RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeastyeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH1YBR283C YOR1P53049 1477 aa6.19□□□□□ -1.42
SSH1YBR283C TGL3P40308 642 aa6.17□□□□□ -1.42
SSH1YBR283C MMS22Q06164 1454 aa6.17□□□□□ -1.42
SSH1YBR283C SMC4Q12267 1418 aa6.16□□□□□ -1.42
SSH1YBR283C SPT21P35209 758 aa6.15□□□□□ -1.42
SSH1YBR283C TIF4632P39936 914 aaKnown RBP6.15□□□□□ -1.42
SSH1YBR283C RIM101P33400 625 aa6.15□□□□□ -1.43
SSH1YBR283C RPA190P10964 1664 aaKnown RBP6.15□□□□□ -1.43
SSH1YBR283C SPP41P38904 1435 aa6.13□□□□□ -1.43
SSH1YBR283C TRM732Q03496 1420 aa6.11□□□□□ -1.43
SSH1YBR283C MET5P47169 1442 aa6.09□□□□□ -1.44
SSH1YBR283C TY1B-JR2P47100 1755 aaKnown RBP6.08□□□□□ -1.44
SSH1YBR283C TY1B-ER2Q03619 1755 aa6.08□□□□□ -1.44
SSH1YBR283C TY1B-MR1Q04214 1755 aa6.08□□□□□ -1.44
SSH1YBR283C TY1B-MR2Q04670 1755 aaKnown RBP6.08□□□□□ -1.44
SSH1YBR283C TY1B-LR1Q12088 1755 aaKnown RBP6.08□□□□□ -1.44
SSH1YBR283C TY1B-NL1Q12112 1755 aa6.08□□□□□ -1.44
SSH1YBR283C TY1B-GR1Q12141 1755 aa6.08□□□□□ -1.44
SSH1YBR283C TY1B-BLQ12490 1755 aa6.08□□□□□ -1.44
SSH1YBR283C YTA7P40340 1379 aa6.08□□□□□ -1.44
SSH1YBR283C TSC11P40061 1430 aa6.07□□□□□ -1.44
SSH1YBR283C VTH1P40438 1549 aa6.07□□□□□ -1.44
SSH1YBR283C VTH2P40890 1549 aa6.07□□□□□ -1.44
SSH1YBR283C NTE1Q04958 1679 aa6.05□□□□□ -1.44
SSH1YBR283C MYO4P32492 1471 aa6.04□□□□□ -1.44
SSH1YBR283C NUP159P40477 1460 aa6.04□□□□□ -1.44
SSH1YBR283C PTP3P40048 928 aa6.04□□□□□ -1.44
SSH1YBR283C SAS10Q12136 610 aaPredicted RBP6.04□□□□□ -1.44
SSH1YBR283C YRF1-1P0CX20 1796 aa6.04□□□□□ -1.44
SSH1YBR283C YRF1-5P0CX21 1796 aa6.04□□□□□ -1.44
SSH1YBR283C YRF1-8P0CX22 1796 aa6.04□□□□□ -1.44
SSH1YBR283C RPO21P04050 1733 aaKnown RBP6.02□□□□□ -1.45
SSH1YBR283C SNQ2P32568 1501 aaKnown RBP6.01□□□□□ -1.45
SSH1YBR283C LTE1P07866 1435 aa5.99□□□□□ -1.45
SSH1YBR283C YKR023WP36119 530 aaKnown RBP5.99□□□□□ -1.45
SSH1YBR283C STH1P32597 1359 aa5.99□□□□□ -1.45
SSH1YBR283C SSP1P38871 571 aa5.98□□□□□ -1.45
SSH1YBR283C VPS15P22219 1454 aa5.98□□□□□ -1.45
SSH1YBR283C ITT1Q04638 464 aa5.97□□□□□ -1.45
SSH1YBR283C SNT2P53127 1403 aa5.96□□□□□ -1.45
SSH1YBR283C GEA2P39993 1459 aaKnown RBP5.96□□□□□ -1.45
SSH1YBR283C MLP2P40457 1679 aa5.96□□□□□ -1.46
SSH1YBR283C BNI1P41832 1953 aa5.96□□□□□ -1.46
SSH1YBR283C SLX5P32828 619 aaKnown RBP5.96□□□□□ -1.46
SSH1YBR283C RTT106P40161 455 aa5.96□□□□□ -1.46
SSH1YBR283C ULS1Q08562 1619 aa5.95□□□□□ -1.46
SSH1YBR283C PDR15Q04182 1529 aaKnown RBP5.95□□□□□ -1.46
SSH1YBR283C IFH1P39520 1085 aa5.95□□□□□ -1.46
SSH1YBR283C YBL029C-AQ3E756 94 aa5.95□□□□□ -1.46
SSH1YBR283C DMA1P38823 416 aa5.94□□□□□ -1.46
SSH1YBR283C SCY1P53009 804 aa5.94□□□□□ -1.46
SSH1YBR283C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
SSH1YBR283C YIL055CP40523 627 aaKnown RBP5.93□□□□□ -1.46
SSH1YBR283C SPO14P36126 1683 aa5.92□□□□□ -1.46
SSH1YBR283C OXP1P28273 1286 aa5.91□□□□□ -1.46
SSH1YBR283C MET10P39692 1035 aa5.91□□□□□ -1.46
SSH1YBR283C DRS2P39524 1355 aa5.9□□□□□ -1.47
SSH1YBR283C HOP09932 586 aa5.89□□□□□ -1.47
SSH1YBR283C MMS1Q06211 1407 aa5.89□□□□□ -1.47
SSH1YBR283C DCD1P06773 312 aa5.88□□□□□ -1.47
SSH1YBR283C RGA2Q06407 1009 aa5.88□□□□□ -1.47
SSH1YBR283C NUP157P40064 1391 aaKnown RBP5.88□□□□□ -1.47
SSH1YBR283C IRC20Q06554 1556 aa5.87□□□□□ -1.47
SSH1YBR283C YJL171CP46992 396 aa5.87□□□□□ -1.47
SSH1YBR283C TAF7Q05021 590 aa5.87□□□□□ -1.47
SSH1YBR283C YAH1Q12184 172 aaKnown RBP5.87□□□□□ -1.47
SSH1YBR283C TFC8Q12308 588 aa5.87□□□□□ -1.47
SSH1YBR283C NUP170P38181 1502 aa5.87□□□□□ -1.47
SSH1YBR283C PDR12Q02785 1511 aa5.86□□□□□ -1.47
SSH1YBR283C GDB1Q06625 1536 aa5.86□□□□□ -1.47
SSH1YBR283C GEA1P47102 1408 aaPredicted RBP5.85□□□□□ -1.47
SSH1YBR283C IKI3Q06706 1349 aaKnown RBP5.85□□□□□ -1.47
SSH1YBR283C NSR1P27476 414 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SSH1YBR283C TY3B-GQ99315 1547 aa5.83□□□□□ -1.48
SSH1YBR283C DOP1Q03921 1698 aa5.83□□□□□ -1.48
SSH1YBR283C PDR10P51533 1564 aa5.83□□□□□ -1.48
SSH1YBR283C ABP1P15891 592 aaKnown RBP5.83□□□□□ -1.48
SSH1YBR283C AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
SSH1YBR283C IQG1Q12280 1495 aa5.82□□□□□ -1.48
SSH1YBR283C BUD3P25558 1636 aa5.82□□□□□ -1.48
SSH1YBR283C YLR271WQ06152 274 aa5.81□□□□□ -1.48
SSH1YBR283C YBT1P32386 1661 aa5.8□□□□□ -1.48
SSH1YBR283C NOP2P40991 618 aaKnown RBP5.8□□□□□ -1.48
SSH1YBR283C CKB1P43639 278 aa5.8□□□□□ -1.48
SSH1YBR283C RSM7P47150 247 aa5.8□□□□□ -1.48
SSH1YBR283C DNF2Q12675 1612 aa5.79□□□□□ -1.48
SSH1YBR283C MGA2P40578 1113 aa5.77□□□□□ -1.49
SSH1YBR283C VNX1P42839 908 aa5.77□□□□□ -1.49
SSH1YBR283C ARO1P08566 1588 aaKnown RBP5.77□□□□□ -1.49
SSH1YBR283C MIF2P35201 549 aa5.77□□□□□ -1.49
SSH1YBR283C CAT8P39113 1433 aa5.76□□□□□ -1.49
SSH1YBR283C SSM4P40318 1319 aa5.74□□□□□ -1.49
SSH1YBR283C TRM3Q07527 1436 aa5.74□□□□□ -1.49
SSH1YBR283C YSP2Q06681 1438 aa5.73□□□□□ -1.49
SSH1YBR283C CHC1P22137 1653 aaKnown RBP5.72□□□□□ -1.49
SSH1YBR283C FKH1P40466 484 aa5.71□□□□□ -1.49
SSH1YBR283C SPP1Q03012 353 aa5.71□□□□□ -1.5
SSH1YBR283C SEC7P11075 2009 aaKnown RBP5.7□□□□□ -1.5
SSH1YBR283C BNR1P40450 1375 aa5.7□□□□□ -1.5
SSH1YBR283C MST1P07236 462 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms