RNA–Protein interactions for RNA: YDR418W

RPL12B, Transcript of Ribosomal 60S subunit protein L12B, yeast

Gene RPL12B, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL12B	YDR418W	TY1B-LR1	Q12088	1755 aa	Known RBP	13.48	□□□□□ -0.25
RPL12B	YDR418W	TY1B-NL1	Q12112	1755 aa		13.48	□□□□□ -0.25
RPL12B	YDR418W	TY1B-GR1	Q12141	1755 aa		13.48	□□□□□ -0.25
RPL12B	YDR418W	TY1B-BL	Q12490	1755 aa		13.48	□□□□□ -0.25
RPL12B	YDR418W	RPO21	P04050	1733 aa	Known RBP	13.43	□□□□□ -0.26
RPL12B	YDR418W	SMC4	Q12267	1418 aa		13.41	□□□□□ -0.26
RPL12B	YDR418W	NUP170	P38181	1502 aa		13.41	□□□□□ -0.26
RPL12B	YDR418W	POL1	P13382	1468 aa		13.39	□□□□□ -0.27
RPL12B	YDR418W	TSC11	P40061	1430 aa		13.39	□□□□□ -0.27
RPL12B	YDR418W	VTH1	P40438	1549 aa		13.38	□□□□□ -0.27
RPL12B	YDR418W	VTH2	P40890	1549 aa		13.38	□□□□□ -0.27
RPL12B	YDR418W	YOR093C	Q12275	1648 aa		13.36	□□□□□ -0.27
RPL12B	YDR418W	YOR1	P53049	1477 aa		13.36	□□□□□ -0.27
RPL12B	YDR418W	STU1	P38198	1513 aa		13.31	□□□□□ -0.28
RPL12B	YDR418W	SPO14	P36126	1683 aa		13.28	□□□□□ -0.28
RPL12B	YDR418W	DOP1	Q03921	1698 aa		13.26	□□□□□ -0.29
RPL12B	YDR418W	ULS1	Q08562	1619 aa		13.25	□□□□□ -0.29
RPL12B	YDR418W	MYO4	P32492	1471 aa		13.24	□□□□□ -0.29
RPL12B	YDR418W	MET10	P39692	1035 aa		13.23	□□□□□ -0.29
RPL12B	YDR418W	SNT2	P53127	1403 aa		13.22	□□□□□ -0.29
RPL12B	YDR418W	SNQ2	P32568	1501 aa	Known RBP	13.13	□□□□□ -0.31
RPL12B	YDR418W	RTT106	P40161	455 aa		13.1	□□□□□ -0.31
RPL12B	YDR418W	TRM3	Q07527	1436 aa		13.1	□□□□□ -0.31
RPL12B	YDR418W	PDR10	P51533	1564 aa		13.09	□□□□□ -0.31
RPL12B	YDR418W	IQG1	Q12280	1495 aa		13.04	□□□□□ -0.32
RPL12B	YDR418W	STH1	P32597	1359 aa		13.04	□□□□□ -0.32
RPL12B	YDR418W	PDR12	Q02785	1511 aa		13.02	□□□□□ -0.33
RPL12B	YDR418W	YTA7	P40340	1379 aa		12.96	□□□□□ -0.33
RPL12B	YDR418W	GDB1	Q06625	1536 aa		12.96	□□□□□ -0.33
RPL12B	YDR418W	NUP157	P40064	1391 aa	Known RBP	12.95	□□□□□ -0.34
RPL12B	YDR418W	PDR15	Q04182	1529 aa	Known RBP	12.94	□□□□□ -0.34
RPL12B	YDR418W	BUD3	P25558	1636 aa		12.94	□□□□□ -0.34
RPL12B	YDR418W	DNF3	Q12674	1656 aa		12.92	□□□□□ -0.34
RPL12B	YDR418W	MLP2	P40457	1679 aa		12.89	□□□□□ -0.35
RPL12B	YDR418W	CHC1	P22137	1653 aa	Known RBP	12.86	□□□□□ -0.35
RPL12B	YDR418W	ARO1	P08566	1588 aa	Known RBP	12.84	□□□□□ -0.35
RPL12B	YDR418W	YAP3	P38749	330 aa		12.77	□□□□□ -0.37
RPL12B	YDR418W	MAK10	Q02197	733 aa		12.73	□□□□□ -0.37
RPL12B	YDR418W	USO1	P25386	1790 aa		12.69	□□□□□ -0.38
RPL12B	YDR418W	BNR1	P40450	1375 aa		12.69	□□□□□ -0.38
RPL12B	YDR418W	SEC7	P11075	2009 aa	Known RBP	12.67	□□□□□ -0.38
RPL12B	YDR418W	TY3B-G	Q99315	1547 aa		12.66	□□□□□ -0.38
RPL12B	YDR418W	YSP2	Q06681	1438 aa		12.57	□□□□□ -0.4
RPL12B	YDR418W	URN1	Q06525	465 aa	Known RBP	12.55	□□□□□ -0.4
RPL12B	YDR418W	SAS10	Q12136	610 aa	Predicted RBP	12.53	□□□□□ -0.4
RPL12B	YDR418W	IFH1	P39520	1085 aa		12.52	□□□□□ -0.41
RPL12B	YDR418W	CKB1	P43639	278 aa		12.48	□□□□□ -0.41
RPL12B	YDR418W	THI12	P42883	340 aa		12.47	□□□□□ -0.41
RPL12B	YDR418W	THI5	P43534	340 aa		12.47	□□□□□ -0.41
RPL12B	YDR418W	THI11	P47183	340 aa		12.47	□□□□□ -0.41
RPL12B	YDR418W	YMR196W	Q04336	1088 aa		12.47	□□□□□ -0.41
RPL12B	YDR418W	THI13	Q07748	340 aa		12.47	□□□□□ -0.41
RPL12B	YDR418W	TAF7	Q05021	590 aa		12.45	□□□□□ -0.42
RPL12B	YDR418W	CAT8	P39113	1433 aa		12.44	□□□□□ -0.42
RPL12B	YDR418W	GLN1	P32288	370 aa	Known RBP	12.4	□□□□□ -0.42
RPL12B	YDR418W	TY1B-NL2	Q99337	1749 aa	Known RBP	12.38	□□□□□ -0.43
RPL12B	YDR418W	YBT1	P32386	1661 aa		12.35	□□□□□ -0.43
RPL12B	YDR418W	IML1	P47170	1584 aa		12.3	□□□□□ -0.44
RPL12B	YDR418W	HAP1	P0CE41	1502 aa		12.29	□□□□□ -0.44
RPL12B	YDR418W	YAH1	Q12184	172 aa	Known RBP	12.29	□□□□□ -0.44
RPL12B	YDR418W	NUP188	P52593	1655 aa	Known RBP	12.29	□□□□□ -0.44
RPL12B	YDR418W	GEA1	P47102	1408 aa	Predicted RBP	12.28	□□□□□ -0.44
RPL12B	YDR418W	IPL1	P38991	367 aa		12.27	□□□□□ -0.45
RPL12B	YDR418W	YIL055C	P40523	627 aa	Known RBP	12.23	□□□□□ -0.45
RPL12B	YDR418W	PRI1	P10363	409 aa		12.21	□□□□□ -0.45
RPL12B	YDR418W	APP1	P53933	587 aa		12.2	□□□□□ -0.46
RPL12B	YDR418W	VMR1	P38735	1592 aa		12.19	□□□□□ -0.46
RPL12B	YDR418W	TYS1	P36421	394 aa	Known RBP	12.16	□□□□□ -0.46
RPL12B	YDR418W	SRB8	P25648	1427 aa		12.06	□□□□□ -0.48
RPL12B	YDR418W	BUD21	Q08492	214 aa	Predicted RBP	12.06	□□□□□ -0.48
RPL12B	YDR418W	YMR074C	Q04773	145 aa		12.05	□□□□□ -0.48
RPL12B	YDR418W	PTP3	P40048	928 aa		12.02	□□□□□ -0.49
RPL12B	YDR418W	PDR11	P40550	1411 aa		11.96	□□□□□ -0.49
RPL12B	YDR418W	PDR5	P33302	1511 aa	Known RBP	11.96	□□□□□ -0.5
RPL12B	YDR418W	BCK1	Q01389	1478 aa		11.95	□□□□□ -0.5
RPL12B	YDR418W	REB1	P21538	810 aa		11.94	□□□□□ -0.5
RPL12B	YDR418W	MRX12	P47084	519 aa		11.91	□□□□□ -0.5
RPL12B	YDR418W	RIA1	P53893	1110 aa		11.91	□□□□□ -0.5
RPL12B	YDR418W	ENT1	Q12518	454 aa		11.9	□□□□□ -0.5
RPL12B	YDR418W	KRE5	P22023	1365 aa		11.9	□□□□□ -0.5
RPL12B	YDR418W	BUD31	P25337	157 aa	Predicted RBP	11.88	□□□□□ -0.51
RPL12B	YDR418W	ENV9	Q08651	330 aa		11.86	□□□□□ -0.51
RPL12B	YDR418W	YNR029C	P53729	429 aa	Known RBP	11.84	□□□□□ -0.51
RPL12B	YDR418W	IMH1	Q06704	911 aa	Known RBP	11.84	□□□□□ -0.51
RPL12B	YDR418W	CFT1	Q06632	1357 aa	Known RBP	11.81	□□□□□ -0.52
RPL12B	YDR418W	YRF1-2	P40105	1681 aa		11.74	□□□□□ -0.53
RPL12B	YDR418W	UBP1	P25037	809 aa		11.73	□□□□□ -0.53
RPL12B	YDR418W	LEU3	P08638	886 aa		11.69	□□□□□ -0.54
RPL12B	YDR418W	SSA1	P10591	642 aa	Known RBP	11.69	□□□□□ -0.54
RPL12B	YDR418W	GCN2	P15442	1659 aa		11.68	□□□□□ -0.54
RPL12B	YDR418W	YBL086C	P38177	466 aa		11.65	□□□□□ -0.54
RPL12B	YDR418W	RRP5	Q05022	1729 aa	Known RBP	11.63	□□□□□ -0.55
RPL12B	YDR418W	RRD1	P40454	393 aa	Known RBP	11.63	□□□□□ -0.55
RPL12B	YDR418W	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.62	□□□□□ -0.55
RPL12B	YDR418W	UGA2	P38067	497 aa		11.61	□□□□□ -0.55
RPL12B	YDR418W	PRP45	P28004	379 aa	Predicted RBP	11.59	□□□□□ -0.55
RPL12B	YDR418W	CAB1	Q04430	367 aa		11.59	□□□□□ -0.55
RPL12B	YDR418W	NUP192	P47054	1683 aa		11.59	□□□□□ -0.55
RPL12B	YDR418W	RPN11	P43588	306 aa	Known RBP	11.57	□□□□□ -0.56
RPL12B	YDR418W	TAF5	P38129	798 aa		11.54	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms