RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
CASC19-229ENST00000641418 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
CASC19-229ENST00000641418 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
CASC19-229ENST00000641418 WDR62O43379 1518 aa19.46■□□□□ 0.71
CASC19-229ENST00000641418 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
CASC19-229ENST00000641418 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
CASC19-229ENST00000641418 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
CASC19-229ENST00000641418 AKT1S1Q96B36 256 aa19.24■□□□□ 0.67
CASC19-229ENST00000641418 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
CASC19-229ENST00000641418 VASPP50552 380 aaPredicted RBP19.19■□□□□ 0.66
CASC19-229ENST00000641418 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
CASC19-229ENST00000641418 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
CASC19-229ENST00000641418 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
CASC19-229ENST00000641418 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
CASC19-229ENST00000641418 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
CASC19-229ENST00000641418 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
CASC19-229ENST00000641418 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
CASC19-229ENST00000641418 SPDYE1Q8NFV5 336 aaPredicted RBP19.05■□□□□ 0.64
CASC19-229ENST00000641418 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
CASC19-229ENST00000641418 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
CASC19-229ENST00000641418 PLCD3Q8N3E9 789 aa18.93■□□□□ 0.62
CASC19-229ENST00000641418 RTN4Q9NQC3 1192 aaKnown RBP18.93■□□□□ 0.62
CASC19-229ENST00000641418 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
CASC19-229ENST00000641418 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
CASC19-229ENST00000641418 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
CASC19-229ENST00000641418 MIER1Q8N108 512 aa18.92■□□□□ 0.62
CASC19-229ENST00000641418 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
CASC19-229ENST00000641418 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
CASC19-229ENST00000641418 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
CASC19-229ENST00000641418 SOGA1O94964 1423 aa18.88■□□□□ 0.61
CASC19-229ENST00000641418 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
CASC19-229ENST00000641418 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
CASC19-229ENST00000641418 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
CASC19-229ENST00000641418 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
CASC19-229ENST00000641418 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
CASC19-229ENST00000641418 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
CASC19-229ENST00000641418 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
CASC19-229ENST00000641418 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
CASC19-229ENST00000641418 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
CASC19-229ENST00000641418 CUX1P39880 1505 aa18.78■□□□□ 0.6
CASC19-229ENST00000641418 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
CASC19-229ENST00000641418 PITPNM1O00562 1244 aa18.73■□□□□ 0.59
CASC19-229ENST00000641418 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
CASC19-229ENST00000641418 SPOCK2Q92563 424 aa18.72■□□□□ 0.59
CASC19-229ENST00000641418 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
CASC19-229ENST00000641418 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
CASC19-229ENST00000641418 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
CASC19-229ENST00000641418 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
CASC19-229ENST00000641418 CHD1O14646 1710 aa18.65■□□□□ 0.58
CASC19-229ENST00000641418 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
CASC19-229ENST00000641418 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
CASC19-229ENST00000641418 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
CASC19-229ENST00000641418 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
CASC19-229ENST00000641418 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
CASC19-229ENST00000641418 CREBZFQ9NS37 354 aa18.55■□□□□ 0.56
CASC19-229ENST00000641418 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CASC19-229ENST00000641418 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
CASC19-229ENST00000641418 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
CASC19-229ENST00000641418 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
CASC19-229ENST00000641418 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
CASC19-229ENST00000641418 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
CASC19-229ENST00000641418 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
CASC19-229ENST00000641418 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 PKD2Q13563 968 aa18.39■□□□□ 0.53
CASC19-229ENST00000641418 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
CASC19-229ENST00000641418 NUP160Q12769 1436 aa18.38■□□□□ 0.53
CASC19-229ENST00000641418 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
CASC19-229ENST00000641418 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
CASC19-229ENST00000641418 CIZ1Q9ULV3 898 aaPredicted RBP18.35■□□□□ 0.53
CASC19-229ENST00000641418 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
CASC19-229ENST00000641418 GSE1Q14687 1217 aa18.33■□□□□ 0.53
CASC19-229ENST00000641418 NUBP1P53384 320 aa18.32■□□□□ 0.52
CASC19-229ENST00000641418 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
CASC19-229ENST00000641418 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
CASC19-229ENST00000641418 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
CASC19-229ENST00000641418 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
CASC19-229ENST00000641418 JPH4Q96JJ6 628 aa18.27■□□□□ 0.51
CASC19-229ENST00000641418 FAM212AQ96EL1 285 aa18.26■□□□□ 0.51
CASC19-229ENST00000641418 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
CASC19-229ENST00000641418 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
CASC19-229ENST00000641418 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
CASC19-229ENST00000641418 PIP4P2Q8N4L2 257 aa18.22■□□□□ 0.51
CASC19-229ENST00000641418 IGF1RP08069 1367 aa18.22■□□□□ 0.51
CASC19-229ENST00000641418 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
CASC19-229ENST00000641418 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
CASC19-229ENST00000641418 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
CASC19-229ENST00000641418 RASEFQ8IZ41 740 aa18.14■□□□□ 0.49
CASC19-229ENST00000641418 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
CASC19-229ENST00000641418 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
CASC19-229ENST00000641418 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
CASC19-229ENST00000641418 RGL2O15211 777 aa18.03■□□□□ 0.48
CASC19-229ENST00000641418 CUL7Q14999 1698 aa18.02■□□□□ 0.48
CASC19-229ENST00000641418 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.47
CASC19-229ENST00000641418 CHRM1P11229 460 aaPredicted RBP18.02■□□□□ 0.47
CASC19-229ENST00000641418 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms