RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeastyeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCS60YBR222C OXP1P28273 1286 aa7.34□□□□□ -1.23
PCS60YBR222C BCH2P36122 765 aa7.34□□□□□ -1.23
PCS60YBR222C NOP53Q12080 455 aaKnown RBP7.34□□□□□ -1.24
PCS60YBR222C BUD21Q08492 214 aaPredicted RBP7.33□□□□□ -1.24
PCS60YBR222C ISW1P38144 1129 aa7.32□□□□□ -1.24
PCS60YBR222C NAB3P38996 802 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
PCS60YBR222C YIL055CP40523 627 aaKnown RBP7.32□□□□□ -1.24
PCS60YBR222C YTA7P40340 1379 aa7.32□□□□□ -1.24
PCS60YBR222C SSP1P38871 571 aa7.31□□□□□ -1.24
PCS60YBR222C YJR008WP47085 338 aa7.31□□□□□ -1.24
PCS60YBR222C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
PCS60YBR222C FAR11P53917 953 aa7.31□□□□□ -1.24
PCS60YBR222C ENP1P38333 483 aaKnown RBP7.3□□□□□ -1.24
PCS60YBR222C KIP3P53086 805 aaKnown RBP7.3□□□□□ -1.24
PCS60YBR222C TCB3Q03640 1545 aaKnown RBP7.3□□□□□ -1.24
PCS60YBR222C GEF1P37020 779 aa7.3□□□□□ -1.24
PCS60YBR222C PTP3P40048 928 aa7.3□□□□□ -1.24
PCS60YBR222C SLX5P32828 619 aaKnown RBP7.29□□□□□ -1.24
PCS60YBR222C TY1B-DR4Q07793 1604 aa7.29□□□□□ -1.24
PCS60YBR222C SSF1P38789 453 aaPredicted RBP7.27□□□□□ -1.25
PCS60YBR222C RNA1P11745 407 aaKnown RBP7.26□□□□□ -1.25
PCS60YBR222C SPT7P35177 1332 aa7.25□□□□□ -1.25
PCS60YBR222C PDR1P12383 1068 aa7.24□□□□□ -1.25
PCS60YBR222C SPC42P36094 363 aa7.24□□□□□ -1.25
PCS60YBR222C ZDS1P50111 915 aaKnown RBP7.24□□□□□ -1.25
PCS60YBR222C YMR196WQ04336 1088 aa7.24□□□□□ -1.25
PCS60YBR222C TY4A-JP47023 414 aa7.23□□□□□ -1.25
PCS60YBR222C TCB2P48231 1178 aa7.23□□□□□ -1.25
PCS60YBR222C SPA2P23201 1466 aaKnown RBP7.23□□□□□ -1.25
PCS60YBR222C RPT2P40327 437 aaKnown RBP7.23□□□□□ -1.25
PCS60YBR222C DOS2P54858 310 aa7.23□□□□□ -1.25
PCS60YBR222C TAF13P11747 167 aa7.22□□□□□ -1.25
PCS60YBR222C DAL5P15365 543 aa7.22□□□□□ -1.25
PCS60YBR222C CKB1P43639 278 aa7.22□□□□□ -1.25
PCS60YBR222C QCR6P00127 147 aa7.21□□□□□ -1.26
PCS60YBR222C AIM21P40563 679 aa7.21□□□□□ -1.26
PCS60YBR222C BRE1Q07457 700 aaKnown RBP7.21□□□□□ -1.26
PCS60YBR222C YAH1Q12184 172 aaKnown RBP7.21□□□□□ -1.26
PCS60YBR222C SLX8P40072 274 aa7.19□□□□□ -1.26
PCS60YBR222C BUD31P25337 157 aaPredicted RBP7.19□□□□□ -1.26
PCS60YBR222C SEC20P28791 383 aa7.18□□□□□ -1.26
PCS60YBR222C FUN12P39730 1002 aaKnown RBP7.18□□□□□ -1.26
PCS60YBR222C TGL3P40308 642 aa7.18□□□□□ -1.26
PCS60YBR222C EPS1P40557 701 aa7.18□□□□□ -1.26
PCS60YBR222C HOS4P40480 1083 aa7.17□□□□□ -1.26
PCS60YBR222C RAD2P07276 1031 aa7.16□□□□□ -1.26
PCS60YBR222C RIX1P38883 763 aaPredicted RBP7.16□□□□□ -1.26
PCS60YBR222C RSM7P47150 247 aa7.16□□□□□ -1.26
PCS60YBR222C PIL1P53252 339 aaKnown RBP7.16□□□□□ -1.26
PCS60YBR222C HSC82P15108 705 aaKnown RBP7.16□□□□□ -1.26
PCS60YBR222C GRX3Q03835 250 aa7.16□□□□□ -1.26
PCS60YBR222C GAL11P19659 1081 aa7.15□□□□□ -1.27
PCS60YBR222C BDF1P35817 686 aa7.15□□□□□ -1.27
PCS60YBR222C MET10P39692 1035 aa7.15□□□□□ -1.27
PCS60YBR222C YNL011CP53980 444 aa7.15□□□□□ -1.27
PCS60YBR222C CDC11P32458 415 aa7.14□□□□□ -1.27
PCS60YBR222C GIR2Q03768 265 aaPredicted RBP7.14□□□□□ -1.27
PCS60YBR222C FPR4Q06205 392 aaPredicted RBP7.14□□□□□ -1.27
PCS60YBR222C BBC1P47068 1157 aa7.12□□□□□ -1.27
PCS60YBR222C MEH1Q02205 184 aa7.12□□□□□ -1.27
PCS60YBR222C YSH1Q06224 779 aaPredicted RBP7.12□□□□□ -1.27
PCS60YBR222C PEA2P40091 420 aa7.1□□□□□ -1.27
PCS60YBR222C AI2P03876 854 aa7.09□□□□□ -1.27
PCS60YBR222C NSR1P27476 414 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
PCS60YBR222C MRX12P47084 519 aa7.09□□□□□ -1.27
PCS60YBR222C PSK2Q08217 1101 aa7.09□□□□□ -1.27
PCS60YBR222C MPE1P35728 441 aaKnown RBP7.09□□□□□ -1.28
PCS60YBR222C PAM1P37304 830 aaKnown RBP7.09□□□□□ -1.28
PCS60YBR222C YGR130CP53278 816 aa7.08□□□□□ -1.28
PCS60YBR222C UBX5Q06682 500 aa7.07□□□□□ -1.28
PCS60YBR222C ECM5Q03214 1411 aa7.06□□□□□ -1.28
PCS60YBR222C NMD2P38798 1089 aaKnown RBP7.06□□□□□ -1.28
PCS60YBR222C VPS4P52917 437 aa7.06□□□□□ -1.28
PCS60YBR222C PKH1Q03407 766 aa7.06□□□□□ -1.28
PCS60YBR222C CFT2Q12102 859 aaPredicted RBP7.06□□□□□ -1.28
PCS60YBR222C RPA135P22138 1203 aaKnown RBP7.05□□□□□ -1.28
PCS60YBR222C SPC110P32380 944 aa7.05□□□□□ -1.28
PCS60YBR222C SYH1Q02875 849 aaKnown RBP7.05□□□□□ -1.28
PCS60YBR222C YDR341CQ05506 607 aaKnown RBP7.05□□□□□ -1.28
PCS60YBR222C MCM1P11746 286 aa7.04□□□□□ -1.28
PCS60YBR222C SSA4P22202 642 aaKnown RBP7.04□□□□□ -1.28
PCS60YBR222C DJP1P40564 432 aa7.04□□□□□ -1.28
PCS60YBR222C MTR4P47047 1073 aaKnown RBP7.04□□□□□ -1.28
PCS60YBR222C RCF1Q03713 159 aa7.04□□□□□ -1.28
PCS60YBR222C YLR271WQ06152 274 aa7.04□□□□□ -1.28
PCS60YBR222C SPT6P23615 1451 aaKnown RBP7.03□□□□□ -1.28
PCS60YBR222C PET111P08468 800 aa7.03□□□□□ -1.28
PCS60YBR222C SEC9P40357 651 aa7.03□□□□□ -1.28
PCS60YBR222C YAF9P53930 226 aa7.03□□□□□ -1.28
PCS60YBR222C TOM20P35180 183 aa7.02□□□□□ -1.29
PCS60YBR222C NMD3P38861 518 aaKnown RBP7.02□□□□□ -1.29
PCS60YBR222C ERP2P39704 215 aa7.02□□□□□ -1.29
PCS60YBR222C MFT1P33441 392 aaKnown RBP7.01□□□□□ -1.29
PCS60YBR222C OCA5P38738 679 aa7.01□□□□□ -1.29
PCS60YBR222C NOC2P39744 710 aaKnown RBP7.01□□□□□ -1.29
PCS60YBR222C POL5P39985 1022 aaKnown RBP7.01□□□□□ -1.29
PCS60YBR222C YDL121CQ07541 149 aa7.01□□□□□ -1.29
PCS60YBR222C APL5Q08951 932 aaKnown RBP7.01□□□□□ -1.29
PCS60YBR222C BLI1P35727 113 aa7.01□□□□□ -1.29
PCS60YBR222C PMC1P38929 1173 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms