RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YOR238WQ08634 303 aa3.76□□□□□ -1.81
PRP6YBR055C SSA1P10591 642 aaKnown RBP3.75□□□□□ -1.81
PRP6YBR055C GEF1P37020 779 aa3.74□□□□□ -1.81
PRP6YBR055C YJL007CP47080 104 aa3.74□□□□□ -1.81
PRP6YBR055C KIC1P38692 1080 aa3.74□□□□□ -1.81
PRP6YBR055C BIM1P40013 344 aa3.74□□□□□ -1.81
PRP6YBR055C YDR090CQ03193 310 aa3.74□□□□□ -1.81
PRP6YBR055C SUB2Q07478 446 aaKnown RBP3.74□□□□□ -1.81
PRP6YBR055C SSA2P10592 639 aaKnown RBP3.73□□□□□ -1.81
PRP6YBR055C UBP14P38237 781 aaKnown RBP3.73□□□□□ -1.81
PRP6YBR055C SLX8P40072 274 aa3.73□□□□□ -1.81
PRP6YBR055C CSN12P47130 423 aa3.73□□□□□ -1.81
PRP6YBR055C PIB1Q06651 286 aa3.73□□□□□ -1.81
PRP6YBR055C YLR326WQ06170 240 aaKnown RBP3.72□□□□□ -1.81
PRP6YBR055C ATG32P40458 529 aa3.72□□□□□ -1.81
PRP6YBR055C ATH1P48016 1211 aa3.72□□□□□ -1.81
PRP6YBR055C NOP8Q08287 484 aaPredicted RBP3.72□□□□□ -1.81
PRP6YBR055C GLN1P32288 370 aaKnown RBP3.71□□□□□ -1.82
PRP6YBR055C RPL34BP40525 121 aaKnown RBP3.71□□□□□ -1.82
PRP6YBR055C PSE1P32337 1089 aaKnown RBP3.7□□□□□ -1.82
PRP6YBR055C RAD54P32863 898 aa3.7□□□□□ -1.82
PRP6YBR055C GRE2Q12068 342 aaKnown RBP3.69□□□□□ -1.82
PRP6YBR055C ERG12P07277 443 aa3.69□□□□□ -1.82
PRP6YBR055C VMA1P17255 1071 aaKnown RBP3.69□□□□□ -1.82
PRP6YBR055C SSA4P22202 642 aaKnown RBP3.69□□□□□ -1.82
PRP6YBR055C GUT1P32190 709 aa3.68□□□□□ -1.82
PRP6YBR055C TYW1Q08960 810 aaKnown RBP3.68□□□□□ -1.82
PRP6YBR055C TEA1P47988 759 aa3.68□□□□□ -1.82
PRP6YBR055C YGR273CP53329 174 aa3.68□□□□□ -1.82
PRP6YBR055C TIF1P10081 395 aaKnown RBP3.67□□□□□ -1.82
PRP6YBR055C CPS1P27614 576 aa3.67□□□□□ -1.82
PRP6YBR055C KTR1P27810 393 aaKnown RBP3.67□□□□□ -1.82
PRP6YBR055C PCS60P38137 543 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
PRP6YBR055C YBL036CP38197 257 aa3.67□□□□□ -1.82
PRP6YBR055C YPR204WQ08995 1032 aa3.67□□□□□ -1.82
PRP6YBR055C KEX1P09620 729 aa3.67□□□□□ -1.82
PRP6YBR055C AIM44Q99299 758 aa3.67□□□□□ -1.82
PRP6YBR055C YGL015CP33199 130 aa3.66□□□□□ -1.82
PRP6YBR055C BIO2P32451 375 aa3.65□□□□□ -1.82
PRP6YBR055C YAP5P40574 245 aa3.65□□□□□ -1.82
PRP6YBR055C RPL34AP87262 121 aaPredicted RBP3.65□□□□□ -1.82
PRP6YBR055C ORC6P38826 435 aa3.65□□□□□ -1.83
PRP6YBR055C RTG2P32608 588 aaKnown RBP3.64□□□□□ -1.83
PRP6YBR055C SOL3P38858 249 aa3.64□□□□□ -1.83
PRP6YBR055C TTI1P36097 1038 aa3.64□□□□□ -1.83
PRP6YBR055C YNL108CP53929 270 aa3.64□□□□□ -1.83
PRP6YBR055C NSR1P27476 414 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PRP6YBR055C PKH3Q03306 898 aaPredicted RBP3.63□□□□□ -1.83
PRP6YBR055C YMR196WQ04336 1088 aa3.63□□□□□ -1.83
PRP6YBR055C GYP5Q12344 894 aa3.63□□□□□ -1.83
PRP6YBR055C SLD2P34252 453 aa3.63□□□□□ -1.83
PRP6YBR055C RGR1P19263 1082 aa3.62□□□□□ -1.83
PRP6YBR055C TIF4632P39936 914 aaKnown RBP3.62□□□□□ -1.83
PRP6YBR055C NOB1Q08444 459 aaKnown RBP3.62□□□□□ -1.83
PRP6YBR055C RAD59Q12223 238 aa3.62□□□□□ -1.83
PRP6YBR055C ESS1P22696 170 aa3.61□□□□□ -1.83
PRP6YBR055C CLB5P30283 435 aa3.61□□□□□ -1.83
PRP6YBR055C CDC3P32457 520 aaKnown RBP3.61□□□□□ -1.83
PRP6YBR055C MRX12P47084 519 aa3.61□□□□□ -1.83
PRP6YBR055C NOP7P53261 605 aaKnown RBP3.61□□□□□ -1.83
PRP6YBR055C NIS1P53939 407 aa3.61□□□□□ -1.83
PRP6YBR055C SAM3Q08986 587 aa3.61□□□□□ -1.83
PRP6YBR055C DCW1P36091 449 aa3.61□□□□□ -1.83
PRP6YBR055C FPK1P53739 893 aa3.61□□□□□ -1.83
PRP6YBR055C MMP1Q12372 583 aa3.61□□□□□ -1.83
PRP6YBR055C SCJ1P25303 377 aa3.6□□□□□ -1.83
PRP6YBR055C HST2P53686 357 aa3.6□□□□□ -1.83
PRP6YBR055C ORC1P54784 914 aaPredicted RBP3.6□□□□□ -1.83
PRP6YBR055C MVP1P40959 511 aaKnown RBP3.6□□□□□ -1.83
PRP6YBR055C YML083CQ04526 418 aa3.6□□□□□ -1.83
PRP6YBR055C YJU3P28321 313 aa3.59□□□□□ -1.83
PRP6YBR055C CSE4P36012 229 aa3.59□□□□□ -1.83
PRP6YBR055C YPR109WQ06104 294 aa3.59□□□□□ -1.83
PRP6YBR055C ARG8P18544 423 aa3.58□□□□□ -1.84
PRP6YBR055C SSF1P38789 453 aaPredicted RBP3.58□□□□□ -1.84
PRP6YBR055C ILV3P39522 585 aaKnown RBP3.58□□□□□ -1.84
PRP6YBR055C ENO1P00924 437 aaKnown RBP3.58□□□□□ -1.84
PRP6YBR055C GTT3P39996 337 aa3.58□□□□□ -1.84
PRP6YBR055C ENO2P00925 437 aaKnown RBP3.57□□□□□ -1.84
PRP6YBR055C SNU71P53207 620 aaKnown RBP3.57□□□□□ -1.84
PRP6YBR055C NST1P53935 1240 aa3.57□□□□□ -1.84
PRP6YBR055C HAT1Q12341 374 aa3.57□□□□□ -1.84
PRP6YBR055C SUP45P12385 437 aaKnown RBP3.57□□□□□ -1.84
PRP6YBR055C PUP1P25043 261 aa3.57□□□□□ -1.84
PRP6YBR055C MPH3P0CE00 602 aa3.57□□□□□ -1.84
PRP6YBR055C YDJ1P25491 409 aaKnown RBP3.57□□□□□ -1.84
PRP6YBR055C TGL3P40308 642 aa3.57□□□□□ -1.84
PRP6YBR055C CSC1Q06538 782 aa3.57□□□□□ -1.84
PRP6YBR055C AI4P03878 556 aa3.56□□□□□ -1.84
PRP6YBR055C HTA1P04911 132 aaKnown RBP3.56□□□□□ -1.84
PRP6YBR055C HTA2P04912 132 aa3.56□□□□□ -1.84
PRP6YBR055C RPP1BP10622 106 aaKnown RBP3.56□□□□□ -1.84
PRP6YBR055C GAP1P19145 602 aaPredicted RBP3.56□□□□□ -1.84
PRP6YBR055C SET4P42948 560 aa3.56□□□□□ -1.84
PRP6YBR055C YOL036WQ08206 761 aa3.56□□□□□ -1.84
PRP6YBR055C SIS2P36024 562 aa3.55□□□□□ -1.84
PRP6YBR055C SPT5P27692 1063 aaKnown RBP3.55□□□□□ -1.84
PRP6YBR055C RRN6P32786 894 aa3.55□□□□□ -1.84
PRP6YBR055C SLI15P38283 698 aa3.55□□□□□ -1.84
PRP6YBR055C SEN54Q02825 467 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms