RNA–Protein interactions for RNA: YBR269C

SDH8, Transcript of Protein required for assembly of succinate dehydrogenase, yeastyeast

Gene SDH8, Length 417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH8YBR269C TY1B-GR1Q12141 1755 aa13.08□□□□□ -0.32
SDH8YBR269C TY1B-BLQ12490 1755 aa13.08□□□□□ -0.32
SDH8YBR269C SMC4Q12267 1418 aa13.07□□□□□ -0.32
SDH8YBR269C NTE1Q04958 1679 aa13.07□□□□□ -0.32
SDH8YBR269C SPP41P38904 1435 aa13.06□□□□□ -0.32
SDH8YBR269C POL1P13382 1468 aa13.06□□□□□ -0.32
SDH8YBR269C RPO21P04050 1733 aaKnown RBP13.01□□□□□ -0.33
SDH8YBR269C YOR1P53049 1477 aa13□□□□□ -0.33
SDH8YBR269C TSC11P40061 1430 aa13□□□□□ -0.33
SDH8YBR269C VTH1P40438 1549 aa12.96□□□□□ -0.33
SDH8YBR269C VTH2P40890 1549 aa12.96□□□□□ -0.33
SDH8YBR269C NUP170P38181 1502 aa12.93□□□□□ -0.34
SDH8YBR269C SNT2P53127 1403 aa12.93□□□□□ -0.34
SDH8YBR269C YOR093CQ12275 1648 aa12.91□□□□□ -0.34
SDH8YBR269C MYO4P32492 1471 aa12.89□□□□□ -0.35
SDH8YBR269C SPO14P36126 1683 aa12.86□□□□□ -0.35
SDH8YBR269C STU1P38198 1513 aa12.84□□□□□ -0.35
SDH8YBR269C MET10P39692 1035 aa12.77□□□□□ -0.37
SDH8YBR269C TRM3Q07527 1436 aa12.76□□□□□ -0.37
SDH8YBR269C ULS1Q08562 1619 aa12.76□□□□□ -0.37
SDH8YBR269C SNQ2P32568 1501 aaKnown RBP12.75□□□□□ -0.37
SDH8YBR269C DOP1Q03921 1698 aa12.73□□□□□ -0.37
SDH8YBR269C PDR12Q02785 1511 aa12.73□□□□□ -0.37
SDH8YBR269C IQG1Q12280 1495 aa12.63□□□□□ -0.39
SDH8YBR269C STH1P32597 1359 aa12.62□□□□□ -0.39
SDH8YBR269C PDR10P51533 1564 aa12.6□□□□□ -0.39
SDH8YBR269C GDB1Q06625 1536 aa12.6□□□□□ -0.39
SDH8YBR269C BUD3P25558 1636 aa12.59□□□□□ -0.39
SDH8YBR269C YTA7P40340 1379 aa12.54□□□□□ -0.4
SDH8YBR269C PDR15Q04182 1529 aaKnown RBP12.52□□□□□ -0.41
SDH8YBR269C MLP2P40457 1679 aa12.51□□□□□ -0.41
SDH8YBR269C RTT106P40161 455 aa12.49□□□□□ -0.41
SDH8YBR269C DNF3Q12674 1656 aa12.48□□□□□ -0.41
SDH8YBR269C ARO1P08566 1588 aaKnown RBP12.47□□□□□ -0.41
SDH8YBR269C NUP157P40064 1391 aaKnown RBP12.46□□□□□ -0.41
SDH8YBR269C CHC1P22137 1653 aaKnown RBP12.45□□□□□ -0.42
SDH8YBR269C SEC7P11075 2009 aaKnown RBP12.32□□□□□ -0.44
SDH8YBR269C YAP3P38749 330 aa12.31□□□□□ -0.44
SDH8YBR269C TY3B-GQ99315 1547 aa12.27□□□□□ -0.44
SDH8YBR269C MAK10Q02197 733 aa12.24□□□□□ -0.45
SDH8YBR269C BNR1P40450 1375 aa12.19□□□□□ -0.46
SDH8YBR269C USO1P25386 1790 aa12.13□□□□□ -0.47
SDH8YBR269C CAT8P39113 1433 aa12.11□□□□□ -0.47
SDH8YBR269C URN1Q06525 465 aaKnown RBP12.09□□□□□ -0.47
SDH8YBR269C HAP1P0CE41 1502 aa12.09□□□□□ -0.47
SDH8YBR269C YSP2Q06681 1438 aa12.06□□□□□ -0.48
SDH8YBR269C YMR196WQ04336 1088 aa12.04□□□□□ -0.48
SDH8YBR269C TAF7Q05021 590 aa12.04□□□□□ -0.48
SDH8YBR269C TY1B-NL2Q99337 1749 aaKnown RBP12.03□□□□□ -0.48
SDH8YBR269C YBT1P32386 1661 aa11.97□□□□□ -0.49
SDH8YBR269C THI12P42883 340 aa11.93□□□□□ -0.5
SDH8YBR269C THI5P43534 340 aa11.93□□□□□ -0.5
SDH8YBR269C THI11P47183 340 aa11.93□□□□□ -0.5
SDH8YBR269C THI13Q07748 340 aa11.93□□□□□ -0.5
SDH8YBR269C NUP188P52593 1655 aaKnown RBP11.89□□□□□ -0.51
SDH8YBR269C YAH1Q12184 172 aaKnown RBP11.88□□□□□ -0.51
SDH8YBR269C IML1P47170 1584 aa11.88□□□□□ -0.51
SDH8YBR269C GEA1P47102 1408 aaPredicted RBP11.87□□□□□ -0.51
SDH8YBR269C GLN1P32288 370 aaKnown RBP11.87□□□□□ -0.51
SDH8YBR269C CKB1P43639 278 aa11.85□□□□□ -0.51
SDH8YBR269C IPL1P38991 367 aa11.84□□□□□ -0.51
SDH8YBR269C IFH1P39520 1085 aa11.83□□□□□ -0.52
SDH8YBR269C SAS10Q12136 610 aaPredicted RBP11.83□□□□□ -0.52
SDH8YBR269C VMR1P38735 1592 aa11.78□□□□□ -0.52
SDH8YBR269C YIL055CP40523 627 aaKnown RBP11.72□□□□□ -0.53
SDH8YBR269C SRB8P25648 1427 aa11.69□□□□□ -0.54
SDH8YBR269C PRI1P10363 409 aa11.65□□□□□ -0.54
SDH8YBR269C TYS1P36421 394 aaKnown RBP11.65□□□□□ -0.54
SDH8YBR269C PTP3P40048 928 aa11.62□□□□□ -0.55
SDH8YBR269C APP1P53933 587 aa11.59□□□□□ -0.55
SDH8YBR269C BCK1Q01389 1478 aa11.57□□□□□ -0.56
SDH8YBR269C YMR074CQ04773 145 aa11.57□□□□□ -0.56
SDH8YBR269C BUD21Q08492 214 aaPredicted RBP11.52□□□□□ -0.57
SDH8YBR269C CFT1Q06632 1357 aaKnown RBP11.5□□□□□ -0.57
SDH8YBR269C PDR5P33302 1511 aaKnown RBP11.49□□□□□ -0.57
SDH8YBR269C PDR11P40550 1411 aa11.48□□□□□ -0.57
SDH8YBR269C REB1P21538 810 aa11.4□□□□□ -0.58
SDH8YBR269C YNR029CP53729 429 aaKnown RBP11.37□□□□□ -0.59
SDH8YBR269C BUD31P25337 157 aaPredicted RBP11.35□□□□□ -0.59
SDH8YBR269C ENT1Q12518 454 aa11.35□□□□□ -0.59
SDH8YBR269C KRE5P22023 1365 aa11.35□□□□□ -0.59
SDH8YBR269C ENV9Q08651 330 aa11.33□□□□□ -0.6
SDH8YBR269C MRX12P47084 519 aa11.32□□□□□ -0.6
SDH8YBR269C RIA1P53893 1110 aa11.32□□□□□ -0.6
SDH8YBR269C IMH1Q06704 911 aaKnown RBP11.31□□□□□ -0.6
SDH8YBR269C YRF1-2P40105 1681 aa11.3□□□□□ -0.6
SDH8YBR269C GCN2P15442 1659 aa11.3□□□□□ -0.6
SDH8YBR269C SSA1P10591 642 aaKnown RBP11.23□□□□□ -0.61
SDH8YBR269C NUP192P47054 1683 aa11.22□□□□□ -0.61
SDH8YBR269C GTT3P39996 337 aa11.2□□□□□ -0.62
SDH8YBR269C RRP5Q05022 1729 aaKnown RBP11.2□□□□□ -0.62
SDH8YBR269C EDE1P34216 1381 aa11.18□□□□□ -0.62
SDH8YBR269C UBP1P25037 809 aa11.18□□□□□ -0.62
SDH8YBR269C TY3B-IQ7LHG5 1498 aaKnown RBP11.13□□□□□ -0.63
SDH8YBR269C YBL086CP38177 466 aa11.11□□□□□ -0.63
SDH8YBR269C UGA2P38067 497 aa11.1□□□□□ -0.63
SDH8YBR269C ALD4P46367 519 aaKnown RBP11.06□□□□□ -0.64
SDH8YBR269C RAV1P47104 1357 aa11.05□□□□□ -0.64
SDH8YBR269C CAB1Q04430 367 aa11.05□□□□□ -0.64
SDH8YBR269C PRP45P28004 379 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms