RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 IGF1RP08069 1367 aa19.66■□□□□ 0.74
PAX6-280ENST00000640872 TIAM1Q13009 1591 aa19.65■□□□□ 0.74
PAX6-280ENST00000640872 KCNH8Q96L42 1107 aa19.64■□□□□ 0.74
PAX6-280ENST00000640872 ITGAEP38570 1179 aa19.62■□□□□ 0.73
PAX6-280ENST00000640872 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
PAX6-280ENST00000640872 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
PAX6-280ENST00000640872 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
PAX6-280ENST00000640872 ANP32EQ9BTT0 268 aa19.56■□□□□ 0.72
PAX6-280ENST00000640872 LRRC9Q6ZRR7 1453 aa19.56■□□□□ 0.72
PAX6-280ENST00000640872 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
PAX6-280ENST00000640872 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
PAX6-280ENST00000640872 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
PAX6-280ENST00000640872 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
PAX6-280ENST00000640872 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
PAX6-280ENST00000640872 CFAP43Q8NDM7 1665 aa19.5■□□□□ 0.71
PAX6-280ENST00000640872 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
PAX6-280ENST00000640872 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
PAX6-280ENST00000640872 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
PAX6-280ENST00000640872 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
PAX6-280ENST00000640872 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
PAX6-280ENST00000640872 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
PAX6-280ENST00000640872 FKBP8Q14318 412 aa19.46■□□□□ 0.71
PAX6-280ENST00000640872 BCANQ96GW7 911 aa19.45■□□□□ 0.7
PAX6-280ENST00000640872 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
PAX6-280ENST00000640872 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
PAX6-280ENST00000640872 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
PAX6-280ENST00000640872 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
PAX6-280ENST00000640872 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.69
PAX6-280ENST00000640872 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
PAX6-280ENST00000640872 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
PAX6-280ENST00000640872 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
PAX6-280ENST00000640872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.36■□□□□ 0.69
PAX6-280ENST00000640872 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
PAX6-280ENST00000640872 NEFLP07196 543 aa19.33■□□□□ 0.69
PAX6-280ENST00000640872 FYCO1Q9BQS8 1478 aa19.32■□□□□ 0.68
PAX6-280ENST00000640872 ANP32CO43423 234 aa19.32■□□□□ 0.68
PAX6-280ENST00000640872 HIRIP3Q9BW71 556 aaPredicted RBP19.29■□□□□ 0.68
PAX6-280ENST00000640872 RBM19Q9Y4C8 960 aaKnown RBP19.29■□□□□ 0.68
PAX6-280ENST00000640872 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
PAX6-280ENST00000640872 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
PAX6-280ENST00000640872 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
PAX6-280ENST00000640872 CASKIN1Q8WXD9 1431 aa19.27■□□□□ 0.68
PAX6-280ENST00000640872 FHOD3Q2V2M9 1422 aa19.27■□□□□ 0.67
PAX6-280ENST00000640872 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
PAX6-280ENST00000640872 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
PAX6-280ENST00000640872 FGD6Q6ZV73 1430 aa19.23■□□□□ 0.67
PAX6-280ENST00000640872 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
PAX6-280ENST00000640872 TONSLQ96HA7 1378 aa19.22■□□□□ 0.67
PAX6-280ENST00000640872 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
PAX6-280ENST00000640872 CUL7Q14999 1698 aa19.21■□□□□ 0.67
PAX6-280ENST00000640872 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
PAX6-280ENST00000640872 HFM1A2PYH4 1435 aa19.19■□□□□ 0.66
PAX6-280ENST00000640872 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
PAX6-280ENST00000640872 KDM5BQ9UGL1 1544 aa19.17■□□□□ 0.66
PAX6-280ENST00000640872 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
PAX6-280ENST00000640872 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
PAX6-280ENST00000640872 PTPRKQ15262 1439 aa19.17■□□□□ 0.66
PAX6-280ENST00000640872 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
PAX6-280ENST00000640872 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
PAX6-280ENST00000640872 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
PAX6-280ENST00000640872 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
PAX6-280ENST00000640872 NAIPQ13075 1403 aa19.11■□□□□ 0.65
PAX6-280ENST00000640872 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
PAX6-280ENST00000640872 LRRIQ1Q96JM4 1722 aa19.09■□□□□ 0.65
PAX6-280ENST00000640872 MSH5O43196 834 aa19.08■□□□□ 0.65
PAX6-280ENST00000640872 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
PAX6-280ENST00000640872 MYOM3Q5VTT5 1437 aa19.06■□□□□ 0.64
PAX6-280ENST00000640872 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
PAX6-280ENST00000640872 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
PAX6-280ENST00000640872 SAMD9Q5K651 1589 aa19.05■□□□□ 0.64
PAX6-280ENST00000640872 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
PAX6-280ENST00000640872 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
PAX6-280ENST00000640872 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
PAX6-280ENST00000640872 WDR62O43379 1518 aa19.03■□□□□ 0.64
PAX6-280ENST00000640872 GRIN2BQ13224 1484 aa19.02■□□□□ 0.64
PAX6-280ENST00000640872 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.64
PAX6-280ENST00000640872 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.63
PAX6-280ENST00000640872 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
PAX6-280ENST00000640872 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
PAX6-280ENST00000640872 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
PAX6-280ENST00000640872 GCC2Q8IWJ2 1684 aa18.99■□□□□ 0.63
PAX6-280ENST00000640872 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
PAX6-280ENST00000640872 ERICH6BQ5W0A0 696 aa18.98■□□□□ 0.63
PAX6-280ENST00000640872 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
PAX6-280ENST00000640872 ARHGEF11O15085 1522 aa18.98■□□□□ 0.63
PAX6-280ENST00000640872 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
PAX6-280ENST00000640872 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
PAX6-280ENST00000640872 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
PAX6-280ENST00000640872 CNTLNQ9NXG0 1405 aa18.95■□□□□ 0.62
PAX6-280ENST00000640872 TCOF1Q13428 1488 aaKnown RBP18.94■□□□□ 0.62
PAX6-280ENST00000640872 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
PAX6-280ENST00000640872 AKNAQ7Z591 1439 aa18.92■□□□□ 0.62
PAX6-280ENST00000640872 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
PAX6-280ENST00000640872 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
PAX6-280ENST00000640872 PPP4R2Q9NY27 417 aa18.9■□□□□ 0.62
PAX6-280ENST00000640872 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.62
PAX6-280ENST00000640872 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
PAX6-280ENST00000640872 KDM6BO15054 1643 aa18.89■□□□□ 0.61
PAX6-280ENST00000640872 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
PAX6-280ENST00000640872 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms