RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W TY1B-OLQ12273 1755 aa1.96□□□□□ -2.1
UTP20YBL004W TY1B-PLQ12414 1755 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W ARO1P08566 1588 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W CHC1P22137 1653 aaKnown RBP1.96□□□□□ -2.1
UTP20YBL004W SMC4Q12267 1418 aa1.95□□□□□ -2.1
UTP20YBL004W PRI1P10363 409 aa1.94□□□□□ -2.1
UTP20YBL004W YMR196WQ04336 1088 aa1.93□□□□□ -2.1
UTP20YBL004W ULS1Q08562 1619 aa1.93□□□□□ -2.1
UTP20YBL004W SSA1P10591 642 aaKnown RBP1.93□□□□□ -2.1
UTP20YBL004W TY2B-LR1P0C2J3 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-FP0CX63 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-GR2P0CX64 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-CP25384 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-DR2Q03494 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY1B-DR1Q03855 1755 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-DR3Q07791 1770 aaKnown RBP1.92□□□□□ -2.1
UTP20YBL004W TY2B-OR1Q12113 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-DR1Q12472 1770 aa1.92□□□□□ -2.1
UTP20YBL004W TY2B-OR2Q12501 1770 aa1.92□□□□□ -2.1
UTP20YBL004W IQG1Q12280 1495 aa1.92□□□□□ -2.1
UTP20YBL004W YRF1-2P40105 1681 aa1.92□□□□□ -2.1
UTP20YBL004W VMR1P38735 1592 aa1.92□□□□□ -2.1
UTP20YBL004W BNR1P40450 1375 aa1.91□□□□□ -2.1
UTP20YBL004W GLN1P32288 370 aaKnown RBP1.91□□□□□ -2.1
UTP20YBL004W SPP41P38904 1435 aa1.91□□□□□ -2.1
UTP20YBL004W YOR1P53049 1477 aa1.9□□□□□ -2.11
UTP20YBL004W POL1P13382 1468 aa1.9□□□□□ -2.11
UTP20YBL004W TY2B-BQ12491 1770 aa1.89□□□□□ -2.11
UTP20YBL004W POM152P39685 1337 aa1.88□□□□□ -2.11
UTP20YBL004W YMR074CQ04773 145 aa1.88□□□□□ -2.11
UTP20YBL004W TY1B-JR2P47100 1755 aaKnown RBP1.88□□□□□ -2.11
UTP20YBL004W TY1B-ER2Q03619 1755 aa1.88□□□□□ -2.11
UTP20YBL004W TY1B-MR1Q04214 1755 aa1.88□□□□□ -2.11
UTP20YBL004W TY1B-MR2Q04670 1755 aaKnown RBP1.88□□□□□ -2.11
UTP20YBL004W TY1B-LR1Q12088 1755 aaKnown RBP1.88□□□□□ -2.11
UTP20YBL004W TY1B-NL1Q12112 1755 aa1.88□□□□□ -2.11
UTP20YBL004W TY1B-GR1Q12141 1755 aa1.88□□□□□ -2.11
UTP20YBL004W TY1B-BLQ12490 1755 aa1.88□□□□□ -2.11
UTP20YBL004W YLL066CQ99208 1374 aa1.87□□□□□ -2.11
UTP20YBL004W VTH1P40438 1549 aa1.87□□□□□ -2.11
UTP20YBL004W VTH2P40890 1549 aa1.87□□□□□ -2.11
UTP20YBL004W TSC11P40061 1430 aa1.87□□□□□ -2.11
UTP20YBL004W CAT8P39113 1433 aa1.86□□□□□ -2.11
UTP20YBL004W PDR10P51533 1564 aa1.86□□□□□ -2.11
UTP20YBL004W RPS9BP05755 195 aaKnown RBP1.86□□□□□ -2.11
UTP20YBL004W TY1B-DR3Q99231 1755 aa1.85□□□□□ -2.11
UTP20YBL004W SNQ2P32568 1501 aaKnown RBP1.85□□□□□ -2.11
UTP20YBL004W CFT1Q06632 1357 aaKnown RBP1.85□□□□□ -2.11
UTP20YBL004W MLP2P40457 1679 aa1.85□□□□□ -2.11
UTP20YBL004W URN1Q06525 465 aaKnown RBP1.85□□□□□ -2.11
UTP20YBL004W SKI3P17883 1432 aaKnown RBP1.84□□□□□ -2.11
UTP20YBL004W NUP188P52593 1655 aaKnown RBP1.83□□□□□ -2.12
UTP20YBL004W ENV9Q08651 330 aa1.83□□□□□ -2.12
UTP20YBL004W YBT1P32386 1661 aa1.83□□□□□ -2.12
UTP20YBL004W RRD1P40454 393 aaKnown RBP1.83□□□□□ -2.12
UTP20YBL004W NUP157P40064 1391 aaKnown RBP1.81□□□□□ -2.12
UTP20YBL004W PDR5P33302 1511 aaKnown RBP1.81□□□□□ -2.12
UTP20YBL004W YIL055CP40523 627 aaKnown RBP1.8□□□□□ -2.12
UTP20YBL004W MAK10Q02197 733 aa1.8□□□□□ -2.12
UTP20YBL004W YTA7P40340 1379 aa1.8□□□□□ -2.12
UTP20YBL004W RSF2P46974 1380 aa1.79□□□□□ -2.12
UTP20YBL004W SNF2P22082 1703 aa1.79□□□□□ -2.12
UTP20YBL004W STH1P32597 1359 aa1.79□□□□□ -2.12
UTP20YBL004W MET10P39692 1035 aa1.79□□□□□ -2.12
UTP20YBL004W GEA1P47102 1408 aaPredicted RBP1.78□□□□□ -2.12
UTP20YBL004W USO1P25386 1790 aa1.78□□□□□ -2.12
UTP20YBL004W DUS1P53759 423 aaKnown RBP1.78□□□□□ -2.12
UTP20YBL004W YAP3P38749 330 aa1.77□□□□□ -2.13
UTP20YBL004W SRB8P25648 1427 aa1.77□□□□□ -2.13
UTP20YBL004W UBP1P25037 809 aa1.76□□□□□ -2.13
UTP20YBL004W PTP3P40048 928 aa1.76□□□□□ -2.13
UTP20YBL004W PEX21P50091 288 aa1.76□□□□□ -2.13
UTP20YBL004W SRF1Q12516 437 aa1.75□□□□□ -2.13
UTP20YBL004W PUS5Q06244 254 aa1.75□□□□□ -2.13
UTP20YBL004W SPT7P35177 1332 aa1.75□□□□□ -2.13
UTP20YBL004W EAR1Q03212 550 aa1.74□□□□□ -2.13
UTP20YBL004W MAC1P35192 417 aa1.74□□□□□ -2.13
UTP20YBL004W YSP2Q06681 1438 aa1.74□□□□□ -2.13
UTP20YBL004W GCN2P15442 1659 aa1.74□□□□□ -2.13
UTP20YBL004W PDR11P40550 1411 aa1.74□□□□□ -2.13
UTP20YBL004W UGA2P38067 497 aa1.72□□□□□ -2.13
UTP20YBL004W YKR023WP36119 530 aaKnown RBP1.71□□□□□ -2.14
UTP20YBL004W BUD31P25337 157 aaPredicted RBP1.71□□□□□ -2.14
UTP20YBL004W TYW1Q08960 810 aaKnown RBP1.71□□□□□ -2.14
UTP20YBL004W SEC7P11075 2009 aaKnown RBP1.7□□□□□ -2.14
UTP20YBL004W YEF3P16521 1044 aaKnown RBP1.69□□□□□ -2.14
UTP20YBL004W TY3B-IQ7LHG5 1498 aaKnown RBP1.69□□□□□ -2.14
UTP20YBL004W ROM2P51862 1356 aaKnown RBP1.68□□□□□ -2.14
UTP20YBL004W ALD2P47771 506 aa1.68□□□□□ -2.14
UTP20YBL004W YNR014WP53719 212 aa1.67□□□□□ -2.14
UTP20YBL004W YLR419WQ06698 1435 aaKnown RBP1.67□□□□□ -2.14
UTP20YBL004W DRS1P32892 752 aaKnown RBP1.66□□□□□ -2.14
UTP20YBL004W THI12P42883 340 aa1.65□□□□□ -2.15
UTP20YBL004W THI5P43534 340 aa1.65□□□□□ -2.15
UTP20YBL004W THI11P47183 340 aa1.65□□□□□ -2.15
UTP20YBL004W THI13Q07748 340 aa1.65□□□□□ -2.15
UTP20YBL004W RRP5Q05022 1729 aaKnown RBP1.65□□□□□ -2.15
UTP20YBL004W MDN1Q12019 4910 aaKnown RBP1.65□□□□□ -2.15
UTP20YBL004W GLC3P32775 704 aa1.64□□□□□ -2.15
UTP20YBL004W SDH2P21801 266 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms