RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeastyeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCA1YBR295W OPY1P38271 328 aa5.65□□□□□ -1.51
PCA1YBR295W PRP3Q03338 469 aaPredicted RBP5.65□□□□□ -1.51
PCA1YBR295W PRS1P32895 427 aaKnown RBP5.64□□□□□ -1.51
PCA1YBR295W DSN1P40568 576 aa5.64□□□□□ -1.51
PCA1YBR295W TY1B-AO13527 1196 aaKnown RBP5.64□□□□□ -1.51
PCA1YBR295W MCM1P11746 286 aa5.64□□□□□ -1.51
PCA1YBR295W RPC31P17890 251 aa5.63□□□□□ -1.51
PCA1YBR295W CBF5P33322 483 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PCA1YBR295W SIC1P38634 284 aa5.63□□□□□ -1.51
PCA1YBR295W SEC9P40357 651 aa5.63□□□□□ -1.51
PCA1YBR295W YPP1P46951 817 aa5.63□□□□□ -1.51
PCA1YBR295W NOP58Q12499 511 aaKnown RBP5.63□□□□□ -1.51
PCA1YBR295W POL5P39985 1022 aaKnown RBP5.62□□□□□ -1.51
PCA1YBR295W CFT1Q06632 1357 aaKnown RBP5.61□□□□□ -1.51
PCA1YBR295W SUP35P05453 685 aaKnown RBP5.61□□□□□ -1.51
PCA1YBR295W SMC3P47037 1230 aa5.61□□□□□ -1.51
PCA1YBR295W SNF7P39929 240 aaKnown RBP5.6□□□□□ -1.51
PCA1YBR295W HSL1P34244 1518 aa5.6□□□□□ -1.51
PCA1YBR295W ISW1P38144 1129 aa5.6□□□□□ -1.51
PCA1YBR295W ATG36P46983 293 aa5.6□□□□□ -1.51
PCA1YBR295W NST1P53935 1240 aa5.6□□□□□ -1.51
PCA1YBR295W DMA1P38823 416 aa5.6□□□□□ -1.51
PCA1YBR295W DEP1P31385 405 aa5.59□□□□□ -1.51
PCA1YBR295W LEM3P42838 414 aa5.59□□□□□ -1.51
PCA1YBR295W TPO2P53283 614 aa5.58□□□□□ -1.52
PCA1YBR295W DAL5P15365 543 aa5.57□□□□□ -1.52
PCA1YBR295W NOP8Q08287 484 aaPredicted RBP5.56□□□□□ -1.52
PCA1YBR295W STH1P32597 1359 aa5.56□□□□□ -1.52
PCA1YBR295W SPT16P32558 1035 aaKnown RBP5.56□□□□□ -1.52
PCA1YBR295W DJP1P40564 432 aa5.56□□□□□ -1.52
PCA1YBR295W RSC8P43609 557 aaKnown RBP5.56□□□□□ -1.52
PCA1YBR295W TAN1P53072 289 aaPredicted RBP5.56□□□□□ -1.52
PCA1YBR295W SWR1Q05471 1514 aa5.56□□□□□ -1.52
PCA1YBR295W DSF2P38213 736 aa5.55□□□□□ -1.52
PCA1YBR295W BMS1Q08965 1183 aaKnown RBP5.55□□□□□ -1.52
PCA1YBR295W YLL054CQ12244 843 aa5.55□□□□□ -1.52
PCA1YBR295W TAF13P11747 167 aa5.55□□□□□ -1.52
PCA1YBR295W ROX1P25042 368 aa5.54□□□□□ -1.52
PCA1YBR295W BDP1P46678 594 aa5.54□□□□□ -1.52
PCA1YBR295W CEF1Q03654 590 aaPredicted RBP5.54□□□□□ -1.52
PCA1YBR295W SAP190P36123 1033 aa5.53□□□□□ -1.52
PCA1YBR295W RIM101P33400 625 aa5.53□□□□□ -1.52
PCA1YBR295W SPB4P25808 606 aaPredicted RBP5.53□□□□□ -1.52
PCA1YBR295W MGA2P40578 1113 aa5.53□□□□□ -1.52
PCA1YBR295W MPP10P47083 593 aaKnown RBP5.53□□□□□ -1.52
PCA1YBR295W SPT6P23615 1451 aaKnown RBP5.52□□□□□ -1.53
PCA1YBR295W AIM20P40451 204 aa5.52□□□□□ -1.53
PCA1YBR295W APL5Q08951 932 aaKnown RBP5.52□□□□□ -1.53
PCA1YBR295W SLN1P39928 1220 aaPredicted RBP5.52□□□□□ -1.53
PCA1YBR295W PEA2P40091 420 aa5.52□□□□□ -1.53
PCA1YBR295W VPS72Q03388 795 aa5.52□□□□□ -1.53
PCA1YBR295W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
PCA1YBR295W NAB3P38996 802 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
PCA1YBR295W CLB1P24868 471 aa5.51□□□□□ -1.53
PCA1YBR295W PUP2P32379 260 aa5.51□□□□□ -1.53
PCA1YBR295W HIR3P47171 1648 aa5.51□□□□□ -1.53
PCA1YBR295W PHO87P25360 923 aa5.51□□□□□ -1.53
PCA1YBR295W BYE1P36106 594 aa5.51□□□□□ -1.53
PCA1YBR295W MED8P38304 223 aa5.51□□□□□ -1.53
PCA1YBR295W RSC1P53236 928 aa5.5□□□□□ -1.53
PCA1YBR295W BRN1P38170 754 aa5.5□□□□□ -1.53
PCA1YBR295W ECM1P39715 212 aa5.5□□□□□ -1.53
PCA1YBR295W RPC82P32349 654 aa5.49□□□□□ -1.53
PCA1YBR295W LAM1P38851 1228 aa5.49□□□□□ -1.53
PCA1YBR295W ITC1P53125 1264 aa5.49□□□□□ -1.53
PCA1YBR295W VPS5Q92331 675 aa5.49□□□□□ -1.53
PCA1YBR295W ABP1P15891 592 aaKnown RBP5.49□□□□□ -1.53
PCA1YBR295W RAD51P25454 400 aa5.49□□□□□ -1.53
PCA1YBR295W RCF1Q03713 159 aa5.49□□□□□ -1.53
PCA1YBR295W CDC11P32458 415 aa5.48□□□□□ -1.53
PCA1YBR295W PIM1P36775 1133 aa5.48□□□□□ -1.53
PCA1YBR295W IMH1Q06704 911 aaKnown RBP5.47□□□□□ -1.53
PCA1YBR295W HSC82P15108 705 aaKnown RBP5.46□□□□□ -1.53
PCA1YBR295W HOS4P40480 1083 aa5.46□□□□□ -1.53
PCA1YBR295W ALD3P54114 506 aa5.46□□□□□ -1.54
PCA1YBR295W COG8Q04632 607 aa5.46□□□□□ -1.54
PCA1YBR295W PKH1Q03407 766 aa5.45□□□□□ -1.54
PCA1YBR295W NFI1Q12216 726 aa5.45□□□□□ -1.54
PCA1YBR295W RAD2P07276 1031 aa5.45□□□□□ -1.54
PCA1YBR295W PET111P08468 800 aa5.45□□□□□ -1.54
PCA1YBR295W GCD6P32501 712 aaKnown RBP5.45□□□□□ -1.54
PCA1YBR295W YMR124WP39523 943 aaKnown RBP5.45□□□□□ -1.54
PCA1YBR295W APL6P46682 809 aa5.45□□□□□ -1.54
PCA1YBR295W ERV41Q04651 352 aa5.45□□□□□ -1.54
PCA1YBR295W MDM38Q08179 573 aa5.45□□□□□ -1.54
PCA1YBR295W PSE1P32337 1089 aaKnown RBP5.44□□□□□ -1.54
PCA1YBR295W VID30P53076 958 aa5.44□□□□□ -1.54
PCA1YBR295W UBP10P53874 792 aaPredicted RBP5.44□□□□□ -1.54
PCA1YBR295W RRP15Q06511 250 aaPredicted RBP5.44□□□□□ -1.54
PCA1YBR295W CFT2Q12102 859 aaPredicted RBP5.44□□□□□ -1.54
PCA1YBR295W SEC20P28791 383 aa5.44□□□□□ -1.54
PCA1YBR295W TPM2P40414 161 aa5.44□□□□□ -1.54
PCA1YBR295W UTP13Q05946 817 aaKnown RBP5.44□□□□□ -1.54
PCA1YBR295W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PCA1YBR295W YVC1Q12324 675 aa5.44□□□□□ -1.54
PCA1YBR295W ZUO1P32527 433 aaKnown RBP5.43□□□□□ -1.54
PCA1YBR295W BRL1P38770 471 aa5.43□□□□□ -1.54
PCA1YBR295W NOP7P53261 605 aaKnown RBP5.43□□□□□ -1.54
PCA1YBR295W GLE1Q12315 538 aa5.43□□□□□ -1.54
PCA1YBR295W SIT1P39980 628 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms