RNA–Protein interactions for RNA: YBR140C

IRA1, Transcript of GTPase-activating protein, yeastyeast

Gene IRA1, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRA1YBR140C YSP2Q06681 1438 aa2.41□□□□□ -2.02
IRA1YBR140C YRF1-4O13559 1382 aa2.41□□□□□ -2.02
IRA1YBR140C YML133CQ03099 1374 aa2.41□□□□□ -2.02
IRA1YBR140C YLL067CQ07888 1374 aa2.41□□□□□ -2.02
IRA1YBR140C YLL066CQ99208 1374 aa2.41□□□□□ -2.02
IRA1YBR140C YCF1P39109 1515 aaKnown RBP2.4□□□□□ -2.02
IRA1YBR140C RPO21P04050 1733 aaKnown RBP2.4□□□□□ -2.03
IRA1YBR140C YBT1P32386 1661 aa2.4□□□□□ -2.03
IRA1YBR140C YOR093CQ12275 1648 aa2.4□□□□□ -2.03
IRA1YBR140C TAF2P23255 1407 aa2.38□□□□□ -2.03
IRA1YBR140C GEA2P39993 1459 aaKnown RBP2.38□□□□□ -2.03
IRA1YBR140C SEC3P33332 1336 aaKnown RBP2.38□□□□□ -2.03
IRA1YBR140C ULS1Q08562 1619 aa2.38□□□□□ -2.03
IRA1YBR140C ARO1P08566 1588 aaKnown RBP2.38□□□□□ -2.03
IRA1YBR140C RQC2Q12532 1038 aaKnown RBP2.37□□□□□ -2.03
IRA1YBR140C IKI3Q06706 1349 aaKnown RBP2.37□□□□□ -2.03
IRA1YBR140C TRM3Q07527 1436 aa2.37□□□□□ -2.03
IRA1YBR140C YFR016CP43597 1233 aaKnown RBP2.37□□□□□ -2.03
IRA1YBR140C SNT2P53127 1403 aa2.37□□□□□ -2.03
IRA1YBR140C BPT1P14772 1559 aa2.37□□□□□ -2.03
IRA1YBR140C TY3B-IQ7LHG5 1498 aaKnown RBP2.37□□□□□ -2.03
IRA1YBR140C PAN1P32521 1480 aa2.36□□□□□ -2.03
IRA1YBR140C MLP1Q02455 1875 aaKnown RBP2.36□□□□□ -2.03
IRA1YBR140C MMS1Q06211 1407 aa2.36□□□□□ -2.03
IRA1YBR140C CHC1P22137 1653 aaKnown RBP2.36□□□□□ -2.03
IRA1YBR140C MET5P47169 1442 aa2.36□□□□□ -2.03
IRA1YBR140C BFR2Q06631 534 aaKnown RBP2.36□□□□□ -2.03
IRA1YBR140C NTE1Q04958 1679 aa2.36□□□□□ -2.03
IRA1YBR140C PDR15Q04182 1529 aaKnown RBP2.35□□□□□ -2.03
IRA1YBR140C SNF2P22082 1703 aa2.35□□□□□ -2.03
IRA1YBR140C APC1P53886 1748 aa2.35□□□□□ -2.03
IRA1YBR140C USO1P25386 1790 aa2.35□□□□□ -2.03
IRA1YBR140C DRS1P32892 752 aaKnown RBP2.35□□□□□ -2.03
IRA1YBR140C DNF1P32660 1571 aa2.35□□□□□ -2.03
IRA1YBR140C SNQ2P32568 1501 aaKnown RBP2.35□□□□□ -2.03
IRA1YBR140C GDB1Q06625 1536 aa2.34□□□□□ -2.03
IRA1YBR140C CFT1Q06632 1357 aaKnown RBP2.33□□□□□ -2.04
IRA1YBR140C DNF3Q12674 1656 aa2.33□□□□□ -2.04
IRA1YBR140C YLR419WQ06698 1435 aaKnown RBP2.32□□□□□ -2.04
IRA1YBR140C NUP188P52593 1655 aaKnown RBP2.32□□□□□ -2.04
IRA1YBR140C VPS15P22219 1454 aa2.32□□□□□ -2.04
IRA1YBR140C RPA190P10964 1664 aaKnown RBP2.32□□□□□ -2.04
IRA1YBR140C IML1P47170 1584 aa2.31□□□□□ -2.04
IRA1YBR140C STH1P32597 1359 aa2.31□□□□□ -2.04
IRA1YBR140C TRM732Q03496 1420 aa2.31□□□□□ -2.04
IRA1YBR140C VTH1P40438 1549 aa2.3□□□□□ -2.04
IRA1YBR140C VTH2P40890 1549 aa2.3□□□□□ -2.04
IRA1YBR140C DNF2Q12675 1612 aa2.3□□□□□ -2.04
IRA1YBR140C YRB30P53107 440 aaPredicted RBP2.29□□□□□ -2.04
IRA1YBR140C SRB8P25648 1427 aa2.29□□□□□ -2.04
IRA1YBR140C SPO14P36126 1683 aa2.29□□□□□ -2.04
IRA1YBR140C DOP1Q03921 1698 aa2.29□□□□□ -2.04
IRA1YBR140C MDS3P53094 1487 aa2.29□□□□□ -2.04
IRA1YBR140C URB1P34241 1764 aaKnown RBP2.29□□□□□ -2.04
IRA1YBR140C RRP5Q05022 1729 aaKnown RBP2.28□□□□□ -2.04
IRA1YBR140C TSC11P40061 1430 aa2.28□□□□□ -2.04
IRA1YBR140C TY1B-NL2Q99337 1749 aaKnown RBP2.28□□□□□ -2.04
IRA1YBR140C VMR1P38735 1592 aa2.25□□□□□ -2.05
IRA1YBR140C SPT7P35177 1332 aa2.24□□□□□ -2.05
IRA1YBR140C NUP192P47054 1683 aa2.24□□□□□ -2.05
IRA1YBR140C RPP0P05317 312 aaKnown RBP2.23□□□□□ -2.05
IRA1YBR140C LTE1P07866 1435 aa2.23□□□□□ -2.05
IRA1YBR140C UTP10P42945 1769 aaKnown RBP2.22□□□□□ -2.05
IRA1YBR140C YRF1-1P0CX20 1796 aa2.21□□□□□ -2.05
IRA1YBR140C YRF1-5P0CX21 1796 aa2.21□□□□□ -2.05
IRA1YBR140C YRF1-8P0CX22 1796 aa2.21□□□□□ -2.05
IRA1YBR140C ABP1P15891 592 aaKnown RBP2.21□□□□□ -2.06
IRA1YBR140C ENP1P38333 483 aaKnown RBP2.21□□□□□ -2.06
IRA1YBR140C IFH1P39520 1085 aa2.21□□□□□ -2.06
IRA1YBR140C EDE1P34216 1381 aa2.21□□□□□ -2.06
IRA1YBR140C SIR4P11978 1358 aa2.2□□□□□ -2.06
IRA1YBR140C MHP1P43638 1398 aa2.2□□□□□ -2.06
IRA1YBR140C RIM15P43565 1770 aa2.2□□□□□ -2.06
IRA1YBR140C RKM3P38222 552 aa2.19□□□□□ -2.06
IRA1YBR140C YRF1-2P40105 1681 aa2.18□□□□□ -2.06
IRA1YBR140C SIS2P36024 562 aa2.18□□□□□ -2.06
IRA1YBR140C CHZ1P40019 153 aaPredicted RBP2.18□□□□□ -2.06
IRA1YBR140C RAV1P47104 1357 aa2.18□□□□□ -2.06
IRA1YBR140C ORC1P54784 914 aaPredicted RBP2.17□□□□□ -2.06
IRA1YBR140C AVT3P36062 692 aa2.16□□□□□ -2.06
IRA1YBR140C CAB3P36076 571 aa2.16□□□□□ -2.06
IRA1YBR140C YIR014WP40570 242 aa2.15□□□□□ -2.07
IRA1YBR140C RLF2Q12495 606 aa2.15□□□□□ -2.07
IRA1YBR140C LYS2P07702 1392 aa2.14□□□□□ -2.07
IRA1YBR140C YIL177CP40434 1758 aa2.14□□□□□ -2.07
IRA1YBR140C YJL225CP40889 1758 aa2.14□□□□□ -2.07
IRA1YBR140C BCK1Q01389 1478 aa2.13□□□□□ -2.07
IRA1YBR140C RTC1Q08281 1341 aa2.13□□□□□ -2.07
IRA1YBR140C ROM2P51862 1356 aaKnown RBP2.13□□□□□ -2.07
IRA1YBR140C RIX1P38883 763 aaPredicted RBP2.13□□□□□ -2.07
IRA1YBR140C FAS2P19097 1887 aaKnown RBP2.11□□□□□ -2.07
IRA1YBR140C KRI1P42846 591 aaKnown RBP2.11□□□□□ -2.07
IRA1YBR140C PSK1P31374 1356 aa2.11□□□□□ -2.07
IRA1YBR140C AUS1Q08409 1394 aa2.1□□□□□ -2.07
IRA1YBR140C HGH1P48362 394 aaKnown RBP2.1□□□□□ -2.07
IRA1YBR140C YPR148CQ06523 435 aa2.1□□□□□ -2.07
IRA1YBR140C PDR11P40550 1411 aa2.1□□□□□ -2.07
IRA1YBR140C SPT2P06843 333 aaPredicted RBP2.1□□□□□ -2.07
IRA1YBR140C FKS3Q04952 1785 aa2.09□□□□□ -2.07
IRA1YBR140C RPL22AP05749 121 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms