RNA–Protein interactions for RNA: YDR004W

RAD57, Transcript of Protein that stimulates strand exchange, yeast

Gene RAD57, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD57	YDR004W	HIR3	P47171	1648 aa		8.4	□□□□□ -1.06
RAD57	YDR004W	SET1	P38827	1080 aa	Known RBP	8.4	□□□□□ -1.06
RAD57	YDR004W	RCR1	P38212	213 aa		8.39	□□□□□ -1.07
RAD57	YDR004W	ECM5	Q03214	1411 aa		8.37	□□□□□ -1.07
RAD57	YDR004W	YOL036W	Q08206	761 aa		8.35	□□□□□ -1.07
RAD57	YDR004W	MAK11	P20484	414 aa	Known RBP	8.35	□□□□□ -1.07
RAD57	YDR004W	IFH1	P39520	1085 aa		8.35	□□□□□ -1.07
RAD57	YDR004W	SET4	P42948	560 aa		8.35	□□□□□ -1.07
RAD57	YDR004W	THO2	P53552	1597 aa	Known RBP	8.34	□□□□□ -1.07
RAD57	YDR004W	CHL1	P22516	861 aa	Predicted RBP	8.34	□□□□□ -1.07
RAD57	YDR004W	RGA1	P39083	1007 aa		8.32	□□□□□ -1.08
RAD57	YDR004W	CKB1	P43639	278 aa		8.31	□□□□□ -1.08
RAD57	YDR004W	SAP30	P38429	201 aa		8.3	□□□□□ -1.08
RAD57	YDR004W	VPS29	P38759	282 aa		8.3	□□□□□ -1.08
RAD57	YDR004W	BUD4	P47136	1447 aa		8.3	□□□□□ -1.08
RAD57	YDR004W	SPB4	P25808	606 aa	Predicted RBP	8.28	□□□□□ -1.08
RAD57	YDR004W	VPS70	P47161	811 aa		8.28	□□□□□ -1.08
RAD57	YDR004W	MDS3	P53094	1487 aa		8.27	□□□□□ -1.09
RAD57	YDR004W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	8.27	□□□□□ -1.09	not detected
RAD57	YDR004W	YPR148C	Q06523	435 aa		8.25	□□□□□ -1.09
RAD57	YDR004W	PRE3	P38624	215 aa		8.24	□□□□□ -1.09
RAD57	YDR004W	TFG1	P41895	735 aa	Predicted RBP	8.24	□□□□□ -1.09
RAD57	YDR004W	XDJ1	P39102	459 aa		8.23	□□□□□ -1.09
RAD57	YDR004W	COQ8	P27697	501 aa		8.22	□□□□□ -1.09
RAD57	YDR004W	DMA2	P53924	522 aa		8.22	□□□□□ -1.09
RAD57	YDR004W	PEP1	P32319	1579 aa		8.21	□□□□□ -1.09
RAD57	YDR004W	DAN4	P47179	1161 aa		8.21	□□□□□ -1.1
RAD57	YDR004W	NOP53	Q12080	455 aa	Known RBP	8.21	□□□□□ -1.1
RAD57	YDR004W	DBP1	P24784	617 aa	Known RBP	8.2	□□□□□ -1.1
RAD57	YDR004W	MIF2	P35201	549 aa		8.2	□□□□□ -1.1
RAD57	YDR004W	RPN1	P38764	993 aa	Known RBP	8.2	□□□□□ -1.1
RAD57	YDR004W	XRN1	P22147	1528 aa	Known RBP	8.19	□□□□□ -1.1
RAD57	YDR004W	YDL129W	Q07555	291 aa		8.18	□□□□□ -1.1
RAD57	YDR004W	YFR006W	P43590	535 aa		8.16	□□□□□ -1.1
RAD57	YDR004W	ATG2	P53855	1592 aa		8.16	□□□□□ -1.1
RAD57	YDR004W	STS1	P38637	319 aa		8.15	□□□□□ -1.1
RAD57	YDR004W	VRP1	P37370	817 aa		8.13	□□□□□ -1.11
RAD57	YDR004W	DPS1	P04802	557 aa	Known RBP	8.12	□□□□□ -1.11
RAD57	YDR004W	REV3	P14284	1504 aa		8.12	□□□□□ -1.11
RAD57	YDR004W	PBS2	P08018	668 aa		8.11	□□□□□ -1.11
RAD57	YDR004W	SAM3	Q08986	587 aa		8.1	□□□□□ -1.11
RAD57	YDR004W	ABP1	P15891	592 aa	Known RBP	8.09	□□□□□ -1.12
RAD57	YDR004W	EDS1	P38073	919 aa		8.09	□□□□□ -1.12
RAD57	YDR004W	JIP4	Q03361	876 aa		8.09	□□□□□ -1.12
RAD57	YDR004W	BPT1	P14772	1559 aa		8.07	□□□□□ -1.12
RAD57	YDR004W	DSF2	P38213	736 aa		8.07	□□□□□ -1.12
RAD57	YDR004W	PTC3	P34221	468 aa	Known RBP	8.06	□□□□□ -1.12
RAD57	YDR004W	REF2	P42073	533 aa	Predicted RBP	8.06	□□□□□ -1.12
RAD57	YDR004W	SRC1	Q03707	834 aa		8.06	□□□□□ -1.12
RAD57	YDR004W	VMA1	P17255	1071 aa	Known RBP	8.04	□□□□□ -1.12
RAD57	YDR004W	MAM3	Q12296	706 aa		8.01	□□□□□ -1.13
RAD57	YDR004W	YDR344C	Q05510	147 aa		7.99	□□□□□ -1.13
RAD57	YDR004W	ATH1	P48016	1211 aa		7.97	□□□□□ -1.13
RAD57	YDR004W	MAK21	Q12176	1025 aa	Known RBP	7.97	□□□□□ -1.13
RAD57	YDR004W	YNR021W	P53723	404 aa	Known RBP	7.97	□□□□□ -1.13
RAD57	YDR004W	SSK2	P53599	1579 aa		7.96	□□□□□ -1.14
RAD57	YDR004W	COX6	P00427	148 aa		7.95	□□□□□ -1.14
RAD57	YDR004W	GRE2	Q12068	342 aa	Known RBP	7.95	□□□□□ -1.14
RAD57	YDR004W	SIN3	P22579	1536 aa		7.95	□□□□□ -1.14
RAD57	YDR004W	GUT1	P32190	709 aa		7.94	□□□□□ -1.14
RAD57	YDR004W	RLF2	Q12495	606 aa		7.94	□□□□□ -1.14
RAD57	YDR004W	IES2	P40154	320 aa		7.93	□□□□□ -1.14
RAD57	YDR004W	TAF2	P23255	1407 aa		7.92	□□□□□ -1.14
RAD57	YDR004W	YCF1	P39109	1515 aa	Known RBP	7.92	□□□□□ -1.14
RAD57	YDR004W	SSN2	P38931	1420 aa		7.92	□□□□□ -1.14
RAD57	YDR004W	PTC4	P38089	393 aa		7.91	□□□□□ -1.14
RAD57	YDR004W	SKI3	P17883	1432 aa	Known RBP	7.91	□□□□□ -1.14
RAD57	YDR004W	ESP1	Q03018	1630 aa		7.9	□□□□□ -1.14
RAD57	YDR004W	GYP5	Q12344	894 aa		7.89	□□□□□ -1.15
RAD57	YDR004W	KIN1	P13185	1064 aa		7.88	□□□□□ -1.15
RAD57	YDR004W	VHR2	P40041	505 aa		7.88	□□□□□ -1.15
RAD57	YDR004W	DIT2	P21595	489 aa		7.87	□□□□□ -1.15
RAD57	YDR004W	GLC3	P32775	704 aa		7.87	□□□□□ -1.15
RAD57	YDR004W	KIC1	P38692	1080 aa		7.87	□□□□□ -1.15
RAD57	YDR004W	NUP42	P49686	430 aa	Known RBP	7.87	□□□□□ -1.15
RAD57	YDR004W	AIM7	Q12156	149 aa		7.87	□□□□□ -1.15
RAD57	YDR004W	UBP14	P38237	781 aa	Known RBP	7.85	□□□□□ -1.15
RAD57	YDR004W	YEL023C	P39992	682 aa		7.85	□□□□□ -1.15
RAD57	YDR004W	ATF2	P53296	535 aa		7.85	□□□□□ -1.15
RAD57	YDR004W	HTA1	P04911	132 aa	Known RBP	7.84	□□□□□ -1.15
RAD57	YDR004W	HTA2	P04912	132 aa		7.84	□□□□□ -1.15
RAD57	YDR004W	YGR273C	P53329	174 aa		7.84	□□□□□ -1.16
RAD57	YDR004W	ELP4	Q02884	456 aa	Known RBP	7.84	□□□□□ -1.16
RAD57	YDR004W	HGH1	P48362	394 aa	Known RBP	7.83	□□□□□ -1.16
RAD57	YDR004W	YLR326W	Q06170	240 aa	Known RBP	7.82	□□□□□ -1.16
RAD57	YDR004W	DCW1	P36091	449 aa		7.81	□□□□□ -1.16
RAD57	YDR004W	YDR090C	Q03193	310 aa		7.81	□□□□□ -1.16
RAD57	YDR004W	TY2B-LR1	P0C2J3	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-F	P0CX63	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-GR2	P0CX64	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-C	P25384	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-DR2	Q03494	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY1B-DR1	Q03855	1755 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-DR3	Q07791	1770 aa	Known RBP	7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-OR1	Q12113	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-DR1	Q12472	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	TY2B-OR2	Q12501	1770 aa		7.8	□□□□□ -1.16
RAD57	YDR004W	ESC1	Q03661	1658 aa	Known RBP	7.8	□□□□□ -1.16
RAD57	YDR004W	UFD4	P33202	1483 aa		7.79	□□□□□ -1.16
RAD57	YDR004W	RAD54	P32863	898 aa		7.79	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms