RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W PSD2P53037 1138 aaKnown RBP4.42□□□□□ -1.7
SIZ1YDR409W SNQ2P32568 1501 aaKnown RBP4.42□□□□□ -1.7
SIZ1YDR409W RPG1P38249 964 aaKnown RBP4.42□□□□□ -1.7
SIZ1YDR409W SNU71P53207 620 aaKnown RBP4.42□□□□□ -1.7
SIZ1YDR409W MLP2P40457 1679 aa4.42□□□□□ -1.7
SIZ1YDR409W KIN1P13185 1064 aa4.41□□□□□ -1.7
SIZ1YDR409W SMC4Q12267 1418 aa4.41□□□□□ -1.7
SIZ1YDR409W SLX8P40072 274 aa4.41□□□□□ -1.7
SIZ1YDR409W SEN54Q02825 467 aaPredicted RBP4.41□□□□□ -1.7
SIZ1YDR409W FAR11P53917 953 aa4.4□□□□□ -1.71
SIZ1YDR409W MDS3P53094 1487 aa4.4□□□□□ -1.71
SIZ1YDR409W RPO31P04051 1460 aa4.39□□□□□ -1.71
SIZ1YDR409W TOP1P04786 769 aa4.39□□□□□ -1.71
SIZ1YDR409W NUP42P49686 430 aaKnown RBP4.39□□□□□ -1.71
SIZ1YDR409W YAH1Q12184 172 aaKnown RBP4.39□□□□□ -1.71
SIZ1YDR409W POL5P39985 1022 aaKnown RBP4.38□□□□□ -1.71
SIZ1YDR409W AIM44Q99299 758 aa4.38□□□□□ -1.71
SIZ1YDR409W GLN1P32288 370 aaKnown RBP4.38□□□□□ -1.71
SIZ1YDR409W YCF1P39109 1515 aaKnown RBP4.38□□□□□ -1.71
SIZ1YDR409W RCR1P38212 213 aa4.37□□□□□ -1.71
SIZ1YDR409W OCA5P38738 679 aa4.37□□□□□ -1.71
SIZ1YDR409W TPO2P53283 614 aa4.37□□□□□ -1.71
SIZ1YDR409W TOP2P06786 1428 aaKnown RBP4.37□□□□□ -1.71
SIZ1YDR409W YKR023WP36119 530 aaKnown RBP4.37□□□□□ -1.71
SIZ1YDR409W SEC3P33332 1336 aaKnown RBP4.37□□□□□ -1.71
SIZ1YDR409W PDR10P51533 1564 aa4.37□□□□□ -1.71
SIZ1YDR409W TY1B-DR3Q99231 1755 aa4.37□□□□□ -1.71
SIZ1YDR409W SPC42P36094 363 aa4.37□□□□□ -1.71
SIZ1YDR409W PDR15Q04182 1529 aaKnown RBP4.36□□□□□ -1.71
SIZ1YDR409W ULS1Q08562 1619 aa4.36□□□□□ -1.71
SIZ1YDR409W TSC11P40061 1430 aa4.36□□□□□ -1.71
SIZ1YDR409W GEA1P47102 1408 aaPredicted RBP4.36□□□□□ -1.71
SIZ1YDR409W GEF1P37020 779 aa4.36□□□□□ -1.71
SIZ1YDR409W SET1P38827 1080 aaKnown RBP4.36□□□□□ -1.71
SIZ1YDR409W PAN1P32521 1480 aa4.35□□□□□ -1.71
SIZ1YDR409W SPT7P35177 1332 aa4.35□□□□□ -1.71
SIZ1YDR409W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SIZ1YDR409W YNR021WP53723 404 aaKnown RBP4.35□□□□□ -1.71
SIZ1YDR409W ISW2Q08773 1120 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-LR1P0C2J3 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-FP0CX63 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-GR2P0CX64 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-CP25384 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-DR2Q03494 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY1B-DR1Q03855 1755 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-DR3Q07791 1770 aaKnown RBP4.35□□□□□ -1.71
SIZ1YDR409W TY2B-OR1Q12113 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-DR1Q12472 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY2B-OR2Q12501 1770 aa4.35□□□□□ -1.71
SIZ1YDR409W TY3B-GQ99315 1547 aa4.34□□□□□ -1.71
SIZ1YDR409W DIT2P21595 489 aa4.34□□□□□ -1.71
SIZ1YDR409W GLC3P32775 704 aa4.34□□□□□ -1.72
SIZ1YDR409W PKC1P24583 1151 aa4.33□□□□□ -1.72
SIZ1YDR409W AIM7Q12156 149 aa4.33□□□□□ -1.72
SIZ1YDR409W VPS70P47161 811 aa4.33□□□□□ -1.72
SIZ1YDR409W DOS2P54858 310 aa4.33□□□□□ -1.72
SIZ1YDR409W PRI1P10363 409 aa4.32□□□□□ -1.72
SIZ1YDR409W PRS1P32895 427 aaKnown RBP4.32□□□□□ -1.72
SIZ1YDR409W TY2B-BQ12491 1770 aa4.32□□□□□ -1.72
SIZ1YDR409W SSA1P10591 642 aaKnown RBP4.32□□□□□ -1.72
SIZ1YDR409W RRP15Q06511 250 aaPredicted RBP4.31□□□□□ -1.72
SIZ1YDR409W NOB1Q08444 459 aaKnown RBP4.31□□□□□ -1.72
SIZ1YDR409W RTT106P40161 455 aa4.3□□□□□ -1.72
SIZ1YDR409W SPB4P25808 606 aaPredicted RBP4.3□□□□□ -1.72
SIZ1YDR409W ESC1Q03661 1658 aaKnown RBP4.3□□□□□ -1.72
SIZ1YDR409W YLR419WQ06698 1435 aaKnown RBP4.3□□□□□ -1.72
SIZ1YDR409W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72 RIP-Chip
SIZ1YDR409W VPS15P22219 1454 aa4.29□□□□□ -1.72
SIZ1YDR409W SRB8P25648 1427 aa4.29□□□□□ -1.72
SIZ1YDR409W RRN6P32786 894 aa4.29□□□□□ -1.72
SIZ1YDR409W YBT1P32386 1661 aa4.28□□□□□ -1.72
SIZ1YDR409W PBS2P08018 668 aa4.28□□□□□ -1.72
SIZ1YDR409W TFB3Q03290 321 aa4.28□□□□□ -1.72
SIZ1YDR409W NUP159P40477 1460 aa4.28□□□□□ -1.72
SIZ1YDR409W RSM7P47150 247 aa4.28□□□□□ -1.72
SIZ1YDR409W HPC2Q01448 625 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-HO13535 1793 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-DR5P0C2I2 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-DR6P0C2I3 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-LR2P0C2I5 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-LR3P0C2I6 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W TY1B-PR1P0C2I9 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W TY1B-PR2P0C2J0 1756 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-PR3P0C2J1 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W TY1B-JR1P47098 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-ML2Q03434 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W TY1B-ER1Q03612 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-ML1Q04711 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W TY1B-GR2Q12269 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-OLQ12273 1755 aa4.27□□□□□ -1.73
SIZ1YDR409W TY1B-PLQ12414 1755 aaKnown RBP4.27□□□□□ -1.73
SIZ1YDR409W SSF1P38789 453 aaPredicted RBP4.27□□□□□ -1.73
SIZ1YDR409W MET5P47169 1442 aa4.27□□□□□ -1.73
SIZ1YDR409W DNF1P32660 1571 aa4.26□□□□□ -1.73
SIZ1YDR409W ATG32P40458 529 aa4.26□□□□□ -1.73
SIZ1YDR409W SNT2P53127 1403 aa4.26□□□□□ -1.73
SIZ1YDR409W PDR5P33302 1511 aaKnown RBP4.26□□□□□ -1.73
SIZ1YDR409W ERG12P07277 443 aa4.25□□□□□ -1.73
SIZ1YDR409W NUG1P40010 520 aaKnown RBP4.25□□□□□ -1.73
SIZ1YDR409W EBP2P36049 427 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms