RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
RTTN-219ENST00000640525 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
RTTN-219ENST00000640525 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.02
RTTN-219ENST00000640525 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.03
RTTN-219ENST00000640525 FGD5Q6ZNL6 1462 aa8.65□□□□□ -1.03
RTTN-219ENST00000640525 THOC2Q8NI27 1593 aaKnown RBP8.64□□□□□ -1.03
RTTN-219ENST00000640525 OSCARQ8IYS5 282 aa8.64□□□□□ -1.03
RTTN-219ENST00000640525 FBLN2P98095 1184 aa8.63□□□□□ -1.03
RTTN-219ENST00000640525 RAD54L2Q9Y4B4 1467 aa8.63□□□□□ -1.03
RTTN-219ENST00000640525 WDR62O43379 1518 aa8.62□□□□□ -1.03
RTTN-219ENST00000640525 POLA1P09884 1462 aaPredicted RBP8.61□□□□□ -1.03
RTTN-219ENST00000640525 SOGA1O94964 1423 aa8.61□□□□□ -1.03
RTTN-219ENST00000640525 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
RTTN-219ENST00000640525 RUSC2Q8N2Y8 1516 aa8.6□□□□□ -1.03
RTTN-219ENST00000640525 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
RTTN-219ENST00000640525 CUX2O14529 1486 aa8.58□□□□□ -1.04
RTTN-219ENST00000640525 TDRD9Q8NDG6 1382 aaKnown RBP8.56□□□□□ -1.04
RTTN-219ENST00000640525 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
RTTN-219ENST00000640525 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
RTTN-219ENST00000640525 ZNF608Q9ULD9 1512 aaPredicted RBP8.54□□□□□ -1.04
RTTN-219ENST00000640525 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
RTTN-219ENST00000640525 ABCA10Q8WWZ4 1543 aa8.53□□□□□ -1.04
RTTN-219ENST00000640525 AQRO60306 1485 aaKnown RBP eCLIP8.53□□□□□ -1.04
RTTN-219ENST00000640525 KIF27Q86VH2 1401 aa8.52□□□□□ -1.05
RTTN-219ENST00000640525 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
RTTN-219ENST00000640525 LOC105371045A0A1W2PR82 267 aa8.51□□□□□ -1.05
RTTN-219ENST00000640525 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
RTTN-219ENST00000640525 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
RTTN-219ENST00000640525 RBM42Q9BTD8 480 aaKnown RBP8.48□□□□□ -1.05
RTTN-219ENST00000640525 IGF1RP08069 1367 aa8.48□□□□□ -1.05
RTTN-219ENST00000640525 ABCA5Q8WWZ7 1642 aa8.48□□□□□ -1.05
RTTN-219ENST00000640525 EEA1Q15075 1411 aa8.48□□□□□ -1.05
RTTN-219ENST00000640525 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
RTTN-219ENST00000640525 PROM2Q8N271 834 aa8.47□□□□□ -1.05
RTTN-219ENST00000640525 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
RTTN-219ENST00000640525 PBRM1Q86U86 1689 aa8.44□□□□□ -1.06
RTTN-219ENST00000640525 GRIN2BQ13224 1484 aa8.44□□□□□ -1.06
RTTN-219ENST00000640525 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
RTTN-219ENST00000640525 CARMIL1Q5VZK9 1371 aa8.43□□□□□ -1.06
RTTN-219ENST00000640525 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
RTTN-219ENST00000640525 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
RTTN-219ENST00000640525 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
RTTN-219ENST00000640525 SNAPC4Q5SXM2 1469 aa8.43□□□□□ -1.06
RTTN-219ENST00000640525 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
RTTN-219ENST00000640525 UBTFP17480 764 aaKnown RBP8.42□□□□□ -1.06
RTTN-219ENST00000640525 PRXQ9BXM0 1461 aa8.42□□□□□ -1.06
RTTN-219ENST00000640525 ERICH3Q5RHP9 1530 aa8.42□□□□□ -1.06
RTTN-219ENST00000640525 RANGAP1P46060 587 aaPredicted RBP8.4□□□□□ -1.06
RTTN-219ENST00000640525 KIF21BO75037 1637 aa8.39□□□□□ -1.07
RTTN-219ENST00000640525 GOLGA3Q08378 1498 aa8.39□□□□□ -1.07
RTTN-219ENST00000640525 ADAMTS12P58397 1594 aa8.39□□□□□ -1.07
RTTN-219ENST00000640525 CUL7Q14999 1698 aa8.39□□□□□ -1.07
RTTN-219ENST00000640525 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
RTTN-219ENST00000640525 FHAD1B1AJZ9 1412 aa8.38□□□□□ -1.07
RTTN-219ENST00000640525 MAGI1Q96QZ7 1491 aaPredicted RBP8.37□□□□□ -1.07
RTTN-219ENST00000640525 SYNJ2O15056 1496 aa8.35□□□□□ -1.07
RTTN-219ENST00000640525 GRIN2AQ12879 1464 aa8.34□□□□□ -1.07
RTTN-219ENST00000640525 TNIKQ9UKE5 1360 aa8.33□□□□□ -1.08
RTTN-219ENST00000640525 CHD1O14646 1710 aa8.33□□□□□ -1.08
RTTN-219ENST00000640525 CEP170Q5SW79 1584 aa8.31□□□□□ -1.08
RTTN-219ENST00000640525 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
RTTN-219ENST00000640525 CEP162Q5TB80 1403 aa8.29□□□□□ -1.08
RTTN-219ENST00000640525 P3H3Q8IVL6 736 aa8.29□□□□□ -1.08
RTTN-219ENST00000640525 CTTNBP2Q8WZ74 1663 aa8.28□□□□□ -1.08
RTTN-219ENST00000640525 REM2Q8IYK8 340 aaPredicted RBP8.28□□□□□ -1.08
RTTN-219ENST00000640525 NUP160Q12769 1436 aa8.27□□□□□ -1.09
RTTN-219ENST00000640525 CLIP1P30622 1438 aa8.27□□□□□ -1.09
RTTN-219ENST00000640525 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
RTTN-219ENST00000640525 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
RTTN-219ENST00000640525 KIAA0586Q9BVV6 1533 aa8.26□□□□□ -1.09
RTTN-219ENST00000640525 VASPP50552 380 aaPredicted RBP8.26□□□□□ -1.09
RTTN-219ENST00000640525 IFNLR1Q8IU57 520 aaPredicted RBP8.26□□□□□ -1.09
RTTN-219ENST00000640525 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
RTTN-219ENST00000640525 RTN4Q9NQC3 1192 aaKnown RBP8.24□□□□□ -1.09
RTTN-219ENST00000640525 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
RTTN-219ENST00000640525 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
RTTN-219ENST00000640525 CLEC11AQ9Y240 323 aa8.24□□□□□ -1.09
RTTN-219ENST00000640525 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
RTTN-219ENST00000640525 FHOD3Q2V2M9 1422 aa8.22□□□□□ -1.09
RTTN-219ENST00000640525 ARAP1Q96P48 1450 aa8.22□□□□□ -1.09
RTTN-219ENST00000640525 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.09
RTTN-219ENST00000640525 PITPNM1O00562 1244 aa8.21□□□□□ -1.1
RTTN-219ENST00000640525 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
RTTN-219ENST00000640525 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
RTTN-219ENST00000640525 DISP1Q96F81 1524 aa8.2□□□□□ -1.1
RTTN-219ENST00000640525 ERCC6L2Q5T890 1561 aa8.19□□□□□ -1.1
RTTN-219ENST00000640525 SAMD9Q5K651 1589 aa8.19□□□□□ -1.1
RTTN-219ENST00000640525 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
RTTN-219ENST00000640525 KIAA0556O60303 1618 aa8.18□□□□□ -1.1
RTTN-219ENST00000640525 EFCAB5A4FU69 1503 aa8.18□□□□□ -1.1
RTTN-219ENST00000640525 SHROOM2Q13796 1616 aa8.17□□□□□ -1.1
RTTN-219ENST00000640525 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
RTTN-219ENST00000640525 CARMIL2Q6F5E8 1435 aa8.17□□□□□ -1.1
RTTN-219ENST00000640525 ARID3CA6NKF2 412 aa8.16□□□□□ -1.1
RTTN-219ENST00000640525 MIER1Q8N108 512 aa8.16□□□□□ -1.1
RTTN-219ENST00000640525 VPS8Q8N3P4 1428 aa8.15□□□□□ -1.1
RTTN-219ENST00000640525 SPDYE1Q8NFV5 336 aaPredicted RBP8.15□□□□□ -1.11
RTTN-219ENST00000640525 PTPRGP23470 1445 aa8.13□□□□□ -1.11
RTTN-219ENST00000640525 PCF11O94913 1555 aaKnown RBP8.13□□□□□ -1.11
RTTN-219ENST00000640525 PLCD3Q8N3E9 789 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms