RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
GFAP-238ENST00000640859 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
GFAP-238ENST00000640859 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
GFAP-238ENST00000640859 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
GFAP-238ENST00000640859 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
GFAP-238ENST00000640859 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
GFAP-238ENST00000640859 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
GFAP-238ENST00000640859 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
GFAP-238ENST00000640859 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
GFAP-238ENST00000640859 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
GFAP-238ENST00000640859 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
GFAP-238ENST00000640859 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
GFAP-238ENST00000640859 CUL7Q14999 1698 aa17.37■□□□□ 0.37
GFAP-238ENST00000640859 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
GFAP-238ENST00000640859 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
GFAP-238ENST00000640859 MSH5O43196 834 aa17.36■□□□□ 0.37
GFAP-238ENST00000640859 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
GFAP-238ENST00000640859 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
GFAP-238ENST00000640859 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
GFAP-238ENST00000640859 CHD1O14646 1710 aa17.32■□□□□ 0.36
GFAP-238ENST00000640859 TTBK1Q5TCY1 1321 aaPredicted RBP17.3■□□□□ 0.36
GFAP-238ENST00000640859 APLP2Q06481 763 aa17.28■□□□□ 0.36
GFAP-238ENST00000640859 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
GFAP-238ENST00000640859 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
GFAP-238ENST00000640859 NUP160Q12769 1436 aa17.22■□□□□ 0.35
GFAP-238ENST00000640859 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
GFAP-238ENST00000640859 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
GFAP-238ENST00000640859 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
GFAP-238ENST00000640859 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
GFAP-238ENST00000640859 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
GFAP-238ENST00000640859 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
GFAP-238ENST00000640859 KANK4Q5T7N3 995 aaPredicted RBP17.14■□□□□ 0.33
GFAP-238ENST00000640859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
GFAP-238ENST00000640859 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
GFAP-238ENST00000640859 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
GFAP-238ENST00000640859 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
GFAP-238ENST00000640859 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
GFAP-238ENST00000640859 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
GFAP-238ENST00000640859 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
GFAP-238ENST00000640859 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
GFAP-238ENST00000640859 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
GFAP-238ENST00000640859 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
GFAP-238ENST00000640859 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
GFAP-238ENST00000640859 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
GFAP-238ENST00000640859 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
GFAP-238ENST00000640859 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
GFAP-238ENST00000640859 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
GFAP-238ENST00000640859 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
GFAP-238ENST00000640859 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
GFAP-238ENST00000640859 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
GFAP-238ENST00000640859 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
GFAP-238ENST00000640859 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
GFAP-238ENST00000640859 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
GFAP-238ENST00000640859 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
GFAP-238ENST00000640859 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
GFAP-238ENST00000640859 FMN1Q68DA7 1419 aa17■□□□□ 0.31
GFAP-238ENST00000640859 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.3
GFAP-238ENST00000640859 PTPRGP23470 1445 aa16.94■□□□□ 0.3
GFAP-238ENST00000640859 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
GFAP-238ENST00000640859 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
GFAP-238ENST00000640859 KCNA4P22459 653 aa16.91■□□□□ 0.3
GFAP-238ENST00000640859 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
GFAP-238ENST00000640859 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
GFAP-238ENST00000640859 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
GFAP-238ENST00000640859 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
GFAP-238ENST00000640859 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
GFAP-238ENST00000640859 KIAA0556O60303 1618 aa16.87■□□□□ 0.29
GFAP-238ENST00000640859 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
GFAP-238ENST00000640859 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
GFAP-238ENST00000640859 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
GFAP-238ENST00000640859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
GFAP-238ENST00000640859 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
GFAP-238ENST00000640859 EHBP1L1Q8N3D4 1523 aa16.77■□□□□ 0.28
GFAP-238ENST00000640859 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
GFAP-238ENST00000640859 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
GFAP-238ENST00000640859 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
GFAP-238ENST00000640859 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
GFAP-238ENST00000640859 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
GFAP-238ENST00000640859 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
GFAP-238ENST00000640859 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
GFAP-238ENST00000640859 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
GFAP-238ENST00000640859 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
GFAP-238ENST00000640859 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
GFAP-238ENST00000640859 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
GFAP-238ENST00000640859 ITGAEP38570 1179 aa16.71■□□□□ 0.27
GFAP-238ENST00000640859 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
GFAP-238ENST00000640859 PLB1Q6P1J6 1458 aa16.7■□□□□ 0.26
GFAP-238ENST00000640859 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
GFAP-238ENST00000640859 MYOM3Q5VTT5 1437 aa16.69■□□□□ 0.26
GFAP-238ENST00000640859 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
GFAP-238ENST00000640859 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
GFAP-238ENST00000640859 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
GFAP-238ENST00000640859 RAB3GAP2Q9H2M9 1393 aa16.66■□□□□ 0.26
GFAP-238ENST00000640859 NUP153P49790 1475 aaKnown RBP16.66■□□□□ 0.26
GFAP-238ENST00000640859 ABCA8O94911 1581 aa16.65■□□□□ 0.26
GFAP-238ENST00000640859 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
GFAP-238ENST00000640859 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
GFAP-238ENST00000640859 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
GFAP-238ENST00000640859 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
GFAP-238ENST00000640859 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms