RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W TY2B-FP0CX63 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-GR2P0CX64 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-CP25384 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-DR2Q03494 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY1B-DR1Q03855 1755 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-DR3Q07791 1770 aaKnown RBP9.3□□□□□ -0.92
TRR1YDR353W TY2B-OR1Q12113 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-DR1Q12472 1770 aa9.3□□□□□ -0.92
TRR1YDR353W TY2B-OR2Q12501 1770 aa9.3□□□□□ -0.92
TRR1YDR353W YPR148CQ06523 435 aa9.3□□□□□ -0.92
TRR1YDR353W TY1B-DR3Q99231 1755 aa9.28□□□□□ -0.92
TRR1YDR353W TOP2P06786 1428 aaKnown RBP9.28□□□□□ -0.92
TRR1YDR353W SMC4Q12267 1418 aa9.28□□□□□ -0.92
TRR1YDR353W YCF1P39109 1515 aaKnown RBP9.27□□□□□ -0.93
TRR1YDR353W UFD4P33202 1483 aa9.27□□□□□ -0.93
TRR1YDR353W TY2B-BQ12491 1770 aa9.23□□□□□ -0.93
TRR1YDR353W RTG3P38165 486 aa9.23□□□□□ -0.93
TRR1YDR353W TRM732Q03496 1420 aa9.21□□□□□ -0.94
TRR1YDR353W SNQ2P32568 1501 aaKnown RBP9.2□□□□□ -0.94
TRR1YDR353W MLP2P40457 1679 aa9.2□□□□□ -0.94
TRR1YDR353W YAP5P40574 245 aa9.18□□□□□ -0.94
TRR1YDR353W MNN4P36044 1178 aa9.17□□□□□ -0.94
TRR1YDR353W SAS10Q12136 610 aaPredicted RBP9.16□□□□□ -0.94
TRR1YDR353W NUP170P38181 1502 aa9.15□□□□□ -0.94
TRR1YDR353W SPP41P38904 1435 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-HO13535 1793 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-DR5P0C2I2 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-DR6P0C2I3 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-LR2P0C2I5 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-LR3P0C2I6 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W TY1B-PR1P0C2I9 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W TY1B-PR2P0C2J0 1756 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-PR3P0C2J1 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W TY1B-JR1P47098 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-ML2Q03434 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W TY1B-ER1Q03612 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-ML1Q04711 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W TY1B-GR2Q12269 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-OLQ12273 1755 aa9.15□□□□□ -0.94
TRR1YDR353W TY1B-PLQ12414 1755 aaKnown RBP9.15□□□□□ -0.94
TRR1YDR353W VPS29P38759 282 aa9.14□□□□□ -0.95
TRR1YDR353W TAF7Q05021 590 aa9.14□□□□□ -0.95
TRR1YDR353W MST1P07236 462 aa9.13□□□□□ -0.95
TRR1YDR353W RCR1P38212 213 aa9.13□□□□□ -0.95
TRR1YDR353W YOR238WQ08634 303 aa9.13□□□□□ -0.95
TRR1YDR353W TY1B-BRQ12193 1756 aa9.13□□□□□ -0.95
TRR1YDR353W TY1B-GR3Q12316 1755 aa9.13□□□□□ -0.95
TRR1YDR353W TY1B-ORQ92393 1755 aa9.13□□□□□ -0.95
TRR1YDR353W STH1P32597 1359 aa9.12□□□□□ -0.95
TRR1YDR353W IKI3Q06706 1349 aaKnown RBP9.12□□□□□ -0.95
TRR1YDR353W YMR1P47147 688 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
TRR1YDR353W TCB2P48231 1178 aa9.11□□□□□ -0.95
TRR1YDR353W PDR15Q04182 1529 aaKnown RBP9.1□□□□□ -0.95
TRR1YDR353W ULS1Q08562 1619 aa9.09□□□□□ -0.95
TRR1YDR353W RAM2P29703 316 aa9.08□□□□□ -0.96
TRR1YDR353W SEC3P33332 1336 aaKnown RBP9.07□□□□□ -0.96
TRR1YDR353W DBP1P24784 617 aaKnown RBP9.03□□□□□ -0.96
TRR1YDR353W GEA1P47102 1408 aaPredicted RBP9.02□□□□□ -0.97
TRR1YDR353W VTH1P40438 1549 aa9.01□□□□□ -0.97
TRR1YDR353W VTH2P40890 1549 aa9.01□□□□□ -0.97
TRR1YDR353W MAK11P20484 414 aaKnown RBP9.01□□□□□ -0.97
TRR1YDR353W STS1P38637 319 aa9.01□□□□□ -0.97
TRR1YDR353W POL5P39985 1022 aaKnown RBP9.01□□□□□ -0.97
TRR1YDR353W TY1B-JR2P47100 1755 aaKnown RBP9.01□□□□□ -0.97
TRR1YDR353W TY1B-ER2Q03619 1755 aa9.01□□□□□ -0.97
TRR1YDR353W TY1B-MR1Q04214 1755 aa9.01□□□□□ -0.97
TRR1YDR353W TY1B-MR2Q04670 1755 aaKnown RBP9.01□□□□□ -0.97
TRR1YDR353W TY1B-LR1Q12088 1755 aaKnown RBP9.01□□□□□ -0.97
TRR1YDR353W TY1B-NL1Q12112 1755 aa9.01□□□□□ -0.97
TRR1YDR353W TY1B-GR1Q12141 1755 aa9.01□□□□□ -0.97
TRR1YDR353W TY1B-BLQ12490 1755 aa9.01□□□□□ -0.97
TRR1YDR353W CDC25P04821 1589 aa9□□□□□ -0.97
TRR1YDR353W QCR6P00127 147 aa8.99□□□□□ -0.97
TRR1YDR353W DMA1P38823 416 aa8.99□□□□□ -0.97
TRR1YDR353W TSC11P40061 1430 aa8.97□□□□□ -0.97
TRR1YDR353W TY3B-GQ99315 1547 aa8.97□□□□□ -0.97
TRR1YDR353W YFR006WP43590 535 aa8.97□□□□□ -0.97
TRR1YDR353W CLC1P17891 233 aa8.96□□□□□ -0.98
TRR1YDR353W PIB1Q06651 286 aa8.96□□□□□ -0.98
TRR1YDR353W SSM4P40318 1319 aa8.96□□□□□ -0.98
TRR1YDR353W YBT1P32386 1661 aa8.95□□□□□ -0.98
TRR1YDR353W UBP9P39967 754 aa8.95□□□□□ -0.98
TRR1YDR353W RPS0BP46654 252 aaKnown RBP8.95□□□□□ -0.98
TRR1YDR353W GTT3P39996 337 aa8.94□□□□□ -0.98
TRR1YDR353W YFR016CP43597 1233 aaKnown RBP8.94□□□□□ -0.98
TRR1YDR353W SNT2P53127 1403 aa8.94□□□□□ -0.98
TRR1YDR353W PAN1P32521 1480 aa8.93□□□□□ -0.98
TRR1YDR353W ESC1Q03661 1658 aaKnown RBP8.93□□□□□ -0.98
TRR1YDR353W SPT7P35177 1332 aa8.92□□□□□ -0.98
TRR1YDR353W NTE1Q04958 1679 aa8.91□□□□□ -0.98
TRR1YDR353W IRC20Q06554 1556 aa8.9□□□□□ -0.99
TRR1YDR353W RPO21P04050 1733 aaKnown RBP8.89□□□□□ -0.99
TRR1YDR353W VMA1P17255 1071 aaKnown RBP8.89□□□□□ -0.99
TRR1YDR353W LEO1P38439 464 aa8.88□□□□□ -0.99
TRR1YDR353W IFH1P39520 1085 aa8.88□□□□□ -0.99
TRR1YDR353W RPA190P10964 1664 aaKnown RBP8.88□□□□□ -0.99
TRR1YDR353W PRS1P32895 427 aaKnown RBP8.87□□□□□ -0.99
TRR1YDR353W AIM44Q99299 758 aa8.87□□□□□ -0.99
TRR1YDR353W COQ8P27697 501 aa8.86□□□□□ -0.99
TRR1YDR353W EAF7P53911 425 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms