RNA–Protein interactions for RNA: YDR260C

SWM1, Transcript of Subunit of the anaphase-promoting complex (APC), yeastyeast

Gene SWM1, Length 513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM1YDR260C TY1B-NL1Q12112 1755 aa13.7□□□□□ -0.22
SWM1YDR260C TY1B-GR1Q12141 1755 aa13.7□□□□□ -0.22
SWM1YDR260C TY1B-BLQ12490 1755 aa13.7□□□□□ -0.22
SWM1YDR260C NTE1Q04958 1679 aa13.69□□□□□ -0.22
SWM1YDR260C VTH1P40438 1549 aa13.66□□□□□ -0.22
SWM1YDR260C VTH2P40890 1549 aa13.66□□□□□ -0.22
SWM1YDR260C TSC11P40061 1430 aa13.65□□□□□ -0.22
SWM1YDR260C DRS2P39524 1355 aa13.65□□□□□ -0.22
SWM1YDR260C RPO21P04050 1733 aaKnown RBP13.61□□□□□ -0.23
SWM1YDR260C YFR006WP43590 535 aa13.54□□□□□ -0.24
SWM1YDR260C MYO4P32492 1471 aa13.5□□□□□ -0.25
SWM1YDR260C IRC20Q06554 1556 aa13.47□□□□□ -0.25
SWM1YDR260C SNQ2P32568 1501 aaKnown RBP13.46□□□□□ -0.25
SWM1YDR260C NUP170P38181 1502 aa13.44□□□□□ -0.26
SWM1YDR260C DNF2Q12675 1612 aa13.43□□□□□ -0.26
SWM1YDR260C SNT2P53127 1403 aa13.41□□□□□ -0.26
SWM1YDR260C ULS1Q08562 1619 aa13.38□□□□□ -0.27
SWM1YDR260C SPO14P36126 1683 aa13.37□□□□□ -0.27
SWM1YDR260C MET10P39692 1035 aa13.36□□□□□ -0.27
SWM1YDR260C YTA7P40340 1379 aa13.35□□□□□ -0.27
SWM1YDR260C RTT106P40161 455 aa13.35□□□□□ -0.27
SWM1YDR260C DOP1Q03921 1698 aa13.34□□□□□ -0.27
SWM1YDR260C STH1P32597 1359 aa13.32□□□□□ -0.28
SWM1YDR260C NUP157P40064 1391 aaKnown RBP13.22□□□□□ -0.29
SWM1YDR260C PDR12Q02785 1511 aa13.21□□□□□ -0.29
SWM1YDR260C IQG1Q12280 1495 aa13.2□□□□□ -0.3
SWM1YDR260C GDB1Q06625 1536 aa13.19□□□□□ -0.3
SWM1YDR260C SAS10Q12136 610 aaPredicted RBP13.19□□□□□ -0.3
SWM1YDR260C PDR10P51533 1564 aa13.19□□□□□ -0.3
SWM1YDR260C MLP2P40457 1679 aa13.18□□□□□ -0.3
SWM1YDR260C PDR15Q04182 1529 aaKnown RBP13.13□□□□□ -0.31
SWM1YDR260C YOR093CQ12275 1648 aa13.12□□□□□ -0.31
SWM1YDR260C TRM3Q07527 1436 aa13.11□□□□□ -0.31
SWM1YDR260C IFH1P39520 1085 aa13.08□□□□□ -0.32
SWM1YDR260C ARO1P08566 1588 aaKnown RBP13.01□□□□□ -0.33
SWM1YDR260C BUD3P25558 1636 aa13.01□□□□□ -0.33
SWM1YDR260C CHC1P22137 1653 aaKnown RBP12.98□□□□□ -0.33
SWM1YDR260C DNF3Q12674 1656 aa12.89□□□□□ -0.35
SWM1YDR260C CKB1P43639 278 aa12.88□□□□□ -0.35
SWM1YDR260C TAF7Q05021 590 aa12.87□□□□□ -0.35
SWM1YDR260C GEA1P47102 1408 aaPredicted RBP12.85□□□□□ -0.35
SWM1YDR260C YBT1P32386 1661 aa12.83□□□□□ -0.35
SWM1YDR260C TY3B-GQ99315 1547 aa12.83□□□□□ -0.35
SWM1YDR260C CAT8P39113 1433 aa12.8□□□□□ -0.36
SWM1YDR260C YAP3P38749 330 aa12.78□□□□□ -0.36
SWM1YDR260C BNR1P40450 1375 aa12.78□□□□□ -0.36
SWM1YDR260C SEC7P11075 2009 aaKnown RBP12.77□□□□□ -0.37
SWM1YDR260C YSP2Q06681 1438 aa12.77□□□□□ -0.37
SWM1YDR260C MAK10Q02197 733 aa12.7□□□□□ -0.38
SWM1YDR260C USO1P25386 1790 aa12.65□□□□□ -0.38
SWM1YDR260C URN1Q06525 465 aaKnown RBP12.56□□□□□ -0.4
SWM1YDR260C SRB8P25648 1427 aa12.51□□□□□ -0.41
SWM1YDR260C IML1P47170 1584 aa12.5□□□□□ -0.41
SWM1YDR260C TYS1P36421 394 aaKnown RBP12.49□□□□□ -0.41
SWM1YDR260C BUD21Q08492 214 aaPredicted RBP12.48□□□□□ -0.41
SWM1YDR260C IPL1P38991 367 aa12.47□□□□□ -0.41
SWM1YDR260C THI12P42883 340 aa12.46□□□□□ -0.41
SWM1YDR260C THI5P43534 340 aa12.46□□□□□ -0.41
SWM1YDR260C THI11P47183 340 aa12.46□□□□□ -0.41
SWM1YDR260C THI13Q07748 340 aa12.46□□□□□ -0.41
SWM1YDR260C NUP188P52593 1655 aaKnown RBP12.43□□□□□ -0.42
SWM1YDR260C VMR1P38735 1592 aa12.39□□□□□ -0.43
SWM1YDR260C PDR5P33302 1511 aaKnown RBP12.36□□□□□ -0.43
SWM1YDR260C YMR196WQ04336 1088 aa12.35□□□□□ -0.43
SWM1YDR260C TY1B-NL2Q99337 1749 aaKnown RBP12.31□□□□□ -0.44
SWM1YDR260C HAP1P0CE41 1502 aa12.28□□□□□ -0.44
SWM1YDR260C KRE5P22023 1365 aa12.19□□□□□ -0.46
SWM1YDR260C APP1P53933 587 aa12.17□□□□□ -0.46
SWM1YDR260C PDR11P40550 1411 aa12.17□□□□□ -0.46
SWM1YDR260C RIA1P53893 1110 aa12.16□□□□□ -0.46
SWM1YDR260C SSM4P40318 1319 aa12.13□□□□□ -0.47
SWM1YDR260C GLN1P32288 370 aaKnown RBP12.12□□□□□ -0.47
SWM1YDR260C MRX12P47084 519 aa12.11□□□□□ -0.47
SWM1YDR260C YAH1Q12184 172 aaKnown RBP12.1□□□□□ -0.47
SWM1YDR260C IKI3Q06706 1349 aaKnown RBP12.1□□□□□ -0.47
SWM1YDR260C PTP3P40048 928 aa12.04□□□□□ -0.48
SWM1YDR260C YIL055CP40523 627 aaKnown RBP12.04□□□□□ -0.48
SWM1YDR260C YNR029CP53729 429 aaKnown RBP12.04□□□□□ -0.48
SWM1YDR260C CFT1Q06632 1357 aaKnown RBP12.04□□□□□ -0.48
SWM1YDR260C BFR2Q06631 534 aaKnown RBP12.02□□□□□ -0.49
SWM1YDR260C GCN2P15442 1659 aa12□□□□□ -0.49
SWM1YDR260C CAB1Q04430 367 aa11.99□□□□□ -0.49
SWM1YDR260C REB1P21538 810 aa11.98□□□□□ -0.49
SWM1YDR260C BCK1Q01389 1478 aa11.96□□□□□ -0.49
SWM1YDR260C RAD9P14737 1309 aa11.95□□□□□ -0.5
SWM1YDR260C TY3B-IQ7LHG5 1498 aaKnown RBP11.94□□□□□ -0.5
SWM1YDR260C ENT1Q12518 454 aa11.93□□□□□ -0.5
SWM1YDR260C NUP192P47054 1683 aa11.9□□□□□ -0.5
SWM1YDR260C PAF1P38351 445 aa11.88□□□□□ -0.51
SWM1YDR260C ENV9Q08651 330 aa11.88□□□□□ -0.51
SWM1YDR260C RAV1P47104 1357 aa11.87□□□□□ -0.51
SWM1YDR260C ALD4P46367 519 aaKnown RBP11.85□□□□□ -0.51
SWM1YDR260C YMR074CQ04773 145 aa11.84□□□□□ -0.51
SWM1YDR260C PRI1P10363 409 aa11.82□□□□□ -0.52
SWM1YDR260C IMH1Q06704 911 aaKnown RBP11.8□□□□□ -0.52
SWM1YDR260C RTC1Q08281 1341 aa11.78□□□□□ -0.52
SWM1YDR260C RRP5Q05022 1729 aaKnown RBP11.74□□□□□ -0.53
SWM1YDR260C BUD31P25337 157 aaPredicted RBP11.74□□□□□ -0.53
SWM1YDR260C PRP45P28004 379 aaPredicted RBP11.74□□□□□ -0.53
SWM1YDR260C TAF5P38129 798 aa11.73□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms