RNA–Protein interactions for RNA: ENST00000642127.1

HCCAT5-202, hepatocellular carcinoma associated transcript 5, humanhuman

BASIC

Gene HCCAT5, Length 1,029 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-202ENST00000642127 WDR62O43379 1518 aa15.39■□□□□ 0.05
HCCAT5-202ENST00000642127 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
HCCAT5-202ENST00000642127 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
HCCAT5-202ENST00000642127 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
HCCAT5-202ENST00000642127 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
HCCAT5-202ENST00000642127 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
HCCAT5-202ENST00000642127 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
HCCAT5-202ENST00000642127 EVX2Q03828 476 aa15.31■□□□□ 0.04
HCCAT5-202ENST00000642127 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
HCCAT5-202ENST00000642127 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
HCCAT5-202ENST00000642127 CFTRP13569 1480 aa15.3■□□□□ 0.04
HCCAT5-202ENST00000642127 FKBP8Q14318 412 aa15.3■□□□□ 0.04
HCCAT5-202ENST00000642127 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
HCCAT5-202ENST00000642127 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
HCCAT5-202ENST00000642127 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
HCCAT5-202ENST00000642127 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
HCCAT5-202ENST00000642127 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
HCCAT5-202ENST00000642127 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
HCCAT5-202ENST00000642127 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
HCCAT5-202ENST00000642127 TOPBP1Q92547 1522 aa15.07■□□□□ 0
HCCAT5-202ENST00000642127 IFT140Q96RY7 1462 aa15.06■□□□□ 0
HCCAT5-202ENST00000642127 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
HCCAT5-202ENST00000642127 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
HCCAT5-202ENST00000642127 EIF4G3O43432 1585 aaKnown RBP15.02□□□□□ -0.01
HCCAT5-202ENST00000642127 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
HCCAT5-202ENST00000642127 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
HCCAT5-202ENST00000642127 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
HCCAT5-202ENST00000642127 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
HCCAT5-202ENST00000642127 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
HCCAT5-202ENST00000642127 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
HCCAT5-202ENST00000642127 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
HCCAT5-202ENST00000642127 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
HCCAT5-202ENST00000642127 PROM2Q8N271 834 aa14.92□□□□□ -0.02
HCCAT5-202ENST00000642127 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
HCCAT5-202ENST00000642127 CHD1O14646 1710 aa14.92□□□□□ -0.02
HCCAT5-202ENST00000642127 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
HCCAT5-202ENST00000642127 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
HCCAT5-202ENST00000642127 GABBR2O75899 941 aa14.88□□□□□ -0.03
HCCAT5-202ENST00000642127 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
HCCAT5-202ENST00000642127 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
HCCAT5-202ENST00000642127 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
HCCAT5-202ENST00000642127 SOGA1O94964 1423 aa14.84□□□□□ -0.03
HCCAT5-202ENST00000642127 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
HCCAT5-202ENST00000642127 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
HCCAT5-202ENST00000642127 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
HCCAT5-202ENST00000642127 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
HCCAT5-202ENST00000642127 CUX1P39880 1505 aa14.82□□□□□ -0.04
HCCAT5-202ENST00000642127 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
HCCAT5-202ENST00000642127 FBXO3Q9UK99 471 aa14.77□□□□□ -0.05
HCCAT5-202ENST00000642127 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
HCCAT5-202ENST00000642127 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
HCCAT5-202ENST00000642127 LHX8Q68G74 356 aa14.73□□□□□ -0.05
HCCAT5-202ENST00000642127 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
HCCAT5-202ENST00000642127 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
HCCAT5-202ENST00000642127 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
HCCAT5-202ENST00000642127 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
HCCAT5-202ENST00000642127 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
HCCAT5-202ENST00000642127 CLASP1Q7Z460 1538 aa14.69□□□□□ -0.06
HCCAT5-202ENST00000642127 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
HCCAT5-202ENST00000642127 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
HCCAT5-202ENST00000642127 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
HCCAT5-202ENST00000642127 ABCA5Q8WWZ7 1642 aa14.62□□□□□ -0.07
HCCAT5-202ENST00000642127 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
HCCAT5-202ENST00000642127 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
HCCAT5-202ENST00000642127 FARP1Q9Y4F1 1045 aaPredicted RBP14.59□□□□□ -0.07
HCCAT5-202ENST00000642127 MIER1Q8N108 512 aa14.56□□□□□ -0.08
HCCAT5-202ENST00000642127 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
HCCAT5-202ENST00000642127 ADAMTS12P58397 1594 aa14.55□□□□□ -0.08
HCCAT5-202ENST00000642127 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
HCCAT5-202ENST00000642127 GRIN2AQ12879 1464 aa14.54□□□□□ -0.08
HCCAT5-202ENST00000642127 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
HCCAT5-202ENST00000642127 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
HCCAT5-202ENST00000642127 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
HCCAT5-202ENST00000642127 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.08
HCCAT5-202ENST00000642127 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
HCCAT5-202ENST00000642127 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
HCCAT5-202ENST00000642127 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
HCCAT5-202ENST00000642127 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
HCCAT5-202ENST00000642127 NUP160Q12769 1436 aa14.44□□□□□ -0.1
HCCAT5-202ENST00000642127 CLCN6P51797 869 aa14.41□□□□□ -0.1
HCCAT5-202ENST00000642127 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
HCCAT5-202ENST00000642127 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
HCCAT5-202ENST00000642127 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
HCCAT5-202ENST00000642127 ZNF579Q8NAF0 562 aaKnown RBP14.37□□□□□ -0.11
HCCAT5-202ENST00000642127 PRG4Q92954 1404 aaPredicted RBP14.37□□□□□ -0.11
HCCAT5-202ENST00000642127 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
HCCAT5-202ENST00000642127 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
HCCAT5-202ENST00000642127 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
HCCAT5-202ENST00000642127 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
HCCAT5-202ENST00000642127 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
HCCAT5-202ENST00000642127 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
HCCAT5-202ENST00000642127 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
HCCAT5-202ENST00000642127 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
HCCAT5-202ENST00000642127 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
HCCAT5-202ENST00000642127 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
HCCAT5-202ENST00000642127 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
HCCAT5-202ENST00000642127 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
HCCAT5-202ENST00000642127 CUL7Q14999 1698 aa14.23□□□□□ -0.13
HCCAT5-202ENST00000642127 IGF1RP08069 1367 aa14.22□□□□□ -0.13
HCCAT5-202ENST00000642127 ADCY10Q96PN6 1610 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms