RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W SLD2P34252 453 aa7.1□□□□□ -1.27
UBC1YDR177W EDS1P38073 919 aa7.1□□□□□ -1.27
UBC1YDR177W CSN12P47130 423 aa7.09□□□□□ -1.27
UBC1YDR177W NOP7P53261 605 aaKnown RBP7.09□□□□□ -1.27
UBC1YDR177W UBP10P53874 792 aaPredicted RBP7.09□□□□□ -1.27
UBC1YDR177W PTC3P34221 468 aaKnown RBP7.08□□□□□ -1.28
UBC1YDR177W DBP1P24784 617 aaKnown RBP7.07□□□□□ -1.28
UBC1YDR177W PSE1P32337 1089 aaKnown RBP7.07□□□□□ -1.28
UBC1YDR177W UBP14P38237 781 aaKnown RBP7.06□□□□□ -1.28
UBC1YDR177W STS1P38637 319 aa7.06□□□□□ -1.28
UBC1YDR177W YJL007CP47080 104 aa7.06□□□□□ -1.28
UBC1YDR177W BIM1P40013 344 aa7.05□□□□□ -1.28
UBC1YDR177W RPL34AP87262 121 aaPredicted RBP7.05□□□□□ -1.28
UBC1YDR177W VHR2P40041 505 aa7.04□□□□□ -1.28
UBC1YDR177W PKC1P24583 1151 aa7.03□□□□□ -1.28
UBC1YDR177W SLX5P32828 619 aaKnown RBP7.03□□□□□ -1.28
UBC1YDR177W YFR006WP43590 535 aa7.02□□□□□ -1.29
UBC1YDR177W YOR238WQ08634 303 aa7.02□□□□□ -1.29
UBC1YDR177W ATH1P48016 1211 aa7.01□□□□□ -1.29
UBC1YDR177W YBL036CP38197 257 aa6.99□□□□□ -1.29
UBC1YDR177W ATG32P40458 529 aa6.99□□□□□ -1.29
UBC1YDR177W TEA1P47988 759 aa6.99□□□□□ -1.29
UBC1YDR177W SNU71P53207 620 aaKnown RBP6.99□□□□□ -1.29
UBC1YDR177W YDR090CQ03193 310 aa6.99□□□□□ -1.29
UBC1YDR177W RAD54P32863 898 aa6.98□□□□□ -1.29
UBC1YDR177W CLB5P30283 435 aa6.97□□□□□ -1.29
UBC1YDR177W GLN1P32288 370 aaKnown RBP6.97□□□□□ -1.29
UBC1YDR177W MAP2P38174 421 aaKnown RBP6.97□□□□□ -1.29
UBC1YDR177W GRE2Q12068 342 aaKnown RBP6.97□□□□□ -1.29
UBC1YDR177W TIF1P10081 395 aaKnown RBP6.96□□□□□ -1.3
UBC1YDR177W GUT1P32190 709 aa6.96□□□□□ -1.3
UBC1YDR177W YLR326WQ06170 240 aaKnown RBP6.96□□□□□ -1.3
UBC1YDR177W NAP1P25293 417 aaKnown RBP6.95□□□□□ -1.3
UBC1YDR177W CDC3P32457 520 aaKnown RBP6.95□□□□□ -1.3
UBC1YDR177W SIS2P36024 562 aa6.94□□□□□ -1.3
UBC1YDR177W CSE4P36012 229 aa6.93□□□□□ -1.3
UBC1YDR177W RTG2P32608 588 aaKnown RBP6.92□□□□□ -1.3
UBC1YDR177W ORC1P54784 914 aaPredicted RBP6.92□□□□□ -1.3
UBC1YDR177W YPR204WQ08995 1032 aa6.92□□□□□ -1.3
UBC1YDR177W CPS1P27614 576 aa6.91□□□□□ -1.3
UBC1YDR177W YMR196WQ04336 1088 aa6.91□□□□□ -1.3
UBC1YDR177W RPP1BP10622 106 aaKnown RBP6.9□□□□□ -1.3
UBC1YDR177W YGR273CP53329 174 aa6.9□□□□□ -1.3
UBC1YDR177W VMA1P17255 1071 aaKnown RBP6.89□□□□□ -1.31
UBC1YDR177W NSR1P27476 414 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
UBC1YDR177W TTI1P36097 1038 aa6.89□□□□□ -1.31
UBC1YDR177W YAP5P40574 245 aa6.89□□□□□ -1.31
UBC1YDR177W MRX12P47084 519 aa6.89□□□□□ -1.31
UBC1YDR177W KEX1P09620 729 aa6.88□□□□□ -1.31
UBC1YDR177W HEM3P28789 327 aa6.88□□□□□ -1.31
UBC1YDR177W PCS60P38137 543 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
UBC1YDR177W MET10P39692 1035 aa6.87□□□□□ -1.31
UBC1YDR177W ERG12P07277 443 aa6.86□□□□□ -1.31
UBC1YDR177W SPT5P27692 1063 aaKnown RBP6.86□□□□□ -1.31
UBC1YDR177W ASF1P32447 279 aa6.86□□□□□ -1.31
UBC1YDR177W YGL015CP33199 130 aa6.86□□□□□ -1.31
UBC1YDR177W ORC6P38826 435 aa6.86□□□□□ -1.31
UBC1YDR177W KTR1P27810 393 aaKnown RBP6.85□□□□□ -1.31
UBC1YDR177W BIO2P32451 375 aa6.85□□□□□ -1.31
UBC1YDR177W SSF1P38789 453 aaPredicted RBP6.85□□□□□ -1.31
UBC1YDR177W TIF4632P39936 914 aaKnown RBP6.85□□□□□ -1.31
UBC1YDR177W HST2P53686 357 aa6.85□□□□□ -1.31
UBC1YDR177W TYW1Q08960 810 aaKnown RBP6.85□□□□□ -1.31
UBC1YDR177W YNL108CP53929 270 aa6.84□□□□□ -1.31
UBC1YDR177W PKH3Q03306 898 aaPredicted RBP6.84□□□□□ -1.31
UBC1YDR177W RAD59Q12223 238 aa6.84□□□□□ -1.31
UBC1YDR177W MMP1Q12372 583 aa6.84□□□□□ -1.31
UBC1YDR177W PIB1Q06651 286 aa6.82□□□□□ -1.32
UBC1YDR177W RGR1P19263 1082 aa6.81□□□□□ -1.32
UBC1YDR177W NOB1Q08444 459 aaKnown RBP6.81□□□□□ -1.32
UBC1YDR177W GYP5Q12344 894 aa6.81□□□□□ -1.32
UBC1YDR177W YPP1P46951 817 aa6.8□□□□□ -1.32
UBC1YDR177W FPK1P53739 893 aa6.8□□□□□ -1.32
UBC1YDR177W CSC1Q06538 782 aa6.8□□□□□ -1.32
UBC1YDR177W HAT1Q12341 374 aa6.8□□□□□ -1.32
UBC1YDR177W ARG8P18544 423 aa6.79□□□□□ -1.32
UBC1YDR177W SEC20P28791 383 aa6.79□□□□□ -1.32
UBC1YDR177W RRN6P32786 894 aa6.79□□□□□ -1.32
UBC1YDR177W STM1P39015 273 aaKnown RBP6.79□□□□□ -1.32
UBC1YDR177W NIS1P53939 407 aa6.79□□□□□ -1.32
UBC1YDR177W SAM3Q08986 587 aa6.79□□□□□ -1.32
UBC1YDR177W SUP45P12385 437 aaKnown RBP6.78□□□□□ -1.32
UBC1YDR177W MVP1P40959 511 aaKnown RBP6.78□□□□□ -1.32
UBC1YDR177W ESS1P22696 170 aa6.76□□□□□ -1.33
UBC1YDR177W PUP1P25043 261 aa6.76□□□□□ -1.33
UBC1YDR177W PAM1P37304 830 aaKnown RBP6.76□□□□□ -1.33
UBC1YDR177W SEN54Q02825 467 aaPredicted RBP6.76□□□□□ -1.33
UBC1YDR177W ITT1Q04638 464 aa6.76□□□□□ -1.33
UBC1YDR177W PEX21P50091 288 aa6.75□□□□□ -1.33
UBC1YDR177W ENO1P00924 437 aaKnown RBP6.74□□□□□ -1.33
UBC1YDR177W GTT3P39996 337 aa6.74□□□□□ -1.33
UBC1YDR177W LAM6Q08001 693 aa6.74□□□□□ -1.33
UBC1YDR177W TFB4Q12004 338 aa6.74□□□□□ -1.33
UBC1YDR177W ENO2P00925 437 aaKnown RBP6.73□□□□□ -1.33
UBC1YDR177W AI4P03878 556 aa6.73□□□□□ -1.33
UBC1YDR177W TGL4P36165 910 aa6.73□□□□□ -1.33
UBC1YDR177W SOL3P38858 249 aa6.73□□□□□ -1.33
UBC1YDR177W YPR109WQ06104 294 aa6.73□□□□□ -1.33
UBC1YDR177W MAK16P10962 306 aaPredicted RBP6.72□□□□□ -1.33
UBC1YDR177W IOC4Q04213 475 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms