RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C ABP1P15891 592 aaKnown RBP3.34□□□□□ -1.87
SSD1YDR293C YTA7P40340 1379 aa3.34□□□□□ -1.87
SSD1YDR293C DNF2Q12675 1612 aa3.33□□□□□ -1.88
SSD1YDR293C TY2B-BQ12491 1770 aa3.33□□□□□ -1.88
SSD1YDR293C RPO21P04050 1733 aaKnown RBP3.32□□□□□ -1.88
SSD1YDR293C TY1B-DR3Q99231 1755 aa3.31□□□□□ -1.88
SSD1YDR293C RIM101P33400 625 aa3.31□□□□□ -1.88
SSD1YDR293C DOP1Q03921 1698 aa3.31□□□□□ -1.88
SSD1YDR293C TAF2P23255 1407 aa3.31□□□□□ -1.88
SSD1YDR293C RPO31P04051 1460 aa3.3□□□□□ -1.88
SSD1YDR293C SPO14P36126 1683 aa3.3□□□□□ -1.88
SSD1YDR293C LEU3P08638 886 aa3.3□□□□□ -1.88
SSD1YDR293C YPK9Q12697 1472 aa3.29□□□□□ -1.88
SSD1YDR293C NTE1Q04958 1679 aa3.29□□□□□ -1.88
SSD1YDR293C RPN1P38764 993 aaKnown RBP3.29□□□□□ -1.88
SSD1YDR293C GLC3P32775 704 aa3.28□□□□□ -1.88
SSD1YDR293C SPT21P35209 758 aa3.28□□□□□ -1.88
SSD1YDR293C RSM7P47150 247 aa3.28□□□□□ -1.88
SSD1YDR293C TY1B-JR2P47100 1755 aaKnown RBP3.28□□□□□ -1.89
SSD1YDR293C TY1B-ER2Q03619 1755 aa3.28□□□□□ -1.89
SSD1YDR293C TY1B-MR1Q04214 1755 aa3.28□□□□□ -1.89
SSD1YDR293C TY1B-MR2Q04670 1755 aaKnown RBP3.28□□□□□ -1.89
SSD1YDR293C TY1B-LR1Q12088 1755 aaKnown RBP3.28□□□□□ -1.89
SSD1YDR293C TY1B-NL1Q12112 1755 aa3.28□□□□□ -1.89
SSD1YDR293C TY1B-GR1Q12141 1755 aa3.28□□□□□ -1.89
SSD1YDR293C TY1B-BLQ12490 1755 aa3.28□□□□□ -1.89
SSD1YDR293C MGA2P40578 1113 aa3.27□□□□□ -1.89
SSD1YDR293C STU1P38198 1513 aa3.27□□□□□ -1.89
SSD1YDR293C MYO4P32492 1471 aa3.27□□□□□ -1.89
SSD1YDR293C RCR1P38212 213 aa3.26□□□□□ -1.89
SSD1YDR293C POL1P13382 1468 aa3.26□□□□□ -1.89
SSD1YDR293C SCT1P32784 759 aa3.26□□□□□ -1.89
SSD1YDR293C YRF1-1P0CX20 1796 aa3.26□□□□□ -1.89
SSD1YDR293C YRF1-5P0CX21 1796 aa3.26□□□□□ -1.89
SSD1YDR293C YRF1-8P0CX22 1796 aa3.26□□□□□ -1.89
SSD1YDR293C SMC4Q12267 1418 aa3.26□□□□□ -1.89
SSD1YDR293C HAA1Q12753 694 aaKnown RBP3.25□□□□□ -1.89
SSD1YDR293C TRM3Q07527 1436 aa3.25□□□□□ -1.89
SSD1YDR293C SET1P38827 1080 aaKnown RBP3.24□□□□□ -1.89
SSD1YDR293C RLF2Q12495 606 aa3.24□□□□□ -1.89
SSD1YDR293C MRM1P25270 412 aa3.24□□□□□ -1.89
SSD1YDR293C AAD16Q02895 342 aa3.24□□□□□ -1.89
SSD1YDR293C PDR15Q04182 1529 aaKnown RBP3.24□□□□□ -1.89
SSD1YDR293C MMS22Q06164 1454 aa3.23□□□□□ -1.89
SSD1YDR293C CHC1P22137 1653 aaKnown RBP3.23□□□□□ -1.89
SSD1YDR293C TY1B-NL2Q99337 1749 aaKnown RBP3.23□□□□□ -1.89
SSD1YDR293C PDR12Q02785 1511 aa3.22□□□□□ -1.89
SSD1YDR293C ECM5Q03214 1411 aa3.22□□□□□ -1.89
SSD1YDR293C MLP2P40457 1679 aa3.22□□□□□ -1.89
SSD1YDR293C PRI1P10363 409 aa3.22□□□□□ -1.89
SSD1YDR293C STH1P32597 1359 aa3.21□□□□□ -1.9
SSD1YDR293C KIN1P13185 1064 aa3.21□□□□□ -1.9
SSD1YDR293C DNF3Q12674 1656 aa3.21□□□□□ -1.9
SSD1YDR293C AI2P03876 854 aa3.21□□□□□ -1.9
SSD1YDR293C SAS10Q12136 610 aaPredicted RBP3.21□□□□□ -1.9
SSD1YDR293C RAM2P29703 316 aa3.2□□□□□ -1.9
SSD1YDR293C MIF2P35201 549 aa3.2□□□□□ -1.9
SSD1YDR293C TOP2P06786 1428 aaKnown RBP3.2□□□□□ -1.9
SSD1YDR293C SNT2P53127 1403 aa3.2□□□□□ -1.9
SSD1YDR293C YOR1P53049 1477 aa3.2□□□□□ -1.9
SSD1YDR293C BUD3P25558 1636 aa3.2□□□□□ -1.9
SSD1YDR293C YRF1-2P40105 1681 aa3.2□□□□□ -1.9
SSD1YDR293C YJL007CP47080 104 aa3.18□□□□□ -1.9
SSD1YDR293C ATF2P53296 535 aa3.18□□□□□ -1.9
SSD1YDR293C PIB1Q06651 286 aa3.18□□□□□ -1.9
SSD1YDR293C IES2P40154 320 aa3.18□□□□□ -1.9
SSD1YDR293C VPS15P22219 1454 aa3.18□□□□□ -1.9
SSD1YDR293C SPP41P38904 1435 aa3.18□□□□□ -1.9
SSD1YDR293C YML020WQ03722 664 aa3.17□□□□□ -1.9
SSD1YDR293C IKI3Q06706 1349 aaKnown RBP3.17□□□□□ -1.9
SSD1YDR293C YFR006WP43590 535 aa3.17□□□□□ -1.9
SSD1YDR293C SCC2Q04002 1493 aa3.17□□□□□ -1.9
SSD1YDR293C PDR10P51533 1564 aa3.17□□□□□ -1.9
SSD1YDR293C GUA1P38625 525 aaKnown RBP3.16□□□□□ -1.9
SSD1YDR293C YKR023WP36119 530 aaKnown RBP3.16□□□□□ -1.9
SSD1YDR293C TY3B-GQ99315 1547 aa3.16□□□□□ -1.9
SSD1YDR293C PBS2P08018 668 aa3.15□□□□□ -1.9
SSD1YDR293C DIT2P21595 489 aa3.15□□□□□ -1.9
SSD1YDR293C PKC1P24583 1151 aa3.15□□□□□ -1.9
SSD1YDR293C ULS1Q08562 1619 aa3.15□□□□□ -1.91
SSD1YDR293C BBC1P47068 1157 aa3.14□□□□□ -1.91
SSD1YDR293C CAT8P39113 1433 aa3.14□□□□□ -1.91
SSD1YDR293C GEA2P39993 1459 aaKnown RBP3.14□□□□□ -1.91
SSD1YDR293C MRPL32P25348 183 aa3.14□□□□□ -1.91
SSD1YDR293C RPL34BP40525 121 aaKnown RBP3.13□□□□□ -1.91
SSD1YDR293C GDB1Q06625 1536 aa3.13□□□□□ -1.91
SSD1YDR293C ERG12P07277 443 aa3.13□□□□□ -1.91
SSD1YDR293C CKB1P43639 278 aa3.13□□□□□ -1.91
SSD1YDR293C TFB3Q03290 321 aa3.13□□□□□ -1.91
SSD1YDR293C UFD4P33202 1483 aa3.13□□□□□ -1.91
SSD1YDR293C NUP170P38181 1502 aa3.12□□□□□ -1.91
SSD1YDR293C YPR204WQ08995 1032 aa3.11□□□□□ -1.91
SSD1YDR293C SLX8P40072 274 aa3.11□□□□□ -1.91
SSD1YDR293C PAN1P32521 1480 aa3.11□□□□□ -1.91
SSD1YDR293C BCH2P36122 765 aa3.11□□□□□ -1.91
SSD1YDR293C SEC3P33332 1336 aaKnown RBP3.11□□□□□ -1.91
SSD1YDR293C CPS1P27614 576 aa3.1□□□□□ -1.91
SSD1YDR293C CDC27P38042 758 aa3.1□□□□□ -1.91
SSD1YDR293C MAM3Q12296 706 aa3.1□□□□□ -1.91
SSD1YDR293C MMS1Q06211 1407 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms