RNA–Protein interactions for RNA: YDR266C

HEL2, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL2YDR266C STU1P38198 1513 aa11.44□□□□□ -0.58
HEL2YDR266C VPS4P52917 437 aa11.44□□□□□ -0.58
HEL2YDR266C SMC4Q12267 1418 aa11.43□□□□□ -0.58
HEL2YDR266C YPP1P46951 817 aa11.43□□□□□ -0.58
HEL2YDR266C PIL1P53252 339 aaKnown RBP11.43□□□□□ -0.58
HEL2YDR266C MLP2P40457 1679 aa11.42□□□□□ -0.58
HEL2YDR266C NOT3P06102 836 aaKnown RBP11.42□□□□□ -0.58
HEL2YDR266C SPT6P23615 1451 aaKnown RBP11.41□□□□□ -0.58
HEL2YDR266C ABP1P15891 592 aaKnown RBP11.41□□□□□ -0.58
HEL2YDR266C EDE1P34216 1381 aa11.41□□□□□ -0.58
HEL2YDR266C IRC20Q06554 1556 aa11.4□□□□□ -0.58
HEL2YDR266C DJP1P40564 432 aa11.4□□□□□ -0.58
HEL2YDR266C SWE1P32944 819 aa11.39□□□□□ -0.59
HEL2YDR266C MSH4P40965 878 aaPredicted RBP11.39□□□□□ -0.59
HEL2YDR266C SIC1P38634 284 aa11.37□□□□□ -0.59
HEL2YDR266C MSH3P25336 1018 aa11.35□□□□□ -0.59
HEL2YDR266C TAF2P23255 1407 aa11.34□□□□□ -0.59
HEL2YDR266C SCC2Q04002 1493 aa11.33□□□□□ -0.6
HEL2YDR266C PCT1P13259 424 aa11.33□□□□□ -0.6
HEL2YDR266C ETT1Q08421 412 aaKnown RBP11.33□□□□□ -0.6
HEL2YDR266C PAN1P32521 1480 aa11.32□□□□□ -0.6
HEL2YDR266C BYE1P36106 594 aa11.32□□□□□ -0.6
HEL2YDR266C PRP3Q03338 469 aaPredicted RBP11.32□□□□□ -0.6
HEL2YDR266C RPN1P38764 993 aaKnown RBP11.31□□□□□ -0.6
HEL2YDR266C DSN1P40568 576 aa11.31□□□□□ -0.6
HEL2YDR266C DOS2P54858 310 aa11.31□□□□□ -0.6
HEL2YDR266C RLP24Q07915 199 aaKnown RBP11.31□□□□□ -0.6
HEL2YDR266C CLB5P30283 435 aa11.3□□□□□ -0.6
HEL2YDR266C IOC4Q04213 475 aa11.3□□□□□ -0.6
HEL2YDR266C MSP1P28737 362 aa11.29□□□□□ -0.6
HEL2YDR266C KNS1P32350 737 aaPredicted RBP11.29□□□□□ -0.6
HEL2YDR266C NNF2P53253 936 aa11.29□□□□□ -0.6
HEL2YDR266C GRX3Q03835 250 aa11.28□□□□□ -0.6
HEL2YDR266C VPS24P36095 224 aaKnown RBP11.27□□□□□ -0.61
HEL2YDR266C MHP1P43638 1398 aa11.26□□□□□ -0.61
HEL2YDR266C ARL1P38116 183 aaKnown RBP11.26□□□□□ -0.61
HEL2YDR266C DNA2P38859 1522 aa11.26□□□□□ -0.61
HEL2YDR266C BMS1Q08965 1183 aaKnown RBP11.25□□□□□ -0.61
HEL2YDR266C BPT1P14772 1559 aa11.25□□□□□ -0.61
HEL2YDR266C REV3P14284 1504 aa11.25□□□□□ -0.61
HEL2YDR266C LTV1P34078 463 aa11.25□□□□□ -0.61
HEL2YDR266C MED8P38304 223 aa11.25□□□□□ -0.61
HEL2YDR266C CHZ1P40019 153 aaPredicted RBP11.23□□□□□ -0.61
HEL2YDR266C TAN1P53072 289 aaPredicted RBP11.23□□□□□ -0.61
HEL2YDR266C IFH1P39520 1085 aa11.23□□□□□ -0.61
HEL2YDR266C ECM1P39715 212 aa11.21□□□□□ -0.61
HEL2YDR266C POL1P13382 1468 aa11.21□□□□□ -0.61
HEL2YDR266C ECM16Q04217 1267 aaKnown RBP11.21□□□□□ -0.62
HEL2YDR266C KIP3P53086 805 aaKnown RBP11.2□□□□□ -0.62
HEL2YDR266C RPN7Q06103 429 aaKnown RBP11.2□□□□□ -0.62
HEL2YDR266C TPM2P40414 161 aa11.19□□□□□ -0.62
HEL2YDR266C NST1P53935 1240 aa11.19□□□□□ -0.62
HEL2YDR266C SRP54P20424 541 aaKnown RBP11.19□□□□□ -0.62
HEL2YDR266C NOP8Q08287 484 aaPredicted RBP11.19□□□□□ -0.62
HEL2YDR266C TRM3Q07527 1436 aa11.18□□□□□ -0.62
HEL2YDR266C CIN4P39110 191 aa11.17□□□□□ -0.62
HEL2YDR266C CBF5P33322 483 aaKnown RBP RIP-Chip data11.16□□□□□ -0.62not detected
HEL2YDR266C RAD2P07276 1031 aa11.15□□□□□ -0.62
HEL2YDR266C HSL1P34244 1518 aa11.15□□□□□ -0.62
HEL2YDR266C SWR1Q05471 1514 aa11.15□□□□□ -0.62
HEL2YDR266C VPS60Q03390 229 aa11.14□□□□□ -0.63
HEL2YDR266C YSH1Q06224 779 aaPredicted RBP11.14□□□□□ -0.63
HEL2YDR266C CLB1P24868 471 aa11.13□□□□□ -0.63
HEL2YDR266C TCD1P38756 429 aa11.13□□□□□ -0.63
HEL2YDR266C NOP14Q99207 810 aaKnown RBP11.13□□□□□ -0.63
HEL2YDR266C SSK2P53599 1579 aa11.13□□□□□ -0.63
HEL2YDR266C TSC11P40061 1430 aa11.13□□□□□ -0.63
HEL2YDR266C DEP1P31385 405 aa11.13□□□□□ -0.63
HEL2YDR266C SAP190P36123 1033 aa11.13□□□□□ -0.63
HEL2YDR266C CDC45Q08032 650 aa11.13□□□□□ -0.63
HEL2YDR266C LSP1Q12230 341 aaKnown RBP11.13□□□□□ -0.63
HEL2YDR266C GCN2P15442 1659 aa11.13□□□□□ -0.63
HEL2YDR266C SIN3P22579 1536 aa11.13□□□□□ -0.63
HEL2YDR266C TIF4632P39936 914 aaKnown RBP11.11□□□□□ -0.63
HEL2YDR266C RVB2Q12464 471 aaKnown RBP11.11□□□□□ -0.63
HEL2YDR266C GEA1P47102 1408 aaPredicted RBP11.11□□□□□ -0.63
HEL2YDR266C TEA1P47988 759 aa11.11□□□□□ -0.63
HEL2YDR266C TY1B-DR4Q07793 1604 aa11.11□□□□□ -0.63
HEL2YDR266C YCF1P39109 1515 aaKnown RBP11.1□□□□□ -0.63
HEL2YDR266C RPS0AP32905 252 aaKnown RBP11.09□□□□□ -0.63
HEL2YDR266C RNT1Q02555 471 aa11.09□□□□□ -0.63
HEL2YDR266C SWI3P32591 825 aa11.09□□□□□ -0.63
HEL2YDR266C NUP159P40477 1460 aa11.08□□□□□ -0.64
HEL2YDR266C VPS27P40343 622 aaKnown RBP11.08□□□□□ -0.64
HEL2YDR266C ESC2Q06340 456 aa11.08□□□□□ -0.64
HEL2YDR266C RAD51P25454 400 aa11.07□□□□□ -0.64
HEL2YDR266C RSC1P53236 928 aa11.07□□□□□ -0.64
HEL2YDR266C PAP2P53632 584 aaKnown RBP11.07□□□□□ -0.64
HEL2YDR266C HOS3Q02959 697 aaKnown RBP11.07□□□□□ -0.64
HEL2YDR266C VPS72Q03388 795 aa11.07□□□□□ -0.64
HEL2YDR266C RPP0P05317 312 aaKnown RBP11.05□□□□□ -0.64
HEL2YDR266C LCD1Q04377 747 aa11.05□□□□□ -0.64
HEL2YDR266C HIR3P47171 1648 aa11.04□□□□□ -0.64
HEL2YDR266C RRP15Q06511 250 aaPredicted RBP11.03□□□□□ -0.64
HEL2YDR266C RAD9P14737 1309 aa11.03□□□□□ -0.64
HEL2YDR266C UTP13Q05946 817 aaKnown RBP11.03□□□□□ -0.64
HEL2YDR266C YOL087CQ99247 1116 aa11.03□□□□□ -0.64
HEL2YDR266C NUP157P40064 1391 aaKnown RBP11.02□□□□□ -0.64
HEL2YDR266C UBP10P53874 792 aaPredicted RBP11.02□□□□□ -0.65
HEL2YDR266C RIM101P33400 625 aa11.01□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 1174.4 ms