RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C RTT106P40161 455 aa7.34□□□□□ -1.23
RFA1YAR007C TAF7Q05021 590 aa7.33□□□□□ -1.24
RFA1YAR007C SEC3P33332 1336 aaKnown RBP7.33□□□□□ -1.24
RFA1YAR007C PDR10P51533 1564 aa7.32□□□□□ -1.24
RFA1YAR007C PAN1P32521 1480 aa7.32□□□□□ -1.24
RFA1YAR007C PSD2P53037 1138 aaKnown RBP7.32□□□□□ -1.24
RFA1YAR007C YBL029C-AQ3E756 94 aa7.32□□□□□ -1.24
RFA1YAR007C SMC4Q12267 1418 aa7.31□□□□□ -1.24
RFA1YAR007C YAP5P40574 245 aa7.3□□□□□ -1.24
RFA1YAR007C YCF1P39109 1515 aaKnown RBP7.29□□□□□ -1.24
RFA1YAR007C PRS1P32895 427 aaKnown RBP7.29□□□□□ -1.24
RFA1YAR007C CAB3P36076 571 aa7.28□□□□□ -1.24
RFA1YAR007C IFH1P39520 1085 aa7.28□□□□□ -1.24
RFA1YAR007C GEA1P47102 1408 aaPredicted RBP7.28□□□□□ -1.24
RFA1YAR007C PDR15Q04182 1529 aaKnown RBP7.28□□□□□ -1.24
RFA1YAR007C TSC11P40061 1430 aa7.28□□□□□ -1.24
RFA1YAR007C SSP1P38871 571 aa7.28□□□□□ -1.24
RFA1YAR007C EBP2P36049 427 aaKnown RBP7.27□□□□□ -1.25
RFA1YAR007C KOG1P38873 1557 aa7.27□□□□□ -1.25
RFA1YAR007C YPR148CQ06523 435 aa7.26□□□□□ -1.25
RFA1YAR007C TOP2P06786 1428 aaKnown RBP7.25□□□□□ -1.25
RFA1YAR007C RPO31P04051 1460 aa7.24□□□□□ -1.25
RFA1YAR007C VNX1P42839 908 aa7.24□□□□□ -1.25
RFA1YAR007C TY1B-DR3Q99231 1755 aa7.23□□□□□ -1.25
RFA1YAR007C PEP1P32319 1579 aa7.23□□□□□ -1.25
RFA1YAR007C ULS1Q08562 1619 aa7.23□□□□□ -1.25
RFA1YAR007C MRM1P25270 412 aa7.22□□□□□ -1.25
RFA1YAR007C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
RFA1YAR007C LEU3P08638 886 aa7.21□□□□□ -1.26
RFA1YAR007C TY2B-LR1P0C2J3 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-FP0CX63 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-GR2P0CX64 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-CP25384 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-DR2Q03494 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY1B-DR1Q03855 1755 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-DR3Q07791 1770 aaKnown RBP7.2□□□□□ -1.26
RFA1YAR007C TY2B-OR1Q12113 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-DR1Q12472 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY2B-OR2Q12501 1770 aa7.2□□□□□ -1.26
RFA1YAR007C TY3B-GQ99315 1547 aa7.2□□□□□ -1.26
RFA1YAR007C WSC3Q12215 556 aa7.19□□□□□ -1.26
RFA1YAR007C CST9Q06032 482 aa7.17□□□□□ -1.26
RFA1YAR007C SRB8P25648 1427 aa7.16□□□□□ -1.26
RFA1YAR007C TY2B-BQ12491 1770 aa7.16□□□□□ -1.26
RFA1YAR007C PIB1Q06651 286 aa7.16□□□□□ -1.26
RFA1YAR007C SPP1Q03012 353 aa7.15□□□□□ -1.26
RFA1YAR007C VPS15P22219 1454 aa7.15□□□□□ -1.26
RFA1YAR007C CFT1Q06632 1357 aaKnown RBP7.14□□□□□ -1.27
RFA1YAR007C DNF1P32660 1571 aa7.14□□□□□ -1.27
RFA1YAR007C YLR419WQ06698 1435 aaKnown RBP7.14□□□□□ -1.27
RFA1YAR007C GTT3P39996 337 aa7.13□□□□□ -1.27
RFA1YAR007C NUP159P40477 1460 aa7.12□□□□□ -1.27
RFA1YAR007C YBT1P32386 1661 aa7.12□□□□□ -1.27
RFA1YAR007C MGA2P40578 1113 aa7.11□□□□□ -1.27
RFA1YAR007C ESC1Q03661 1658 aaKnown RBP7.1□□□□□ -1.27
RFA1YAR007C MDS3P53094 1487 aa7.09□□□□□ -1.27
RFA1YAR007C IME2P32581 645 aa7.08□□□□□ -1.28
RFA1YAR007C TIF11P38912 153 aaKnown RBP7.08□□□□□ -1.28
RFA1YAR007C MHP1P43638 1398 aa7.07□□□□□ -1.28
RFA1YAR007C VPS29P38759 282 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-HO13535 1793 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-DR5P0C2I2 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-DR6P0C2I3 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-LR2P0C2I5 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-LR3P0C2I6 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C TY1B-PR1P0C2I9 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C TY1B-PR2P0C2J0 1756 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-PR3P0C2J1 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C TY1B-JR1P47098 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-ML2Q03434 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C TY1B-ER1Q03612 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-ML1Q04711 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C TY1B-GR2Q12269 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-OLQ12273 1755 aa7.07□□□□□ -1.28
RFA1YAR007C TY1B-PLQ12414 1755 aaKnown RBP7.07□□□□□ -1.28
RFA1YAR007C CLC1P17891 233 aa7.04□□□□□ -1.28
RFA1YAR007C RTG3P38165 486 aa7.04□□□□□ -1.28
RFA1YAR007C FUN12P39730 1002 aaKnown RBP7.04□□□□□ -1.28
RFA1YAR007C YMR1P47147 688 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RFA1YAR007C GCN2P15442 1659 aa7.04□□□□□ -1.28
RFA1YAR007C VTH1P40438 1549 aa7.04□□□□□ -1.28
RFA1YAR007C VTH2P40890 1549 aa7.04□□□□□ -1.28
RFA1YAR007C YFR016CP43597 1233 aaKnown RBP7.04□□□□□ -1.28
RFA1YAR007C ORC1P54784 914 aaPredicted RBP7.04□□□□□ -1.28
RFA1YAR007C RPC31P17890 251 aa7.02□□□□□ -1.28
RFA1YAR007C DBP1P24784 617 aaKnown RBP7.02□□□□□ -1.28
RFA1YAR007C OPY1P38271 328 aa7.02□□□□□ -1.28
RFA1YAR007C TY1B-BRQ12193 1756 aa7.02□□□□□ -1.29
RFA1YAR007C TY1B-GR3Q12316 1755 aa7.02□□□□□ -1.29
RFA1YAR007C TY1B-ORQ92393 1755 aa7.02□□□□□ -1.29
RFA1YAR007C RCR1P38212 213 aa7.02□□□□□ -1.29
RFA1YAR007C YFR006WP43590 535 aa7.02□□□□□ -1.29
RFA1YAR007C SNT2P53127 1403 aa7.02□□□□□ -1.29
RFA1YAR007C AIR2Q12476 344 aaKnown RBP7.01□□□□□ -1.29
RFA1YAR007C STS1P38637 319 aa7□□□□□ -1.29
RFA1YAR007C ULI1P43604 169 aa7□□□□□ -1.29
RFA1YAR007C NOP7P53261 605 aaKnown RBP7□□□□□ -1.29
RFA1YAR007C IOC2Q12072 812 aa7□□□□□ -1.29
RFA1YAR007C IRC20Q06554 1556 aa7□□□□□ -1.29
RFA1YAR007C FKH1P40466 484 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms