.1
EDC3YEL015W NOP14Q99207 810 aaKnown RBP8.15□□□□□ -1.1
EDC3YEL015W MDG1P53885 366 aa8.14□□□□□ -1.11
EDC3YEL015W RRP15Q06511 250 aaPredicted RBP8.14□□□□□ -1.11
EDC3YEL015W LSP1Q12230 341 aaKnown RBP8.14□□□□□ -1.11
EDC3YEL015W RAD51P25454 400 aa8.14□□□□□ -1.11
EDC3YEL015W KIP3P53086 805 aaKnown RBP8.14□□□□□ -1.11
EDC3YEL015W VPS72Q03388 795 aa8.14□□□□□ -1.11
EDC3YEL015W TSR3Q12094 313 aaKnown RBP8.14□□□□□ -1.11
EDC3YEL015W DNA2P38859 1522 aa8.13□□□□□ -1.11
EDC3YEL015W RAD9P14737 1309 aa8.12□□□□□ -1.11
EDC3YEL015W RRP14P36080 434 aaKnown RBP8.12□□□□□ -1.11
EDC3YEL015W CDC45Q08032 650 aa8.12□□□□□ -1.11
EDC3YEL015W YVC1Q12324 675 aa8.12□□□□□ -1.11
EDC3YEL015W HIF1Q12373 385 aa8.12□□□□□ -1.11
EDC3YEL015W SCC2Q04002 1493 aa8.12□□□□□ -1.11
EDC3YEL015W PAP2P53632 584 aaKnown RBP8.11□□□□□ -1.11
EDC3YEL015W HOS3Q02959 697 aaKnown RBP8.11□□□□□ -1.11
EDC3YEL015W ERV41Q04651 352 aa8.11□□□□□ -1.11
EDC3YEL015W APL5Q08951 932 aaKnown RBP8.11□□□□□ -1.11
EDC3YEL015W RSC1P53236 928 aa8.1□□□□□ -1.11
EDC3YEL015W VPS30Q02948 557 aa8.1□□□□□ -1.11
EDC3YEL015W GEA1P47102 1408 aaPredicted RBP8.1□□□□□ -1.11
EDC3YEL015W RPP0P05317 312 aaKnown RBP8.09□□□□□ -1.11
EDC3YEL015W TEA1P47988 759 aa8.09□□□□□ -1.11
EDC3YEL015W NHA1Q99271 985 aa8.09□□□□□ -1.11
EDC3YEL015W REV3P14284 1504 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms